Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00334X
         (425 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    24   0.71 
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   5.0  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    21   5.0  

>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 23.8 bits (49), Expect = 0.71
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = +2

Query: 269 GWRSNGFTCICLCTIRSAKWKARLHVHSC 355
           G  SNG  C CL T  SAK + +    SC
Sbjct: 182 GKASNGNKCCCLRTCSSAK-RPKFENSSC 209


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -2

Query: 181 CQSPTNQQYFQR 146
           CQ+ +N +YFQR
Sbjct: 200 CQTVSNFEYFQR 211


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -2

Query: 181 CQSPTNQQYFQR 146
           CQ+ +N +YFQR
Sbjct: 126 CQTVSNFEYFQR 137


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,148
Number of Sequences: 336
Number of extensions: 2544
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9490410
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)