Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00363X
         (590 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    25   2.4  
AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic acetylch...    25   2.4  
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       23   9.8  
AJ304410-1|CAC67443.1|  190|Anopheles gambiae calpain protein.         23   9.8  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    23   9.8  

>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 24.6 bits (51), Expect = 2.4
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +2

Query: 14  FSKMSETLKLRGTLRGHNGWVTQ 82
           F K+ E  ++   LRG+  W+TQ
Sbjct: 396 FQKLREKQQIEEDLRGYLDWITQ 418


>AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 8 protein.
          Length = 520

 Score = 24.6 bits (51), Expect = 2.4
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 554 MPDLDSSVPTTGYNN 510
           +PD D S P+ GY N
Sbjct: 367 LPDYDDSTPSNGYTN 381


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 5/33 (15%)
 Frame = +3

Query: 462 QRLGVMCQIL-----TQSCKPIIVSCGWDRTVK 545
           + L   C+IL     T +C P+I  C  +RT++
Sbjct: 69  RELDPCCEILRLYCDTSACPPLIEFCDAERTIR 101


>AJ304410-1|CAC67443.1|  190|Anopheles gambiae calpain protein.
          Length = 190

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 12/40 (30%), Positives = 18/40 (45%)
 Frame = -1

Query: 497 LGENLTHDTQSLCPSSWMVYLHSARVFQSLIVLSREPDTI 378
           LG N  HD +      WM Y    R F  + + +  PD++
Sbjct: 40  LGLNFDHDGEF-----WMSYRDFTRYFDRMEICNLSPDSL 74


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 9/27 (33%), Positives = 12/27 (44%)
 Frame = +3

Query: 492 TQSCKPIIVSCGWDRTVKVWHLTNCKL 572
           T SC P+   C     V+  H   C+L
Sbjct: 455 TPSCDPVTGVCSCKENVEGRHCRECRL 481


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 670,710
Number of Sequences: 2352
Number of extensions: 13667
Number of successful extensions: 86
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 86
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 86
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 56768445
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)