Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00367
         (670 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U64845-3|AAC48032.2|  312|Caenorhabditis elegans Hypothetical pr...    30   1.3  
Z81508-9|CAB04140.2|  310|Caenorhabditis elegans Hypothetical pr...    28   5.2  
AF022968-5|AAB69885.2| 1080|Caenorhabditis elegans Adenylyl cycl...    28   6.9  

>U64845-3|AAC48032.2|  312|Caenorhabditis elegans Hypothetical
           protein F45F2.11 protein.
          Length = 312

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 17/52 (32%), Positives = 29/52 (55%)
 Frame = +1

Query: 451 PEFLLPPISNFARSEAYVNFRIRKLVGVNILPISKASFSSPLKGYKNKQKTP 606
           P+F  PP  +F+R E +    +  ++ + + P+S +S  SP+   KN Q TP
Sbjct: 233 PQFFFPPSPHFSR-EPHSLPPMPMMLPIPLPPMSLSSPISPIHFQKNLQSTP 283


>Z81508-9|CAB04140.2|  310|Caenorhabditis elegans Hypothetical
           protein F20E11.2 protein.
          Length = 310

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 13/22 (59%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
 Frame = +1

Query: 85  FKHISFSCL-YKKESLNNKKSF 147
           F HI+F CL YKK SL +K S+
Sbjct: 25  FGHINFLCLTYKKPSLRSKSSY 46


>AF022968-5|AAB69885.2| 1080|Caenorhabditis elegans Adenylyl cyclase
           protein 2 protein.
          Length = 1080

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = +1

Query: 301 SIFFFSFLIITCLRLLVQNPE 363
           SIFF ++LI+TC  + ++ P+
Sbjct: 86  SIFFIAYLILTCFAIRIRQPK 106


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,463,804
Number of Sequences: 27780
Number of extensions: 256856
Number of successful extensions: 481
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 477
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 481
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)