Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00336
         (431 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g53330.1 68418.m06628 expressed protein                             27   5.5  
At1g79190.1 68414.m09233 expressed protein                             27   5.5  
At3g55180.1 68416.m06129 esterase/lipase/thioesterase family pro...    26   9.6  

>At5g53330.1 68418.m06628 expressed protein
          Length = 221

 Score = 27.1 bits (57), Expect = 5.5
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -2

Query: 238 RNKQGGGTYPRGLTRGPTTS 179
           RNK GG +YPR +   P+TS
Sbjct: 6   RNKSGGPSYPRPMYGPPSTS 25


>At1g79190.1 68414.m09233 expressed protein
          Length = 1274

 Score = 27.1 bits (57), Expect = 5.5
 Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
 Frame = +2

Query: 212 IGTTALLISAVKQ*SFRFEGWGSRCNYTETLELVSQGGWRVYVVD--VYGL 358
           +G    L+S V+   +  E W S CN T + +LV Q      +++  ++GL
Sbjct: 603 LGFVRKLVSEVRVKEYNGEDWQSWCNRTGSGQLVRQAATAACILNEMIFGL 653


>At3g55180.1 68416.m06129 esterase/lipase/thioesterase family
           protein low similarity to monoglyceride lipase from
           [Homo sapiens] GI:14594904, [Mus musculus] GI:2632162;
           contains Interpro entry IPR000379
          Length = 312

 Score = 26.2 bits (55), Expect = 9.6
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -1

Query: 332 RATHLEIQVLKSQYSYNGYPTLQT 261
           + TH+  QV  ++Y Y G P L+T
Sbjct: 181 KETHIRKQVRDNEYCYKGRPRLKT 204


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,879,005
Number of Sequences: 28952
Number of extensions: 203689
Number of successful extensions: 422
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 417
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 422
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 685039728
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)