BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00364X
(496 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein. 23 7.6
AY347952-1|AAR28375.1| 634|Anopheles gambiae putative sulfakini... 22 10.0
>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
Length = 1459
Score = 22.6 bits (46), Expect = 7.6
Identities = 12/41 (29%), Positives = 15/41 (36%)
Frame = +1
Query: 55 FCFQHRPLGHSRNGYDGINVTAAAGCN*AAPQRSSNKENPG 177
F +QH H NG G + S+K NPG
Sbjct: 1396 FSYQHPHPHHHHNGSGRSKPPGPEGVGGGGGKSPSDKHNPG 1436
>AY347952-1|AAR28375.1| 634|Anopheles gambiae putative sulfakinin
GPCR protein.
Length = 634
Score = 22.2 bits (45), Expect = 10.0
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -1
Query: 190 NCYRYRDSLYCCF 152
+CYR R + CCF
Sbjct: 539 SCYRNRMPICCCF 551
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 426,256
Number of Sequences: 2352
Number of extensions: 6927
Number of successful extensions: 3
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 43977336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -