Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00334X
(425 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0034 - 228939-229028,229117-229230,229309-229430,229827-23... 85 2e-17
04_03_0650 - 18411588-18411645,18412020-18412172,18412340-184124... 47 7e-06
04_04_1468 + 33811471-33811657,33811888-33811980,33812899-338130... 38 0.004
04_03_0565 + 17207582-17207811,17208026-17208320 31 0.51
02_05_0540 + 29852109-29852195,29852304-29852477,29852585-298528... 29 1.2
08_02_1145 - 24674319-24674403,24674691-24674746,24674885-246749... 29 1.6
02_04_0414 - 22685981-22686178,22686374-22686465,22686580-226866... 29 1.6
11_01_0433 - 3323372-3324616,3324708-3324905 28 2.7
06_03_0783 - 24546403-24546765,24547202-24547262,24547899-245480... 28 2.7
01_05_0108 + 18183250-18183336,18183451-18183962,18184074-181842... 28 2.7
05_05_0039 - 21782093-21782320,21782383-21782754,21783031-217834... 28 3.6
01_05_0320 - 20874691-20875230,20879337-20879590,20880014-208810... 28 3.6
10_01_0267 - 2828966-2829340,2831164-2831629,2833390-2833487,283... 27 6.3
07_03_0459 - 18422034-18422351 27 6.3
03_02_0338 + 7614199-7614450,7614518-7614703,7614815-7614927,761... 27 6.3
11_01_0307 + 2304500-2306023 27 8.3
07_03_1783 + 29480987-29481165,29481526-29481685,29481767-294818... 27 8.3
06_03_0468 - 21083754-21083869,21083986-21084069,21085633-210859... 27 8.3
02_02_0309 + 8833709-8834044,8834135-8834289,8834427-8834511,883... 27 8.3
01_06_1392 + 36995579-36996028,36997145-36997375 27 8.3
>05_01_0034 -
228939-229028,229117-229230,229309-229430,229827-230056,
230458-230537,230641-230859
Length = 284
Score = 85.4 bits (202), Expect = 2e-17
Identities = 39/86 (45%), Positives = 57/86 (66%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 IGTLLGTS-DKGVVEVTNCFCVPHKEHADQVEAELNYAMDVYELNRRVNSSESIVGWWAT 177
IGTLLG+ G V V N + VPH E DQV ++ Y ++Y + +VN E IVGW++T
Sbjct: 44 IGTLLGSVLPDGTVHVRNSYVVPHNESPDQVALDIEYHHNMYASHHKVNPKEVIVGWFST 103
Query: 178 GNEVTNHSSVIHEYYSRECREPVHVT 255
G V+ S++IH++YSRE + P+H+T
Sbjct: 104 GFGVSGGSTLIHDFYSREVQSPIHLT 129
>04_03_0650 -
18411588-18411645,18412020-18412172,18412340-18412407,
18412499-18412600,18412695-18412766,18412843-18412891,
18412971-18413104,18413488-18413554,18414471-18414574,
18414677-18414793,18415538-18415647,18415763-18415772
Length = 347
Score = 46.8 bits (106), Expect = 7e-06
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +1
Query: 4 GTLLGTSDKGVVEVTNCFCVPHKEHADQVEAE-LNYAMDVYELNRRVNSSESIVGWW 171
G LLG V+EVTNCF P +E ++ +A+ NY +++ R VN + VGW+
Sbjct: 59 GQLLGLDVGSVLEVTNCFPFPMREDDEEADADGANYQLEMMRCLREVNVDNNTVGWY 115
>04_04_1468 +
33811471-33811657,33811888-33811980,33812899-33813027,
33813089-33813166,33813377-33813435,33813522-33813644,
33814225-33814282,33814383-33814468,33814564-33814635
Length = 294
Score = 37.5 bits (83), Expect = 0.004
Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Frame = +1
Query: 1 IGTLLGTSDKGVVEVTNCFCVPHKEHADQVE---AELNYAMDVYELNRRVNS 147
+G LLGTS +G V+VTN + VP +E + NY ++ + +R+N+
Sbjct: 43 VGVLLGTSSRGSVDVTNSYAVPFEEDDKDPRIWFLDHNYHESMFSMFKRINA 94
>04_03_0565 + 17207582-17207811,17208026-17208320
Length = 174
Score = 30.7 bits (66), Expect = 0.51
Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 4/45 (8%)
Frame = +1
Query: 163 GWWATGNEVTNHSSVI----HEYYSRECREPVHVTWTLHWLEVEW 285
GWW + +V+ H + R+CR PV LHW V W
Sbjct: 80 GWWLVSGDRREIKAVLPREQHGVWRRQCRRPVQ----LHWWGVTW 120
>02_05_0540 +
29852109-29852195,29852304-29852477,29852585-29852841,
29852954-29853125,29853513-29853551,29853647-29853715,
29853795-29853911,29854190-29854401,29854578-29854736,
29854810-29855009,29855100-29855266,29855346-29855442,
29855560-29855651,29855861-29856139
Length = 706
Score = 29.5 bits (63), Expect = 1.2
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = -3
Query: 201 GVVGYFIASRPPTNNTFRGIDSSVQLVNIHRVIKF 97
G V + +AS+PP FR +++ Q+V I + +KF
Sbjct: 442 GSVNWKLASKPPIKLPFRKLENCNQVVKIGKELKF 476
>08_02_1145 -
24674319-24674403,24674691-24674746,24674885-24674965,
24675063-24675137,24675418-24675479,24675857-24675950,
24676674-24676762,24676864-24677194
Length = 290
Score = 29.1 bits (62), Expect = 1.6
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Frame = +1
Query: 4 GTLLGTSDKGVVEVTNCFCVPHKEHADQVEAELNYAM--DVYELNRRVNSSESIVGWWAT 177
G ++G VE+ N F + D V L+ A EL ++V ++GW++T
Sbjct: 71 GCVIGVQRGRTVEIFNSFELV----LDPVSGTLDRAFLEKKQELYKKVFPDFYVLGWYST 126
Query: 178 GNEVTNHSSVIHEYYSRECREPVHV 252
G++V + IH+ PV++
Sbjct: 127 GSDVRDTDMQIHKALMDINESPVYL 151
>02_04_0414 -
22685981-22686178,22686374-22686465,22686580-22686676,
22686801-22686916,22687314-22687513,22687588-22687740,
22687960-22688171,22688403-22688519,22688613-22688687,
22688815-22688853,22689518-22689689,22689809-22690056,
22690151-22690324,22690418-22690504
Length = 659
Score = 29.1 bits (62), Expect = 1.6
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = -3
Query: 201 GVVGYFIASRPPTNNTFRGIDSSVQLVNIHRVIKF 97
G+V + AS+PP FR +++ Q++ I + +KF
Sbjct: 439 GIVNWKQASKPPIIMPFRKVENGNQVIEIGKELKF 473
>11_01_0433 - 3323372-3324616,3324708-3324905
Length = 480
Score = 28.3 bits (60), Expect = 2.7
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = -3
Query: 141 DSSVQLVNIHRVIKFRFDLIGMFFVWHAEAVG 46
D++V L+ IH+ I F F ++FVW +A+G
Sbjct: 321 DAAVVLMLIHQFITFGFACTPLYFVWE-KAIG 351
>06_03_0783 -
24546403-24546765,24547202-24547262,24547899-24548004,
24548118-24551600,24553134-24553179
Length = 1352
Score = 28.3 bits (60), Expect = 2.7
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = -3
Query: 357 LQE*TCNLAFHLALLMVHKHMHVNPFDLQPVKCPGNMDRLTA 232
L E C+L +HL +L VH H D PV P N+D L++
Sbjct: 664 LPESLCSL-YHLQMLSVHPHSCF--MDTGPVIFPKNLDNLSS 702
>01_05_0108 +
18183250-18183336,18183451-18183962,18184074-18184245,
18184984-18185022,18185117-18185185,18185281-18185397,
18185842-18186056,18187085-18187240,18187328-18187527,
18187927-18188084,18188321-18188417,18188738-18188829,
18189018-18189191
Length = 695
Score = 28.3 bits (60), Expect = 2.7
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = -3
Query: 201 GVVGYFIASRPPTNNTFRGIDSSVQLVNIHRVIKF 97
G V + +A+RPP FR +++ Q++ I + +KF
Sbjct: 469 GSVNWKMANRPPIKLPFRKVENCNQVLKIGKELKF 503
>05_05_0039 -
21782093-21782320,21782383-21782754,21783031-21783496,
21784896-21784993,21785179-21785362,21785462-21785574,
21785942-21786127,21786191-21786364
Length = 606
Score = 27.9 bits (59), Expect = 3.6
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = -3
Query: 141 DSSVQLVNIHRVIKFRFDLIGMFFVWHAEAVG 46
D++V L+ IH+ I F F ++FVW +A+G
Sbjct: 311 DAAVILMLIHQFITFGFACTPLYFVWE-KAIG 341
>01_05_0320 -
20874691-20875230,20879337-20879590,20880014-20881087,
20881259-20881511,20881548-20882369
Length = 980
Score = 27.9 bits (59), Expect = 3.6
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +2
Query: 17 ARATKEWWK*PTASACHTKN-MPIKSK 94
A +KEWW +ACH N +P+K K
Sbjct: 508 AGLSKEWWGEAVLTACHVLNKIPMKHK 534
>10_01_0267 -
2828966-2829340,2831164-2831629,2833390-2833487,
2833782-2834078,2834287-2834694
Length = 547
Score = 27.1 bits (57), Expect = 6.3
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -3
Query: 141 DSSVQLVNIHRVIKFRFDLIGMFFVW 64
D++V L+ IH+ I F F ++FVW
Sbjct: 327 DAAVVLMLIHQFITFGFACTPLYFVW 352
>07_03_0459 - 18422034-18422351
Length = 105
Score = 27.1 bits (57), Expect = 6.3
Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = +2
Query: 299 CLCTIRSAKWKARLHVHSC-RCHSHV 373
CL S +W+ + VHSC R H HV
Sbjct: 12 CLGRQPSRRWRGPVSVHSCSRSHPHV 37
>03_02_0338 +
7614199-7614450,7614518-7614703,7614815-7614927,
7615023-7615206,7615343-7615440,7616113-7616578,
7617342-7617683
Length = 546
Score = 27.1 bits (57), Expect = 6.3
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -3
Query: 141 DSSVQLVNIHRVIKFRFDLIGMFFVW 64
D++V L+ IH+ I F F ++FVW
Sbjct: 337 DAAVVLMLIHQFITFGFACTPLYFVW 362
>11_01_0307 + 2304500-2306023
Length = 507
Score = 26.6 bits (56), Expect = 8.3
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -3
Query: 195 VGYFIASRPPTNNTFRGIDSSVQLV 121
VGYF RPP ++T RG+ + V
Sbjct: 423 VGYFKVRRPPRSSTRRGMSPGAKAV 447
>07_03_1783 +
29480987-29481165,29481526-29481685,29481767-29481862,
29481948-29482062,29482175-29482337,29482536-29482707,
29483924-29484013,29484137-29484598,29484675-29485268,
29485486-29485554,29485810-29485902,29486432-29486677,
29487277-29487417,29487748-29487828,29487911-29487973,
29488059-29488166,29488303-29488383,29488474-29488521,
29488979-29489053,29489973-29490068,29490156-29490236,
29490295-29490402,29490989-29491033,29491119-29491202,
29491379-29491482,29491581-29491728
Length = 1233
Score = 26.6 bits (56), Expect = 8.3
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +2
Query: 215 SITPVNAVSLSMLPGHFTGWRSNGFTCICLCTIRSAK-WKARL 340
S+ P +++ +PG F +S F CT SA+ W+ARL
Sbjct: 259 SLDPASSIIKVQVPGAFHALKS-AFAACLKCTHSSAEPWRARL 300
>06_03_0468 -
21083754-21083869,21083986-21084069,21085633-21085920,
21087525-21087687
Length = 216
Score = 26.6 bits (56), Expect = 8.3
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -3
Query: 306 HKHMHVNPFDLQPVKCPGNMDRLTAFTG 223
H H F+++P CPG M R + F G
Sbjct: 65 HDHPTSGVFEVEPKCCPGFMYRCSIFIG 92
>02_02_0309 +
8833709-8834044,8834135-8834289,8834427-8834511,
8835009-8835057,8835098-8835272,8835523-8835593,
8835723-8836351
Length = 499
Score = 26.6 bits (56), Expect = 8.3
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +2
Query: 254 PGHFTGWRSNGFTCICLCTIRSAKWK 331
PG G R++ FT ICL ++ W+
Sbjct: 438 PGSIEGIRNSPFTRICLANVKLFGWR 463
>01_06_1392 + 36995579-36996028,36997145-36997375
Length = 226
Score = 26.6 bits (56), Expect = 8.3
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -3
Query: 141 DSSVQLVNIHRVIKFRFDLIGMFFVW 64
D++V L+ IH+ I F F ++FVW
Sbjct: 54 DAAVILMLIHQFITFGFACTPLYFVW 79
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,324,857
Number of Sequences: 37544
Number of extensions: 285066
Number of successful extensions: 682
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 668
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 681
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 790518168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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