Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00336
         (431 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U56080-1|AAB01209.1|  704|Drosophila melanogaster p21-activated ...    29   3.5  
U49446-1|AAC47094.1|  704|Drosophila melanogaster serine/threoni...    29   3.5  
BT010291-1|AAQ23609.1|  704|Drosophila melanogaster LD20767p pro...    29   3.5  
AE014297-447|AAN13373.1|  704|Drosophila melanogaster CG10295-PC...    29   3.5  
AE014297-446|AAF54132.1|  704|Drosophila melanogaster CG10295-PB...    29   3.5  
AE014297-445|AAF54131.1|  704|Drosophila melanogaster CG10295-PA...    29   3.5  

>U56080-1|AAB01209.1|  704|Drosophila melanogaster p21-activated
           protein kinase 1Dpak1 protein.
          Length = 704

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = -2

Query: 301 SLSIVTTATPPFKPKRLLLHGRNKQGG--GTYPRGLTRGPTTSNYA 170
           SLS V++++P   P    LHG N  G   G     +T GP  +N A
Sbjct: 163 SLSRVSSSSPSSTPTDSELHGSNSGGNLIGVQLGSMTLGPNANNVA 208


>U49446-1|AAC47094.1|  704|Drosophila melanogaster serine/threonine
           kinase PAK homologDPAK protein.
          Length = 704

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = -2

Query: 301 SLSIVTTATPPFKPKRLLLHGRNKQGG--GTYPRGLTRGPTTSNYA 170
           SLS V++++P   P    LHG N  G   G     +T GP  +N A
Sbjct: 163 SLSRVSSSSPSSTPTDSELHGSNSGGNLIGVQLGSMTLGPNANNVA 208


>BT010291-1|AAQ23609.1|  704|Drosophila melanogaster LD20767p
           protein.
          Length = 704

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = -2

Query: 301 SLSIVTTATPPFKPKRLLLHGRNKQGG--GTYPRGLTRGPTTSNYA 170
           SLS V++++P   P    LHG N  G   G     +T GP  +N A
Sbjct: 163 SLSRVSSSSPSSTPTDSELHGSNSGGNLIGVQLGSMTLGPNANNVA 208


>AE014297-447|AAN13373.1|  704|Drosophila melanogaster CG10295-PC,
           isoform C protein.
          Length = 704

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = -2

Query: 301 SLSIVTTATPPFKPKRLLLHGRNKQGG--GTYPRGLTRGPTTSNYA 170
           SLS V++++P   P    LHG N  G   G     +T GP  +N A
Sbjct: 163 SLSRVSSSSPSSTPTDSELHGSNSGGNLIGVQLGSMTLGPNANNVA 208


>AE014297-446|AAF54132.1|  704|Drosophila melanogaster CG10295-PB,
           isoform B protein.
          Length = 704

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = -2

Query: 301 SLSIVTTATPPFKPKRLLLHGRNKQGG--GTYPRGLTRGPTTSNYA 170
           SLS V++++P   P    LHG N  G   G     +T GP  +N A
Sbjct: 163 SLSRVSSSSPSSTPTDSELHGSNSGGNLIGVQLGSMTLGPNANNVA 208


>AE014297-445|AAF54131.1|  704|Drosophila melanogaster CG10295-PA,
           isoform A protein.
          Length = 704

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = -2

Query: 301 SLSIVTTATPPFKPKRLLLHGRNKQGG--GTYPRGLTRGPTTSNYA 170
           SLS V++++P   P    LHG N  G   G     +T GP  +N A
Sbjct: 163 SLSRVSSSSPSSTPTDSELHGSNSGGNLIGVQLGSMTLGPNANNVA 208


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,095,233
Number of Sequences: 53049
Number of extensions: 439124
Number of successful extensions: 954
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 934
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 954
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1355285490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)