Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00334X
         (425 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    24   0.82 
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    24   0.82 
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    22   2.5  
DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.              22   3.3  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    22   3.3  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   4.4  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   4.4  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   5.8  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   5.8  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.8 bits (49), Expect = 0.82
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = +2

Query: 191  PTTPLLYTSITPVNAVSLSMLPGHFTGWRSNGFT 292
            P+ P+LY + +  +++ L    GH  G    G+T
Sbjct: 1405 PSAPVLYVTSSTSSSILLHWKSGHNGGASLTGYT 1438


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.8 bits (49), Expect = 0.82
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = +2

Query: 191  PTTPLLYTSITPVNAVSLSMLPGHFTGWRSNGFT 292
            P+ P+LY + +  +++ L    GH  G    G+T
Sbjct: 1401 PSAPVLYVTSSTSSSILLHWKSGHNGGASLTGYT 1434


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -2

Query: 61  RRSSWLLPPLLCRSCPIRCR 2
           RRS  + PP    +CP+ C+
Sbjct: 333 RRSEPVEPPRRKNNCPLHCK 352


>DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +2

Query: 284 GFTCICLCTIRSAKWKARLHVHSCRC 361
           GF C+C+  +   + K RLH     C
Sbjct: 9   GF-CVCVGALTIEELKTRLHTEQSVC 33


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 103 NYAMDVYELNRRVNSSE 153
           NY  DVY+ N  V+S E
Sbjct: 7   NYYGDVYQWNHTVSSGE 23


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = +1

Query: 139 VNSSESIVGWWATGNEVTNHSSVIHEYYSR 228
           V SSE  + W A   E+   S ++  Y  R
Sbjct: 430 VKSSELSISWDAPITEIGGDSDLVERYEVR 459


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 11/38 (28%), Positives = 16/38 (42%)
 Frame = +2

Query: 200 PLLYTSITPVNAVSLSMLPGHFTGWRSNGFTCICLCTI 313
           P++   +  V AV    +P  F   +  GFT    C I
Sbjct: 823 PIMLIVVCTVYAVLTRKIPEAFNESKHIGFTMYTTCVI 860


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +2

Query: 218 ITPVNAVSLSMLPGHFTGWRSNGFTCICLCTI 313
           I+ V AV    +P +F   +  GFT    C I
Sbjct: 687 ISTVYAVKTRKIPENFNESKFIGFTMYTTCII 718


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +2

Query: 218 ITPVNAVSLSMLPGHFTGWRSNGFTCICLCTI 313
           I+ V AV    +P +F   +  GFT    C I
Sbjct: 777 ISTVYAVKTRKIPENFNESKFIGFTMYTTCII 808


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,971
Number of Sequences: 438
Number of extensions: 2791
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10997463
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)