Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00332X
         (559 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     24   0.77 
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    24   0.77 
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           24   0.77 
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    24   1.0  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    23   1.8  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    21   7.2  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   7.2  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    21   9.5  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   9.5  

>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 24.2 bits (50), Expect = 0.77
 Identities = 13/43 (30%), Positives = 19/43 (44%)
 Frame = -2

Query: 183 QRHEVHSPPIHRLTDQPLLRRPCAFRKRYEACARPPLRTTSGI 55
           Q H  H PPIH     P+L       +      +PP+ ++S I
Sbjct: 88  QLHSHHGPPIHHQIRPPILHDTQPMCESLN--TQPPVTSSSNI 128


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 24.2 bits (50), Expect = 0.77
 Identities = 13/43 (30%), Positives = 19/43 (44%)
 Frame = -2

Query: 183 QRHEVHSPPIHRLTDQPLLRRPCAFRKRYEACARPPLRTTSGI 55
           Q H  H PPIH     P+L       +      +PP+ ++S I
Sbjct: 88  QLHSHHGPPIHHQIRPPILHDTQPMCESLN--TQPPVTSSSNI 128


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 24.2 bits (50), Expect = 0.77
 Identities = 13/43 (30%), Positives = 19/43 (44%)
 Frame = -2

Query: 183 QRHEVHSPPIHRLTDQPLLRRPCAFRKRYEACARPPLRTTSGI 55
           Q H  H PPIH     P+L       +      +PP+ ++S I
Sbjct: 88  QLHSHHGPPIHHQIRPPILHDTQPMCESLN--TQPPVTSSSNI 128


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -2

Query: 183 QRHEVHSPPIHRLTDQPLL 127
           Q H  H PPIH     P+L
Sbjct: 88  QLHSHHGPPIHHQIRPPIL 106


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 9/36 (25%), Positives = 19/36 (52%)
 Frame = -1

Query: 532 HFLFVPWLEHAFDDITTYIIFFAKVEQLTDFGSTFG 425
           H+       H F+ +  Y ++ A + Q+++  +TFG
Sbjct: 499 HYYVNVTFPHLFNGLVDYSLWKALIFQISNLQTTFG 534


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 290 HRGAVCYMSGHLHQKTN 240
           H+GAVC++    +Q  N
Sbjct: 133 HQGAVCHLETRPNQSDN 149


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = -1

Query: 529 FLFVPWLEHAFDDITTYIIFFAKV 458
           F+ +P+LEH    +   +I+F ++
Sbjct: 131 FINLPFLEHNLIRLKNCVIYFNRI 154


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = -2

Query: 384 ISWAPLXTITRAKTEXLASTIHPRTNLRF 298
           +SW    +I    ++ + + IH +TN  F
Sbjct: 177 LSWNNPCSINSTSSQPVGTQIHQQTNHTF 205


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 10/36 (27%), Positives = 16/36 (44%)
 Frame = +2

Query: 221 RPDKQPCSSSDANGHSCNRPLRDGERKRKLVRGCIV 328
           R D  P S +  +  SC+   + G   R+    C+V
Sbjct: 155 REDLSPSSLNGYSADSCDSKKKKGPTPRQQEELCLV 190


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,929
Number of Sequences: 336
Number of extensions: 2722
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13681771
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)