Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00334X
         (425 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z47808-5|CAA87773.1|  294|Caenorhabditis elegans Hypothetical pr...    65   2e-11
Z68760-4|CAE17822.1|  160|Caenorhabditis elegans Hypothetical pr...    30   0.80 
AF098501-10|AAC67405.3| 1744|Caenorhabditis elegans Mtm (myotubu...    28   3.2  
Z70286-2|CAA94290.1|  529|Caenorhabditis elegans Hypothetical pr...    27   4.3  
U49795-1|AAB03859.1|  673|Caenorhabditis elegans DNA-binding pro...    27   4.3  
U49794-1|AAB03858.1|  673|Caenorhabditis elegans lag-1 protein.        27   4.3  
AJ582071-1|CAE46541.1|  529|Caenorhabditis elegans flavin monoox...    27   4.3  
AF100663-8|AAM98006.1|  671|Caenorhabditis elegans Lin-12 and gl...    27   4.3  
AF100663-7|AAC68978.3|  673|Caenorhabditis elegans Lin-12 and gl...    27   4.3  
Z81508-6|CAB04147.1|  338|Caenorhabditis elegans Hypothetical pr...    27   7.4  
Z73899-2|CAA98074.1|  536|Caenorhabditis elegans Hypothetical pr...    27   7.4  
Z82070-7|CAB04909.1|  321|Caenorhabditis elegans Hypothetical pr...    26   9.8  
U39676-4|AAN60532.1| 2747|Caenorhabditis elegans Hypothetical pr...    26   9.8  

>Z47808-5|CAA87773.1|  294|Caenorhabditis elegans Hypothetical
           protein D2013.7 protein.
          Length = 294

 Score = 65.3 bits (152), Expect = 2e-11
 Identities = 26/80 (32%), Positives = 47/80 (58%)
 Frame = +1

Query: 1   IGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAELNYAMDVYELNRRVNSSESIVGWWATG 180
           +GTL+G  +KG ++VTNCF +P  E  D +E +  +   +    ++ + +E  VGW+ T 
Sbjct: 38  MGTLMGYYEKGSIQVTNCFAIPFNESNDDLEIDDQFNQQMISALKKTSPNEQPVGWFLTT 97

Query: 181 NEVTNHSSVIHEYYSRECRE 240
           +++T+   + H+YY R   E
Sbjct: 98  SDITSSCLIYHDYYVRVITE 117


>Z68760-4|CAE17822.1|  160|Caenorhabditis elegans Hypothetical
           protein F36H1.9 protein.
          Length = 160

 Score = 29.9 bits (64), Expect = 0.80
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +2

Query: 50  TASACHTKNMPIKSKRNLITRWMFTS 127
           T  ACHT  M +  K+N IT W +++
Sbjct: 55  TLVACHTLQMFLAEKKNTITHWKYST 80


>AF098501-10|AAC67405.3| 1744|Caenorhabditis elegans Mtm
            (myotubularin) family protein 5 protein.
          Length = 1744

 Score = 27.9 bits (59), Expect = 3.2
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = +2

Query: 299  CLCTIRSAKWKARLHVHSCRCHSH 370
            C CT    +W   +H   CR H H
Sbjct: 1556 CYCTNILTRWSKAVHCKKCRIHVH 1579


>Z70286-2|CAA94290.1|  529|Caenorhabditis elegans Hypothetical
           protein K08C7.5 protein.
          Length = 529

 Score = 27.5 bits (58), Expect = 4.3
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -2

Query: 91  RLDRHVLCVARRSSWLLPPLLCRSCP 14
           R+ + V  V RR +WL+P L  R  P
Sbjct: 205 RIAKQVYLVTRRGTWLIPKLETRGLP 230


>U49795-1|AAB03859.1|  673|Caenorhabditis elegans DNA-binding
           protein LAG-1 protein.
          Length = 673

 Score = 27.5 bits (58), Expect = 4.3
 Identities = 15/51 (29%), Positives = 22/51 (43%)
 Frame = +2

Query: 14  WARATKEWWK*PTASACHTKNMPIKSKRNLITRWMFTS*TEESIPLKVLLV 166
           W  AT       +  + H    P+   RN  T WMFT+ T   + + + LV
Sbjct: 593 WFGATPVETTFRSEESLHCSIPPVSQVRNEQTHWMFTNRTTGDVEVPISLV 643


>U49794-1|AAB03858.1|  673|Caenorhabditis elegans lag-1 protein.
          Length = 673

 Score = 27.5 bits (58), Expect = 4.3
 Identities = 15/51 (29%), Positives = 22/51 (43%)
 Frame = +2

Query: 14  WARATKEWWK*PTASACHTKNMPIKSKRNLITRWMFTS*TEESIPLKVLLV 166
           W  AT       +  + H    P+   RN  T WMFT+ T   + + + LV
Sbjct: 593 WFGATPVETTFRSEESLHCSIPPVSQVRNEQTHWMFTNRTTGDVEVPISLV 643


>AJ582071-1|CAE46541.1|  529|Caenorhabditis elegans flavin
           monooxygenase protein.
          Length = 529

 Score = 27.5 bits (58), Expect = 4.3
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -2

Query: 91  RLDRHVLCVARRSSWLLPPLLCRSCP 14
           R+ + V  V RR +WL+P L  R  P
Sbjct: 205 RIAKQVYLVTRRGTWLIPKLETRGLP 230


>AF100663-8|AAM98006.1|  671|Caenorhabditis elegans Lin-12 and glp-1
           phenotype protein1, isoform b protein.
          Length = 671

 Score = 27.5 bits (58), Expect = 4.3
 Identities = 15/51 (29%), Positives = 22/51 (43%)
 Frame = +2

Query: 14  WARATKEWWK*PTASACHTKNMPIKSKRNLITRWMFTS*TEESIPLKVLLV 166
           W  AT       +  + H    P+   RN  T WMFT+ T   + + + LV
Sbjct: 591 WFGATPVETTFRSEESLHCSIPPVSQVRNEQTHWMFTNRTTGDVEVPISLV 641


>AF100663-7|AAC68978.3|  673|Caenorhabditis elegans Lin-12 and glp-1
           phenotype protein1, isoform a protein.
          Length = 673

 Score = 27.5 bits (58), Expect = 4.3
 Identities = 15/51 (29%), Positives = 22/51 (43%)
 Frame = +2

Query: 14  WARATKEWWK*PTASACHTKNMPIKSKRNLITRWMFTS*TEESIPLKVLLV 166
           W  AT       +  + H    P+   RN  T WMFT+ T   + + + LV
Sbjct: 593 WFGATPVETTFRSEESLHCSIPPVSQVRNEQTHWMFTNRTTGDVEVPISLV 643


>Z81508-6|CAB04147.1|  338|Caenorhabditis elegans Hypothetical
           protein F20E11.10 protein.
          Length = 338

 Score = 26.6 bits (56), Expect = 7.4
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = +3

Query: 246 PCYLDTSLAGGRMGLRAYVCVPLGVP 323
           P  L T LAG  +GL  Y+ VP  VP
Sbjct: 75  PFLLATKLAGFSLGLAKYLSVPFIVP 100


>Z73899-2|CAA98074.1|  536|Caenorhabditis elegans Hypothetical
           protein ZK829.4 protein.
          Length = 536

 Score = 26.6 bits (56), Expect = 7.4
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +1

Query: 25  DKGVVEVTNCFCVPHKEHADQVEAELNYAMDVYE 126
           D G  EV   +   H EH    +  + Y++DV E
Sbjct: 103 DNGEFEVIEAWRAQHSEHRTPTKGGIRYSLDVCE 136


>Z82070-7|CAB04909.1|  321|Caenorhabditis elegans Hypothetical
           protein W04E12.8 protein.
          Length = 321

 Score = 26.2 bits (55), Expect = 9.8
 Identities = 14/46 (30%), Positives = 19/46 (41%)
 Frame = +2

Query: 194 TTPLLYTSITPVNAVSLSMLPGHFTGWRSNGFTCICLCTIRSAKWK 331
           TTP+  T  TP      + +P    GW     T  C     +AKW+
Sbjct: 160 TTPIPTTCPTPAPCPVKTCVPSCDQGWTYFAPTDFCYRVYHNAKWE 205


>U39676-4|AAN60532.1| 2747|Caenorhabditis elegans Hypothetical protein
            C23F12.1b protein.
          Length = 2747

 Score = 26.2 bits (55), Expect = 9.8
 Identities = 15/76 (19%), Positives = 32/76 (42%)
 Frame = +2

Query: 191  PTTPLLYTSITPVNAVSLSMLPGHFTGWRSNGFTCICLCTIRSAKWKARLHVHSCRCHSH 370
            P T   +++    N+ +      HF  ++    +C+C C +    +  ++HV      SH
Sbjct: 1956 PKTRASFSNNAEFNSPNSDKYSNHFQIFQIR--SCLCACFVLFIFFNFKIHVIFTTLSSH 2013

Query: 371  VL*T*DCRSASVPEEC 418
            ++   D +   +P  C
Sbjct: 2014 LISFIDPKGGPLPVRC 2029


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,063,983
Number of Sequences: 27780
Number of extensions: 239769
Number of successful extensions: 543
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 529
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 543
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 703342068
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)