Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00363X
(590 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 25 0.73
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 25 0.73
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 25 0.73
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 24 0.97
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 23 3.0
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 23 3.0
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 23 3.0
DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 21 6.8
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 21 9.0
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 21 9.0
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 21 9.0
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 21 9.0
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 24.6 bits (51), Expect = 0.73
Identities = 7/25 (28%), Positives = 20/25 (80%)
Frame = -3
Query: 390 TRHYLTVVN*EGYREYILSMVLESS 316
+++Y+T+++ G+R++I +M+ +S
Sbjct: 10 SKYYVTIIDAPGHRDFIKNMITGTS 34
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 24.6 bits (51), Expect = 0.73
Identities = 7/25 (28%), Positives = 20/25 (80%)
Frame = -3
Query: 390 TRHYLTVVN*EGYREYILSMVLESS 316
+++Y+T+++ G+R++I +M+ +S
Sbjct: 26 SKYYVTIIDAPGHRDFIKNMITGTS 50
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 24.6 bits (51), Expect = 0.73
Identities = 7/25 (28%), Positives = 20/25 (80%)
Frame = -3
Query: 390 TRHYLTVVN*EGYREYILSMVLESS 316
+++Y+T+++ G+R++I +M+ +S
Sbjct: 83 SKYYVTIIDAPGHRDFIKNMITGTS 107
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 24.2 bits (50), Expect = 0.97
Identities = 7/24 (29%), Positives = 19/24 (79%)
Frame = -3
Query: 387 RHYLTVVN*EGYREYILSMVLESS 316
++Y+T+++ G+R++I +M+ +S
Sbjct: 84 KYYVTIIDAPGHRDFIKNMITGTS 107
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.6 bits (46), Expect = 3.0
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Frame = +2
Query: 113 ILSSSRDKTLIV---WKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNY-DFPVLGTRL 280
I+SS +KT+ +K + NNY K+LY + ++I + + Y +FP R
Sbjct: 81 IISSLSNKTIHNNNNYKYNYNNNNYNNNCKKLYYNINYIEQIPIPVPVYYGNFP---PRP 137
Query: 281 CVCGISLQARLP 316
IS+Q ++P
Sbjct: 138 MGPWISMQEQIP 149
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.6 bits (46), Expect = 3.0
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Frame = +2
Query: 113 ILSSSRDKTLIV---WKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNY-DFPVLGTRL 280
I+SS +KT+ +K + NNY K+LY + ++I + + Y +FP R
Sbjct: 81 IISSLSNKTIHNNNNYKYNYNNNNYNNNCKKLYYNINYIEQIPIPVPVYYGNFP---PRP 137
Query: 281 CVCGISLQARLP 316
IS+Q ++P
Sbjct: 138 MGPWISMQEQIP 149
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.6 bits (46), Expect = 3.0
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Frame = +2
Query: 113 ILSSSRDKTLIV---WKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNY-DFPVLGTRL 280
I+SS +KT+ +K + NNY K+LY + ++I + + Y +FP R
Sbjct: 81 IISSLSNKTIHNNNNYKYNYNNNNYNNNCKKLYYNINYIEQIPIPVPVYYGNFP---PRP 137
Query: 281 CVCGISLQARLP 316
IS+Q ++P
Sbjct: 138 MGPWISMQEQIP 149
>DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein.
Length = 495
Score = 21.4 bits (43), Expect = 6.8
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = -1
Query: 452 SWMVYLHSARVFQSLIVLSREPDTI*RLSTEKATESTSLVW 330
SW + +F L++L+ +++ LS + ST+L W
Sbjct: 2 SWQRVFLAVGLFGVLLLLTNADNSVHILSKYQLITSTTLNW 42
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.0 bits (42), Expect = 9.0
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -1
Query: 449 WMVYLHSARVFQSLIVLSRE 390
W++YLH + V +VL E
Sbjct: 424 WIIYLHISDVVADDLVLLEE 443
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.0 bits (42), Expect = 9.0
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -1
Query: 449 WMVYLHSARVFQSLIVLSRE 390
W++YLH + V +VL E
Sbjct: 424 WIIYLHISDVVADDLVLLEE 443
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 21.0 bits (42), Expect = 9.0
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = -1
Query: 428 ARVFQSLIVLSREPDTI*RLSTEKAT 351
A + Q+L L R PDT+ +++ + T
Sbjct: 886 ANLTQTLDKLIRSPDTLRKIAQNRGT 911
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 21.0 bits (42), Expect = 9.0
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -2
Query: 514 IMGLHDWVRI*HMTPNRCVH 455
+MG HD VR+ P R H
Sbjct: 356 VMGNHDRVRVGTRYPGRADH 375
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,935
Number of Sequences: 438
Number of extensions: 3825
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17237673
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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