Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00332X
(559 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62753 Cluster: 40S ribosomal protein S6; n=203; Eukary... 140 2e-32
UniRef50_A7SGC3 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 138 6e-32
UniRef50_P29327-2 Cluster: Isoform B of P29327 ; n=3; Drosophila... 138 1e-31
UniRef50_Q9U762 Cluster: 40S ribosomal protein S6; n=10; Culicim... 134 1e-30
UniRef50_UPI00005A146E Cluster: PREDICTED: similar to 40S riboso... 116 3e-25
UniRef50_A5K858 Cluster: 40S ribosomal protein S6, putative; n=5... 115 9e-25
UniRef50_A0CU37 Cluster: Chromosome undetermined scaffold_28, wh... 106 4e-22
UniRef50_A4VD76 Cluster: Putative uncharacterized protein; n=1; ... 104 1e-21
UniRef50_A0DEZ7 Cluster: Chromosome undetermined scaffold_48, wh... 97 3e-19
UniRef50_O15598 Cluster: Ribosomal protein S6; n=6; Entamoeba hi... 96 4e-19
UniRef50_Q9NE83 Cluster: 40S ribosomal protein S6; n=9; Trypanos... 94 2e-18
UniRef50_A2EFM7 Cluster: Ribosomal protein S6e, putative; n=2; T... 91 1e-17
UniRef50_Q98SA3 Cluster: 40S ribosomal protein S6; n=1; Guillard... 86 6e-16
UniRef50_Q7QSH4 Cluster: GLP_64_20707_19961; n=1; Giardia lambli... 78 1e-13
UniRef50_A2A3R7 Cluster: Ribosomal protein S6; n=1; Homo sapiens... 75 1e-12
UniRef50_Q8SRY0 Cluster: 40S ribosomal protein S6; n=1; Encephal... 56 7e-07
UniRef50_Q4V5Z5 Cluster: IP07914p; n=1; Drosophila melanogaster|... 52 9e-06
UniRef50_Q3LVW0 Cluster: Ribosomal protein S6; n=1; Bigelowiella... 42 0.013
UniRef50_Q2NGM7 Cluster: 30S ribosomal protein S6e; n=2; Methano... 38 0.16
UniRef50_Q8U3H8 Cluster: 30S ribosomal protein S6e; n=4; Archaea... 37 0.28
UniRef50_Q6LXY7 Cluster: 30S ribosomal protein S6e; n=4; Archaea... 37 0.28
UniRef50_Q5JDK8 Cluster: 30S ribosomal protein S6e; n=1; Thermoc... 37 0.37
UniRef50_Q01CM6 Cluster: Chromosome 03 contig 1, DNA sequence; n... 36 0.48
UniRef50_Q74MJ5 Cluster: 30S ribosomal protein S6e; n=1; Nanoarc... 35 1.1
UniRef50_O87614 Cluster: Transposase; n=4; Proteobacteria|Rep: T... 35 1.5
UniRef50_A0UBB5 Cluster: Putative uncharacterized protein; n=1; ... 34 2.0
UniRef50_UPI00015BAF12 Cluster: SSU ribosomal protein S6E; n=1; ... 34 2.6
UniRef50_Q9HMJ5 Cluster: 30S ribosomal protein S6e; n=6; Halobac... 34 2.6
UniRef50_O29739 Cluster: 30S ribosomal protein S6e; n=7; Euryarc... 34 2.6
UniRef50_Q98BV7 Cluster: Trimethylamine methyltransferase; MttB;... 33 3.4
UniRef50_A6L045 Cluster: Putative uncharacterized protein; n=1; ... 33 4.5
UniRef50_Q23YC1 Cluster: Putative uncharacterized protein; n=1; ... 33 4.5
UniRef50_A5DY27 Cluster: Putative uncharacterized protein; n=1; ... 33 4.5
UniRef50_Q4SJ28 Cluster: Chromosome 21 SCAF14577, whole genome s... 33 6.0
UniRef50_Q5P8D9 Cluster: Transposase, is4 family; n=1; Azoarcus ... 33 6.0
UniRef50_A2XSM9 Cluster: Putative uncharacterized protein; n=1; ... 33 6.0
UniRef50_A4HE40 Cluster: Putative uncharacterized protein; n=1; ... 32 7.9
UniRef50_Q0U1R8 Cluster: Predicted protein; n=1; Phaeosphaeria n... 32 7.9
>UniRef50_P62753 Cluster: 40S ribosomal protein S6; n=203;
Eukaryota|Rep: 40S ribosomal protein S6 - Homo sapiens
(Human)
Length = 249
Score = 140 bits (339), Expect = 2e-32
Identities = 70/102 (68%), Positives = 80/102 (78%), Gaps = 1/102 (0%)
Frame = +2
Query: 254 ANGHSCNRPLRDGERKRKLVRGCIVDANXSVLALVIVXKGAQEIPGLTDGNVPRRLGPKR 433
+ GHSC RP R GERKRK VRGCIVDAN SVL LVIV KG ++IPGLTD VPRRLGPKR
Sbjct: 78 SKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDIPGLTDTTVPRRLGPKR 137
Query: 434 ASKIRKLFNLSKEDDVRRYVVKRVLQPRNEK-KMLNPDIRHL 556
AS+IRKLFNLSKEDDVR+YVV++ L +K + P I+ L
Sbjct: 138 ASRIRKLFNLSKEDDVRQYVVRKPLNKEGKKPRTKAPKIQRL 179
Score = 128 bits (310), Expect = 7e-29
Identities = 57/77 (74%), Positives = 66/77 (85%)
Frame = +3
Query: 24 MKLNVSYPATGCQK*FEVVDEHKLRIFYEKRMVAEVEADQLGDEWEGYVLRVAGGNDKQG 203
MKLN+S+PATGCQK EV DE KLR FYEKRM EV AD LG+EW+GYV+R++GGNDKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 204 FPMKHGVLTNSRVRLLM 254
FPMK GVLT+ RVRLL+
Sbjct: 61 FPMKQGVLTHGRVRLLL 77
>UniRef50_A7SGC3 Cluster: Predicted protein; n=5; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 245
Score = 138 bits (335), Expect = 6e-32
Identities = 64/92 (69%), Positives = 74/92 (80%)
Frame = +2
Query: 254 ANGHSCNRPLRDGERKRKLVRGCIVDANXSVLALVIVXKGAQEIPGLTDGNVPRRLGPKR 433
+ GHSC RP R GERKRK VRGCIVD+ SVL+LVIV KG Q+IPGLTD +PRRLGPKR
Sbjct: 78 SKGHSCYRPRRTGERKRKSVRGCIVDSQLSVLSLVIVKKGEQDIPGLTDNTIPRRLGPKR 137
Query: 434 ASKIRKLFNLSKEDDVRRYVVKRVLQPRNEKK 529
KIRK+FNLSKEDDVR+YV++R L + KK
Sbjct: 138 VGKIRKMFNLSKEDDVRQYVIRRPLPEKEGKK 169
Score = 123 bits (297), Expect = 2e-27
Identities = 52/77 (67%), Positives = 62/77 (80%)
Frame = +3
Query: 24 MKLNVSYPATGCQK*FEVVDEHKLRIFYEKRMVAEVEADQLGDEWEGYVLRVAGGNDKQG 203
MKLN+SYP TGCQK E+ DE K+R FY+KRM EV + LGDEW+GYV R+ GGNDKQG
Sbjct: 1 MKLNISYPVTGCQKLIEIEDERKVRSFYDKRMAMEVSGECLGDEWKGYVFRITGGNDKQG 60
Query: 204 FPMKHGVLTNSRVRLLM 254
FPMK G++TN RVRLL+
Sbjct: 61 FPMKQGIMTNGRVRLLL 77
>UniRef50_P29327-2 Cluster: Isoform B of P29327 ; n=3; Drosophila
melanogaster|Rep: Isoform B of P29327 - Drosophila
melanogaster (Fruit fly)
Length = 200
Score = 138 bits (333), Expect = 1e-31
Identities = 63/79 (79%), Positives = 70/79 (88%)
Frame = +3
Query: 24 MKLNVSYPATGCQK*FEVVDEHKLRIFYEKRMVAEVEADQLGDEWEGYVLRVAGGNDKQG 203
MKLNVSYPATGCQK FEVVDEHKLR+FYEKRM VEAD LGDEW+GY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 204 FPMKHGVLTNSRVRLLMQM 260
FPMK GVLT+ R+RLL ++
Sbjct: 61 FPMKQGVLTHGRLRLLKKI 79
Score = 52.0 bits (119), Expect = 9e-06
Identities = 37/92 (40%), Positives = 48/92 (52%)
Frame = +2
Query: 263 HSCNRPLRDGERKRKLVRGCIVDANXSVLALVIVXKGAQEIPGLTDGNVPRRLGPKRASK 442
HSC P + RK K VR V+AN S L LV++ K P RLGP R+S
Sbjct: 80 HSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS----------PCRLGPVRSSN 129
Query: 443 IRKLFNLSKEDDVRRYVVKRVLQPRNEKKMLN 538
I K++ L +EDD V+ LQ R++KK N
Sbjct: 130 ISKIYYLCEEDD---EVIPVKLQRRHQKKRQN 158
>UniRef50_Q9U762 Cluster: 40S ribosomal protein S6; n=10;
Culicimorpha|Rep: 40S ribosomal protein S6 - Aedes
albopictus (Forest day mosquito)
Length = 349
Score = 134 bits (324), Expect = 1e-30
Identities = 64/90 (71%), Positives = 73/90 (81%)
Frame = +2
Query: 260 GHSCNRPLRDGERKRKLVRGCIVDANXSVLALVIVXKGAQEIPGLTDGNVPRRLGPKRAS 439
GHSC RP R GERKRK VRGCIVD N S LAL++V KG ++IPGLTD V RRLGPKRAS
Sbjct: 80 GHSCYRPRRTGERKRKSVRGCIVDQNLSALALIVVKKGEKDIPGLTDTTVLRRLGPKRAS 139
Query: 440 KIRKLFNLSKEDDVRRYVVKRVLQPRNEKK 529
IRKL+NL+KEDDVR+YVVKR L ++ KK
Sbjct: 140 NIRKLYNLTKEDDVRQYVVKRPLPEKDGKK 169
Score = 134 bits (323), Expect = 2e-30
Identities = 59/78 (75%), Positives = 70/78 (89%)
Frame = +3
Query: 24 MKLNVSYPATGCQK*FEVVDEHKLRIFYEKRMVAEVEADQLGDEWEGYVLRVAGGNDKQG 203
MKLNVS+PATG QK FEV+D+HKLR FY+KRM AE+ AD LGDEW+GYV ++AGGNDKQG
Sbjct: 1 MKLNVSFPATGAQKTFEVMDDHKLRHFYDKRMGAEITADHLGDEWKGYVFKIAGGNDKQG 60
Query: 204 FPMKHGVLTNSRVRLLMQ 257
FPMK GVLTN+RVRLL++
Sbjct: 61 FPMKQGVLTNTRVRLLLK 78
>UniRef50_UPI00005A146E Cluster: PREDICTED: similar to 40S ribosomal
protein S6; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S6 - Canis familiaris
Length = 154
Score = 116 bits (280), Expect = 3e-25
Identities = 50/78 (64%), Positives = 63/78 (80%)
Frame = +3
Query: 24 MKLNVSYPATGCQK*FEVVDEHKLRIFYEKRMVAEVEADQLGDEWEGYVLRVAGGNDKQG 203
MKLN+S+PATGCQK E DE K R FYEK M +EV AD LG+EW+GY++R++GGNDKQG
Sbjct: 1 MKLNISFPATGCQKLIEADDERKPRTFYEKHMASEVAADALGEEWKGYMVRISGGNDKQG 60
Query: 204 FPMKHGVLTNSRVRLLMQ 257
FPMK VLT+ R+ LL++
Sbjct: 61 FPMKQDVLTHDRIHLLLR 78
Score = 64.9 bits (151), Expect = 1e-09
Identities = 30/52 (57%), Positives = 39/52 (75%)
Frame = +2
Query: 377 QEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLQPRNEKKM 532
++IPGLTD PR +GPKRAS+IRKLFNLSKEDD + + R ++ R K+M
Sbjct: 80 KDIPGLTDTTEPRHVGPKRASRIRKLFNLSKEDDAAQNSILRKIRKRIYKRM 131
>UniRef50_A5K858 Cluster: 40S ribosomal protein S6, putative; n=5;
Plasmodium|Rep: 40S ribosomal protein S6, putative -
Plasmodium vivax
Length = 391
Score = 115 bits (276), Expect = 9e-25
Identities = 53/99 (53%), Positives = 68/99 (68%)
Frame = +2
Query: 260 GHSCNRPLRDGERKRKLVRGCIVDANXSVLALVIVXKGAQEIPGLTDGNVPRRLGPKRAS 439
G C RP + GE++RK VRGCIV + S L L +V KG EIPGLTD V ++LGPKRA+
Sbjct: 121 GMKCYRPRKKGEKRRKSVRGCIVGQDLSALNLTLVKKGTNEIPGLTDKAVGKKLGPKRAT 180
Query: 440 KIRKLFNLSKEDDVRRYVVKRVLQPRNEKKMLNPDIRHL 556
KIRKLFNL K DDVR+YV+ R + + + + P I+ L
Sbjct: 181 KIRKLFNLDKTDDVRKYVIGRAISKNGKNRFIKPKIQRL 219
Score = 93.5 bits (222), Expect = 3e-18
Identities = 45/78 (57%), Positives = 54/78 (69%)
Frame = +3
Query: 24 MKLNVSYPATGCQK*FEVVDEHKLRIFYEKRMVAEVEADQLGDEWEGYVLRVAGGNDKQG 203
MKLN+S P QK E+ DE KL F EKR+ V D +G+E+ GYV R+ GGNDKQG
Sbjct: 42 MKLNISNPLNNVQKSIEIDDEKKLLPFMEKRIGNVVPGDSIGEEFLGYVFRITGGNDKQG 101
Query: 204 FPMKHGVLTNSRVRLLMQ 257
FPM GVLTN+RVRLL +
Sbjct: 102 FPMMQGVLTNNRVRLLFK 119
>UniRef50_A0CU37 Cluster: Chromosome undetermined scaffold_28, whole
genome shotgun sequence; n=6; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_28,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 315
Score = 106 bits (254), Expect = 4e-22
Identities = 47/78 (60%), Positives = 60/78 (76%)
Frame = +3
Query: 24 MKLNVSYPATGCQK*FEVVDEHKLRIFYEKRMVAEVEADQLGDEWEGYVLRVAGGNDKQG 203
MK N+SYP TG QK E+ D+ K IF++KRM VEAD LG+E++GYVL++ GGNDKQG
Sbjct: 1 MKFNISYPLTGAQKTVEIDDDKKCSIFFDKRMGQVVEADNLGEEYKGYVLKITGGNDKQG 60
Query: 204 FPMKHGVLTNSRVRLLMQ 257
FPM+ GVL RVR+LM+
Sbjct: 61 FPMRQGVLFKGRVRILMR 78
Score = 99.1 bits (236), Expect = 6e-20
Identities = 52/103 (50%), Positives = 67/103 (65%), Gaps = 4/103 (3%)
Frame = +2
Query: 260 GHSCNRPLRDGERKRKLVRGCIVDANXSVLALVIVXKGAQEIPGLTDGNVPRRLGPKRAS 439
GH RP +DGE KRK +RGCIV + VLAL +V KGA EI GLTD NVPRRLGPKR +
Sbjct: 80 GHKGYRPRKDGEMKRKSIRGCIVGQDIRVLALQVVKKGANEIAGLTDQNVPRRLGPKRLT 139
Query: 440 KIRKLFNLSKEDD---VRRYVVKRVLQPRNEKKMLN-PDIRHL 556
K+R+LF K D V++ +++R ++ KK P I+ L
Sbjct: 140 KLRRLFGFKKADGVAIVQKNLIRRTWTTKDGKKRQKAPKIQRL 182
>UniRef50_A4VD76 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 293
Score = 104 bits (250), Expect = 1e-21
Identities = 46/77 (59%), Positives = 57/77 (74%)
Frame = +3
Query: 24 MKLNVSYPATGCQK*FEVVDEHKLRIFYEKRMVAEVEADQLGDEWEGYVLRVAGGNDKQG 203
MK N+SYP TG QK E+ D+ K IF +K+M EVE D LGDE++GYV ++AGGNDK G
Sbjct: 1 MKFNISYPLTGAQKCIEIDDDKKCNIFMDKKMGQEVEGDTLGDEFKGYVFKIAGGNDKDG 60
Query: 204 FPMKHGVLTNSRVRLLM 254
FPMK GV+ RVRLL+
Sbjct: 61 FPMKQGVMVRGRVRLLL 77
Score = 95.5 bits (227), Expect = 7e-19
Identities = 52/105 (49%), Positives = 65/105 (61%), Gaps = 4/105 (3%)
Frame = +2
Query: 254 ANGHSCNRPLRDGERKRKLVRGCIVDANXSVLALVIVXKGAQEIPGLTDGNVPRRLGPKR 433
+ GHSC R G RKRK VRGCIV + VLAL IV KG EI GLT +PR+LGPKR
Sbjct: 78 SEGHSCFTSRRSGFRKRKSVRGCIVGPDMRVLALQIVKKGVAEIDGLTTVTLPRKLGPKR 137
Query: 434 ASKIRKLFNLSKEDD---VRRYVVKRVLQPRNEKKMLN-PDIRHL 556
A+ I+KLF L KEDD +++ V++R + K P I+ L
Sbjct: 138 ANNIKKLFGLKKEDDPILIKKSVIRRTFKTAKGKDRTKCPKIQRL 182
>UniRef50_A0DEZ7 Cluster: Chromosome undetermined scaffold_48, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_48,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 304
Score = 96.7 bits (230), Expect = 3e-19
Identities = 46/74 (62%), Positives = 53/74 (71%)
Frame = +2
Query: 260 GHSCNRPLRDGERKRKLVRGCIVDANXSVLALVIVXKGAQEIPGLTDGNVPRRLGPKRAS 439
GH RP +DGE KRK +RGCIV + VLAL +V KGA EI GLTD NVPRRLGPKR +
Sbjct: 85 GHKGYRPRKDGEMKRKSIRGCIVGQDIRVLALQVVKKGANEIAGLTDQNVPRRLGPKRLT 144
Query: 440 KIRKLFNLSKEDDV 481
K+R+LF K D V
Sbjct: 145 KLRRLFGFKKADRV 158
>UniRef50_O15598 Cluster: Ribosomal protein S6; n=6; Entamoeba
histolytica|Rep: Ribosomal protein S6 - Entamoeba
histolytica
Length = 162
Score = 96.3 bits (229), Expect = 4e-19
Identities = 43/80 (53%), Positives = 61/80 (76%)
Frame = +2
Query: 263 HSCNRPLRDGERKRKLVRGCIVDANXSVLALVIVXKGAQEIPGLTDGNVPRRLGPKRASK 442
+ C +PLR+GER+RK VRG IV + SVL ++V KG EI G+T+ +P R GP+RAS
Sbjct: 80 NGCYKPLRNGERRRKTVRGAIVAGDISVLNTIVVKKGEGEIEGVTNDALPMRAGPQRASH 139
Query: 443 IRKLFNLSKEDDVRRYVVKR 502
RKLFNLS++DDV+++V++R
Sbjct: 140 FRKLFNLSQKDDVKKFVIRR 159
Score = 91.5 bits (217), Expect = 1e-17
Identities = 42/76 (55%), Positives = 56/76 (73%)
Frame = +3
Query: 27 KLNVSYPATGCQK*FEVVDEHKLRIFYEKRMVAEVEADQLGDEWEGYVLRVAGGNDKQGF 206
K+NV+YPATG K F+ +E R F +KR+ EV+A LGDE++GY+L++ GG DK GF
Sbjct: 1 KINVAYPATGRIKKFDFEEEKNYRPFLDKRIGQEVDASSLGDEFKGYILKITGGCDKDGF 60
Query: 207 PMKHGVLTNSRVRLLM 254
PM GV TN+RVRLL+
Sbjct: 61 PMMTGVATNNRVRLLL 76
>UniRef50_Q9NE83 Cluster: 40S ribosomal protein S6; n=9;
Trypanosomatidae|Rep: 40S ribosomal protein S6 -
Leishmania major
Length = 249
Score = 94.3 bits (224), Expect = 2e-18
Identities = 46/90 (51%), Positives = 66/90 (73%), Gaps = 1/90 (1%)
Frame = +2
Query: 290 GERKRKLVRGCIVDANXSVLALVIVXKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSK 469
GER+RK VRGC++ ++ +++ + I G Q I G+TD PRRLGPKRASKIRKLFNLS+
Sbjct: 93 GERRRKNVRGCVLASDIALVNVTISKVGDQPIEGVTDTTAPRRLGPKRASKIRKLFNLSR 152
Query: 470 EDDVRRYVV-KRVLQPRNEKKMLNPDIRHL 556
+DVR+YVV +RV++ + ++ P I+ L
Sbjct: 153 TEDVRKYVVRRRVVKSGKKDRLKAPKIQRL 182
Score = 74.9 bits (176), Expect = 1e-12
Identities = 37/79 (46%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Frame = +3
Query: 24 MKLNVSYPATGCQK*FEVVDEHKLRI-FYEKRMVAEVEADQLGDEWEGYVLRVAGGNDKQ 200
MKLN++YP G K FE+ DE R+ + R+ EV+ G E++GY+ R+ GG+DK
Sbjct: 1 MKLNIAYPRNGTVKQFEISDEVLRRVQLQDYRLGNEVDGAIFGSEFKGYIFRLRGGSDKD 60
Query: 201 GFPMKHGVLTNSRVRLLMQ 257
GFPM GVL +SRV LL++
Sbjct: 61 GFPMVPGVLASSRVSLLVK 79
>UniRef50_A2EFM7 Cluster: Ribosomal protein S6e, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein S6e,
putative - Trichomonas vaginalis G3
Length = 216
Score = 91.5 bits (217), Expect = 1e-17
Identities = 47/100 (47%), Positives = 64/100 (64%), Gaps = 1/100 (1%)
Frame = +2
Query: 260 GHSCNRPLRDGERKRKLVRGCIVDANXSVLALVIVXKGAQEIPGLTDGNVPRRLGPKRAS 439
G SC RP +DGERKRK VRGCI+ S L V++ KG +EI GLT VPRR GPKRAS
Sbjct: 80 GASCYRPRKDGERKRKTVRGCIISDEISALHCVVLQKGEKEIDGLTTTAVPRRFGPKRAS 139
Query: 440 KIRKLFNLS-KEDDVRRYVVKRVLQPRNEKKMLNPDIRHL 556
+R +F ++ + D + V+KR ++P K +P ++ L
Sbjct: 140 TLRAMFGITDSKFDASKLVLKREVKP---GKFTSPKVQRL 176
Score = 81.8 bits (193), Expect = 1e-14
Identities = 34/78 (43%), Positives = 54/78 (69%)
Frame = +3
Query: 24 MKLNVSYPATGCQK*FEVVDEHKLRIFYEKRMVAEVEADQLGDEWEGYVLRVAGGNDKQG 203
M++ ++YP G Q ++ D L YEKR+ ++E ++LG +++GY+ R+ GG DKQG
Sbjct: 1 MRITLAYPENGTQVVVDIDDPAALNALYEKRVGQDIEGEKLGGQFKGYLFRIGGGFDKQG 60
Query: 204 FPMKHGVLTNSRVRLLMQ 257
FPMK GV+T R+RLL++
Sbjct: 61 FPMKQGVITPRRIRLLLK 78
>UniRef50_Q98SA3 Cluster: 40S ribosomal protein S6; n=1; Guillardia
theta|Rep: 40S ribosomal protein S6 - Guillardia theta
(Cryptomonas phi)
Length = 209
Score = 85.8 bits (203), Expect = 6e-16
Identities = 35/78 (44%), Positives = 55/78 (70%)
Frame = +3
Query: 24 MKLNVSYPATGCQK*FEVVDEHKLRIFYEKRMVAEVEADQLGDEWEGYVLRVAGGNDKQG 203
MK N++ P+TG Q E+ DE KLRI Y K++ ++++ +G EW+ + + GG DKQG
Sbjct: 1 MKFNIANPSTGVQHTIEIDDEDKLRILYGKKLTSKIDGKIIGKEWDKSIFIITGGQDKQG 60
Query: 204 FPMKHGVLTNSRVRLLMQ 257
FPMK G+L+ SRV++L++
Sbjct: 61 FPMKEGILSPSRVKILLK 78
Score = 56.8 bits (131), Expect = 3e-07
Identities = 30/84 (35%), Positives = 51/84 (60%)
Frame = +2
Query: 281 LRDGERKRKLVRGCIVDANXSVLALVIVXKGAQEIPGLTDGNVPRRLGPKRASKIRKLFN 460
++ GER RK VRGCIV SVL + ++ ++ +T+ N + L KR+S +RK+
Sbjct: 89 MKKGERCRKSVRGCIVSPEISVLNIKLLTNKNDDLL-ITNKNSEKTLTHKRSSNLRKVLC 147
Query: 461 LSKEDDVRRYVVKRVLQPRNEKKM 532
L+K DD+R++ +K +N+ K+
Sbjct: 148 LTKTDDIRKHYIKIAKDFKNKVKI 171
>UniRef50_Q7QSH4 Cluster: GLP_64_20707_19961; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_64_20707_19961 - Giardia lamblia
ATCC 50803
Length = 248
Score = 78.2 bits (184), Expect = 1e-13
Identities = 38/68 (55%), Positives = 48/68 (70%)
Frame = +2
Query: 260 GHSCNRPLRDGERKRKLVRGCIVDANXSVLALVIVXKGAQEIPGLTDGNVPRRLGPKRAS 439
G C R+GERKRK +RGCIV + L++V+V G + +PGLTD VP+RL PKRAS
Sbjct: 86 GAKCYLHRRNGERKRKSIRGCIVGPDLHALSVVLVDAGDKTLPGLTDVVVPKRLVPKRAS 145
Query: 440 KIRKLFNL 463
KIR+LF L
Sbjct: 146 KIRRLFGL 153
Score = 71.7 bits (168), Expect = 1e-11
Identities = 33/77 (42%), Positives = 46/77 (59%)
Frame = +3
Query: 27 KLNVSYPATGCQK*FEVVDEHKLRIFYEKRMVAEVEADQLGDEWEGYVLRVAGGNDKQGF 206
K+N+S P TG K + D K + + RM +E + LG+E+ G R+ GGND QGF
Sbjct: 8 KVNISNPVTGANKSLMIEDFRKSQTIHGLRMASEFDGAALGEEYAGCTFRITGGNDAQGF 67
Query: 207 PMKHGVLTNSRVRLLMQ 257
PM GVL + R RLL++
Sbjct: 68 PMYQGVLKSQRARLLLR 84
>UniRef50_A2A3R7 Cluster: Ribosomal protein S6; n=1; Homo
sapiens|Rep: Ribosomal protein S6 - Homo sapiens (Human)
Length = 91
Score = 74.9 bits (176), Expect = 1e-12
Identities = 33/46 (71%), Positives = 37/46 (80%)
Frame = +3
Query: 24 MKLNVSYPATGCQK*FEVVDEHKLRIFYEKRMVAEVEADQLGDEWE 161
MKLN+S+PATGCQK EV DE KLR FYEKRM EV AD LG+EW+
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWK 46
>UniRef50_Q8SRY0 Cluster: 40S ribosomal protein S6; n=1;
Encephalitozoon cuniculi|Rep: 40S ribosomal protein S6 -
Encephalitozoon cuniculi
Length = 203
Score = 55.6 bits (128), Expect = 7e-07
Identities = 35/107 (32%), Positives = 53/107 (49%)
Frame = +2
Query: 233 QPCSSSDANGHSCNRPLRDGERKRKLVRGCIVDANXSVLALVIVXKGAQEIPGLTDGNVP 412
+P S G+ C R G R+RK VRG IV VL L+I+ G +EI GLT+
Sbjct: 59 RPLLSKGDAGYRCRRK---GVRRRKSVRGSIVSEEICVLNLIILRPGEKEIDGLTNAVND 115
Query: 413 RRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLQPRNEKKMLNPDIRH 553
P++ K+RK+F + E+ ++ +L+ + P IRH
Sbjct: 116 VSHLPRKEKKLRKMFGVPDEEKNVVGYIRNILKSECDDPKKIPKIRH 162
Score = 55.2 bits (127), Expect = 1e-06
Identities = 25/62 (40%), Positives = 42/62 (67%)
Frame = +3
Query: 69 FEVVDEHKLRIFYEKRMVAEVEADQLGDEWEGYVLRVAGGNDKQGFPMKHGVLTNSRVRL 248
FE+ +++R+ Y+K++ + + LG+E+EG ++ + GG+D QGFPM G LT RVR
Sbjct: 2 FEIERRNEVRL-YDKKIGDQFDGGILGEEFEGTIMEITGGDDYQGFPMVSGHLTKKRVRP 60
Query: 249 LM 254
L+
Sbjct: 61 LL 62
>UniRef50_Q4V5Z5 Cluster: IP07914p; n=1; Drosophila
melanogaster|Rep: IP07914p - Drosophila melanogaster
(Fruit fly)
Length = 147
Score = 52.0 bits (119), Expect = 9e-06
Identities = 37/92 (40%), Positives = 48/92 (52%)
Frame = +2
Query: 263 HSCNRPLRDGERKRKLVRGCIVDANXSVLALVIVXKGAQEIPGLTDGNVPRRLGPKRASK 442
HSC P + RK K VR V+AN S L LV++ K P RLGP R+S
Sbjct: 27 HSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS----------PCRLGPVRSSN 76
Query: 443 IRKLFNLSKEDDVRRYVVKRVLQPRNEKKMLN 538
I K++ L +EDD V+ LQ R++KK N
Sbjct: 77 ISKIYYLCEEDD---EVIPVKLQRRHQKKRQN 105
>UniRef50_Q3LVW0 Cluster: Ribosomal protein S6; n=1; Bigelowiella
natans|Rep: Ribosomal protein S6 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 239
Score = 41.5 bits (93), Expect = 0.013
Identities = 27/94 (28%), Positives = 51/94 (54%)
Frame = +3
Query: 24 MKLNVSYPATGCQK*FEVVDEHKLRIFYEKRMVAEVEADQLGDEWEGYVLRVAGGNDKQG 203
MK+N++ P G Q + DE I K + +E LG+++ + GG+DKQG
Sbjct: 1 MKINIADPILGTQYSIKRDDEFIEHIIGRK-IGDTIEGSILGEDFSRNEFLINGGHDKQG 59
Query: 204 FPMKHGVLTNSRVRLLMQMATHVTDRSAMERENV 305
F +K + T R+++ ++ + + +RS +R+N+
Sbjct: 60 FLLKKNLNTFERLKINVKKGS-LGNRSHFKRKNL 92
>UniRef50_Q2NGM7 Cluster: 30S ribosomal protein S6e; n=2;
Methanobacteriaceae|Rep: 30S ribosomal protein S6e -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 130
Score = 37.9 bits (84), Expect = 0.16
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = +3
Query: 159 EGYVLRVAGGNDKQGFPMKHGVLTNSRVRLLMQMAT 266
+GY LR+ GG+DK GFPMK V R + L+ T
Sbjct: 43 KGYKLRITGGSDKNGFPMKEDVDGTRRFKSLVNGGT 78
>UniRef50_Q8U3H8 Cluster: 30S ribosomal protein S6e; n=4;
Archaea|Rep: 30S ribosomal protein S6e - Pyrococcus
furiosus
Length = 125
Score = 37.1 bits (82), Expect = 0.28
Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 9/102 (8%)
Frame = +3
Query: 18 AVMKLNVSYPATGCQK*FEVVDEHKLRIFYEKRMVAEVEADQL--------GDEW-EGYV 170
A KL +S P +G K E+ ++ KR+ ++ A +L G E+ E
Sbjct: 2 ATFKLVISDPKSGIAKQVEITGAETEKLI-GKRIGDQIPAKELNINLNELFGKEFPEDVK 60
Query: 171 LRVAGGNDKQGFPMKHGVLTNSRVRLLMQMATHVTDRSAMER 296
L + GG DK GFPM+ + RVR+L+ + ER
Sbjct: 61 LEIRGGTDKDGFPMRPDIHGPRRVRVLLSKGPGFRPKEKGER 102
>UniRef50_Q6LXY7 Cluster: 30S ribosomal protein S6e; n=4;
Archaea|Rep: 30S ribosomal protein S6e - Methanococcus
maripaludis
Length = 124
Score = 37.1 bits (82), Expect = 0.28
Identities = 14/35 (40%), Positives = 25/35 (71%)
Frame = +3
Query: 153 EWEGYVLRVAGGNDKQGFPMKHGVLTNSRVRLLMQ 257
E EGY L++ GG+D+ GF M+H + ++R+L++
Sbjct: 40 ELEGYKLKITGGSDRCGFAMRHDIHGAMKMRVLLK 74
>UniRef50_Q5JDK8 Cluster: 30S ribosomal protein S6e; n=1;
Thermococcus kodakarensis KOD1|Rep: 30S ribosomal
protein S6e - Pyrococcus kodakaraensis (Thermococcus
kodakaraensis)
Length = 125
Score = 36.7 bits (81), Expect = 0.37
Identities = 31/102 (30%), Positives = 45/102 (44%), Gaps = 9/102 (8%)
Frame = +3
Query: 18 AVMKLNVSYPATGCQK*FEVVDEHKLRIFYEKRMVAEVEADQLG---DEWEGYV------ 170
A KL +S P G K E+ ++ +R+ E+ A +LG E G
Sbjct: 2 ATFKLVISNPKNGVAKQVEISGPEADKLI-GRRIGEEIPASELGLNLSEIFGEEIPADAK 60
Query: 171 LRVAGGNDKQGFPMKHGVLTNSRVRLLMQMATHVTDRSAMER 296
L++ GG DK GFPM+ V RV++L+ R ER
Sbjct: 61 LKITGGTDKDGFPMRPDVHGPRRVKILLSRGPGFRPRERGER 102
>UniRef50_Q01CM6 Cluster: Chromosome 03 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 03 contig 1, DNA
sequence - Ostreococcus tauri
Length = 211
Score = 36.3 bits (80), Expect = 0.48
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = -3
Query: 254 HQKTNTAVCQDAMFHRESLLVVAASDTKYIALPFI 150
H++ +T V Q A+ H E+LLVV D + ++LPF+
Sbjct: 177 HEQEHTLVRQHALLHAEALLVVTTHDLEDVSLPFL 211
>UniRef50_Q74MJ5 Cluster: 30S ribosomal protein S6e; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S6e -
Nanoarchaeum equitans
Length = 126
Score = 35.1 bits (77), Expect = 1.1
Identities = 22/69 (31%), Positives = 38/69 (55%)
Frame = +3
Query: 18 AVMKLNVSYPATGCQK*FEVVDEHKLRIFYEKRMVAEVEADQLGDEWEGYVLRVAGGNDK 197
+V+K+ VS P +G E + L Y K++ ++ ++G +GY L++ GG+D
Sbjct: 5 SVVKIVVSDPKSGKAIQIETKEPQWL---YGKKIGDTIDGSKIG--LDGYELKITGGSDI 59
Query: 198 QGFPMKHGV 224
GFPM+ V
Sbjct: 60 AGFPMRKEV 68
>UniRef50_O87614 Cluster: Transposase; n=4; Proteobacteria|Rep:
Transposase - Pseudomonas aeruginosa
Length = 388
Score = 34.7 bits (76), Expect = 1.5
Identities = 30/117 (25%), Positives = 42/117 (35%), Gaps = 1/117 (0%)
Frame = -2
Query: 381 SWAPLXTITRAKTEXLASTIHPRTNLRFLSPSRSGLLHEWPFASEDEHGCLSGRHVSSGI 202
+WA + R T + S R S S + + WP GC S+
Sbjct: 28 AWASPWRVLRWITVCIISGWPARALSTLTSSSAARAMSRWPKGCRTRCGCSVAHRASTAA 87
Query: 201 LACRCRQRHEVHSPPIH-RLTDQPLLRRPCAFRKRYEACARPPLRTTSGIPLPGTKR 34
ACR R + I R+T + +L C+ R A P+RT L T R
Sbjct: 88 TACRRRSAISNATATISPRVTKRSVLTTECSLR---ATTAALPMRTAPSRALTATSR 141
>UniRef50_A0UBB5 Cluster: Putative uncharacterized protein; n=1;
Burkholderia multivorans ATCC 17616|Rep: Putative
uncharacterized protein - Burkholderia multivorans ATCC
17616
Length = 165
Score = 34.3 bits (75), Expect = 2.0
Identities = 28/93 (30%), Positives = 40/93 (43%), Gaps = 8/93 (8%)
Frame = +2
Query: 200 RIPDET----WRPD----KQPCSSSDANGHSCNRPLRDGERKRKLVRGCIVDANXSVLAL 355
R+P+E +RPD C+ A GH+ R R R R+ GC +DA L
Sbjct: 49 RVPEEIGQHEFRPDVVGQHVQCAGHGAVGHAEQRRGRHRRRYRREHAGCGIDAERRERRL 108
Query: 356 VIVXKGAQEIPGLTDGNVPRRLGPKRASKIRKL 454
+ A P RR+GP RA +++ L
Sbjct: 109 TDASRRAVRAPLRRPVGARRRVGPCRARRMKDL 141
>UniRef50_UPI00015BAF12 Cluster: SSU ribosomal protein S6E; n=1;
Ignicoccus hospitalis KIN4/I|Rep: SSU ribosomal protein
S6E - Ignicoccus hospitalis KIN4/I
Length = 236
Score = 33.9 bits (74), Expect = 2.6
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +3
Query: 63 K*FEV-VDEHKLRIFYEKRMVAEVEADQLGDEW-EGYVLRVAGGNDKQGFPMKHGVLTNS 236
K F++ ++ R F KR+ V A LG E +G L + GG+D+ GFPM+ +
Sbjct: 133 KAFQITIEGENARKFIGKRIGETVPASILGIETLKGLQLEIRGGSDESGFPMRPDIPGPV 192
Query: 237 RVRLLM 254
+ R L+
Sbjct: 193 KKRALL 198
>UniRef50_Q9HMJ5 Cluster: 30S ribosomal protein S6e; n=6;
Halobacteriaceae|Rep: 30S ribosomal protein S6e -
Halobacterium salinarium (Halobacterium halobium)
Length = 131
Score = 33.9 bits (74), Expect = 2.6
Identities = 25/96 (26%), Positives = 44/96 (45%)
Frame = +3
Query: 18 AVMKLNVSYPATGCQK*FEVVDEHKLRIFYEKRMVAEVEADQLGDEWEGYVLRVAGGNDK 197
A ++ V+ P +G FEV D F + + A V+ +G +GY + + GG+D
Sbjct: 2 ATFQVAVADPESGRTYQFEV-DGQDANRFIGREIGAAVDGGAVG--LDGYTVEITGGSDD 58
Query: 198 QGFPMKHGVLTNSRVRLLMQMATHVTDRSAMERENV 305
G PM+ V + + +L++ ER+ V
Sbjct: 59 AGRPMREDVDGSDLMEVLLEGGAGFNPDEDGERKRV 94
>UniRef50_O29739 Cluster: 30S ribosomal protein S6e; n=7;
Euryarchaeota|Rep: 30S ribosomal protein S6e -
Archaeoglobus fulgidus
Length = 129
Score = 33.9 bits (74), Expect = 2.6
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +3
Query: 114 RMVAEVEADQLGDEWEGYVLRVAGGNDKQGFPMKHGVLTNSRVRLLM 254
+ + +V + + D Y L++ GG D+ GFPM+ + +R RLL+
Sbjct: 31 KQIGDVISGTIVDLPPDYELKITGGTDRDGFPMRPDLPGTARRRLLL 77
>UniRef50_Q98BV7 Cluster: Trimethylamine methyltransferase; MttB;
n=20; Bacteria|Rep: Trimethylamine methyltransferase;
MttB - Rhizobium loti (Mesorhizobium loti)
Length = 564
Score = 33.5 bits (73), Expect = 3.4
Identities = 16/68 (23%), Positives = 28/68 (41%)
Frame = -2
Query: 360 ITRAKTEXLASTIHPRTNLRFLSPSRSGLLHEWPFASEDEHGCLSGRHVSSGILACRCRQ 181
+ +A E LA ++ + + P + WPF S+ G +SG +L C Q
Sbjct: 326 VVQAVAEVLAGLVY----VNAIKPGHPAIFGTWPFVSDLRTGAMSGGSAEQAVLTAACAQ 381
Query: 180 RHEVHSPP 157
+ + P
Sbjct: 382 MAQFYDLP 389
>UniRef50_A6L045 Cluster: Putative uncharacterized protein; n=1;
Bacteroides vulgatus ATCC 8482|Rep: Putative
uncharacterized protein - Bacteroides vulgatus (strain
ATCC 8482 / DSM 1447 / NCTC 11154)
Length = 541
Score = 33.1 bits (72), Expect = 4.5
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = +2
Query: 353 LVIVXKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYV 493
L+ V +EI LT GNVP+ + R ++RK NLS EDD+ Y+
Sbjct: 494 LLRVNLSTKEISMLT-GNVPKTINMNRY-RLRKSLNLSSEDDLTDYL 538
>UniRef50_Q23YC1 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 1188
Score = 33.1 bits (72), Expect = 4.5
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +2
Query: 326 VDANXSVLALVIVXKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRV 505
++A + A + A+EI P ++ +K +LFN +DD+ + + V
Sbjct: 33 LEAKNIIKAFIQTENDAEEIKSKALNKKPSYWKDQKDNKTDQLFNRKLDDDIELALERDV 92
Query: 506 -LQPRNEKKMLNPDIRHLR 559
QP + +LN ++RH +
Sbjct: 93 PKQPEKDNVLLNMELRHAK 111
>UniRef50_A5DY27 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 593
Score = 33.1 bits (72), Expect = 4.5
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = -2
Query: 384 ISWAPLXTITRAKTEXLAS--TIHPRTNLRFLSPSRSGLLHEWPFASEDE 241
+ W PL ++ +T+ + + TIHP L F G ++ W FAS+DE
Sbjct: 115 VDWLPLQSLHSFQTQSIVNCVTIHPVLPLVFCG-CNDGSIYVWNFASDDE 163
>UniRef50_Q4SJ28 Cluster: Chromosome 21 SCAF14577, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 21 SCAF14577, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 406
Score = 32.7 bits (71), Expect = 6.0
Identities = 28/89 (31%), Positives = 37/89 (41%)
Frame = -2
Query: 297 LSPSRSGLLHEWPFASEDEHGCLSGRHVSSGILACRCRQRHEVHSPPIHRLTDQPLLRRP 118
L P + LL + P E G GR SG C +RH H PP+ R + +P
Sbjct: 278 LRPGKGRLLLQLPRPPVGERGDPEGRRGQSGAGGRGC-ERHAAHLPPLQRRLVRRSELQP 336
Query: 117 CAFRKRYEACARPPLRTTSGIPLPGTKRL 31
+ R C L+ SG L G K+L
Sbjct: 337 QVHKPRGAGCGLRHLQ-RSGF-LAGEKQL 363
>UniRef50_Q5P8D9 Cluster: Transposase, is4 family; n=1; Azoarcus sp.
EbN1|Rep: Transposase, is4 family - Azoarcus sp. (strain
EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 364
Score = 32.7 bits (71), Expect = 6.0
Identities = 26/69 (37%), Positives = 34/69 (49%)
Frame = +3
Query: 45 PATGCQK*FEVVDEHKLRIFYEKRMVAEVEADQLGDEWEGYVLRVAGGNDKQGFPMKHGV 224
P G ++ FE D I Y +R VAE +L DE+ G +RV GG G M GV
Sbjct: 297 PRGGMKEEFEPADA----IRYNERTVAERSNARLKDEFGGNTVRVKGGTKVMGHLM-FGV 351
Query: 225 LTNSRVRLL 251
L S +L+
Sbjct: 352 LALSADQLM 360
>UniRef50_A2XSM9 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 212
Score = 32.7 bits (71), Expect = 6.0
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Frame = -2
Query: 168 HSPPIHRLTDQPLLRRPCAFRKRYEACARPPL-RTTSGIPLPGTKRLTS*L--RSIPSN 1
HSPP RL P+LRR A ++ C L R +S +PL ++L + L S+P+N
Sbjct: 90 HSPPSIRLLMPPVLRRYFASLPSFDTCRYQGLMRDSSKLPLFDLRKLNASLPVASVPNN 148
>UniRef50_A4HE40 Cluster: Putative uncharacterized protein; n=1;
Leishmania braziliensis|Rep: Putative uncharacterized
protein - Leishmania braziliensis
Length = 909
Score = 32.3 bits (70), Expect = 7.9
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +2
Query: 233 QPCSSSDANGHSCNRPLRDGERKRKLVRGCIVDANXSVLA 352
QPC +SDAN HS +R R R+ G + DA V A
Sbjct: 811 QPCKASDANSHSVSR--RRSRHCRQSTGGAVRDARHDVAA 848
>UniRef50_Q0U1R8 Cluster: Predicted protein; n=1; Phaeosphaeria
nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
(Septoria nodorum)
Length = 393
Score = 32.3 bits (70), Expect = 7.9
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +1
Query: 409 TPPSRSQTCFQNP*AVQP*QRR*CT-SLCRQTRAPAKERKENAKPRHKAPK 558
TP + QT Q P P + T S ++ +APAK E KPR APK
Sbjct: 317 TPSKKLQTLRQRPNPQLPVNPKQTTPSADKENKAPAKTEAEKKKPRKLAPK 367
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 572,736,032
Number of Sequences: 1657284
Number of extensions: 11571189
Number of successful extensions: 34194
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 33065
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34170
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 37071859483
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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