Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00331
(663 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M58458-1|AAA63255.1| 263|Homo sapiens ribosomal protein S4X iso... 153 5e-37
CR456735-1|CAG33016.1| 263|Homo sapiens RPS4X protein. 153 5e-37
BC100904-1|AAI00905.1| 263|Homo sapiens RPS4X protein protein. 153 5e-37
BC100903-1|AAI00904.1| 263|Homo sapiens RPS4X protein protein. 153 5e-37
BC071662-1|AAH71662.1| 263|Homo sapiens ribosomal protein S4, X... 153 5e-37
BC007308-1|AAH07308.2| 243|Homo sapiens RPS4X protein protein. 153 5e-37
BC000472-1|AAH00472.1| 263|Homo sapiens ribosomal protein S4, X... 153 5e-37
AF041428-1|AAB96968.1| 263|Homo sapiens ribosomal protein s4 X ... 153 5e-37
M58459-1|AAA63256.1| 263|Homo sapiens ribosomal protein S4Y iso... 152 1e-36
BC100906-1|AAI00907.1| 262|Homo sapiens RPS4Y1 protein protein. 152 1e-36
BC100905-1|AAI00906.1| 263|Homo sapiens ribosomal protein S4, Y... 152 1e-36
BC010286-1|AAH10286.1| 263|Homo sapiens ribosomal protein S4, Y... 152 1e-36
AK222594-1|BAD96314.1| 263|Homo sapiens ribosomal protein S4, Y... 152 1e-36
AF041427-1|AAB96967.1| 263|Homo sapiens ribosomal protein s4 Y ... 152 1e-36
AK222479-1|BAD96199.1| 263|Homo sapiens ribosomal protein S4, X... 151 2e-36
M22146-1|AAA36597.1| 244|Homo sapiens protein ( Human scar prot... 149 1e-35
AF497481-1|AAM18074.1| 263|Homo sapiens ribosomal protein S4 pr... 143 6e-34
Z70767-1|CAA94808.1| 59|Homo sapiens ribosomal protein S4 prot... 71 4e-12
AK126036-1|BAC86406.1| 1012|Homo sapiens protein ( Homo sapiens ... 30 6.4
AF261093-2|AAG13905.1| 142|Homo sapiens Thy-1 co-transcribed pr... 30 6.4
>M58458-1|AAA63255.1| 263|Homo sapiens ribosomal protein S4X
isoform protein.
Length = 263
Score = 153 bits (371), Expect = 5e-37
Identities = 70/84 (83%), Positives = 76/84 (90%)
Frame = +3
Query: 3 GVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPA 182
GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI QR IK+DGKVRTD TYPA
Sbjct: 25 GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84
Query: 183 GFMDVVSIEKTNELFRLIYDVKGR 254
GFMDV+SI+KT E FRLIYD KGR
Sbjct: 85 GFMDVISIDKTGENFRLIYDTKGR 108
Score = 149 bits (360), Expect = 1e-35
Identities = 62/87 (71%), Positives = 76/87 (87%)
Frame = +2
Query: 248 GQITIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIAT 427
G+ +HRITPEEAKYKLCKV+++ G K +P+LVTHD RTIRYPDPLIKVND+IQ+D+ T
Sbjct: 107 GRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLET 166
Query: 428 TKIMDFIKFESGNLCMITGGRNLGRVG 508
KI DFIKF++GNLCM+TGG NLGR+G
Sbjct: 167 GKITDFIKFDTGNLCMVTGGANLGRIG 193
Score = 70.5 bits (165), Expect = 5e-12
Identities = 28/42 (66%), Positives = 37/42 (88%)
Frame = +1
Query: 493 LGACGPIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGK 618
LG G I +RERHPGSFD+VH+KD+ G++FATRL+N+F+IGK
Sbjct: 189 LGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGK 230
>CR456735-1|CAG33016.1| 263|Homo sapiens RPS4X protein.
Length = 263
Score = 153 bits (371), Expect = 5e-37
Identities = 70/84 (83%), Positives = 76/84 (90%)
Frame = +3
Query: 3 GVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPA 182
GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI QR IK+DGKVRTD TYPA
Sbjct: 25 GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84
Query: 183 GFMDVVSIEKTNELFRLIYDVKGR 254
GFMDV+SI+KT E FRLIYD KGR
Sbjct: 85 GFMDVISIDKTGENFRLIYDTKGR 108
Score = 149 bits (360), Expect = 1e-35
Identities = 62/87 (71%), Positives = 76/87 (87%)
Frame = +2
Query: 248 GQITIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIAT 427
G+ +HRITPEEAKYKLCKV+++ G K +P+LVTHD RTIRYPDPLIKVND+IQ+D+ T
Sbjct: 107 GRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLET 166
Query: 428 TKIMDFIKFESGNLCMITGGRNLGRVG 508
KI DFIKF++GNLCM+TGG NLGR+G
Sbjct: 167 GKITDFIKFDTGNLCMVTGGANLGRIG 193
Score = 70.5 bits (165), Expect = 5e-12
Identities = 28/42 (66%), Positives = 37/42 (88%)
Frame = +1
Query: 493 LGACGPIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGK 618
LG G I +RERHPGSFD+VH+KD+ G++FATRL+N+F+IGK
Sbjct: 189 LGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGK 230
>BC100904-1|AAI00905.1| 263|Homo sapiens RPS4X protein protein.
Length = 263
Score = 153 bits (371), Expect = 5e-37
Identities = 70/84 (83%), Positives = 76/84 (90%)
Frame = +3
Query: 3 GVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPA 182
GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI QR IK+DGKVRTD TYPA
Sbjct: 25 GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84
Query: 183 GFMDVVSIEKTNELFRLIYDVKGR 254
GFMDV+SI+KT E FRLIYD KGR
Sbjct: 85 GFMDVISIDKTGENFRLIYDTKGR 108
Score = 149 bits (360), Expect = 1e-35
Identities = 62/87 (71%), Positives = 76/87 (87%)
Frame = +2
Query: 248 GQITIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIAT 427
G+ +HRITPEEAKYKLCKV+++ G K +P+LVTHD RTIRYPDPLIKVND+IQ+D+ T
Sbjct: 107 GRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLET 166
Query: 428 TKIMDFIKFESGNLCMITGGRNLGRVG 508
KI DFIKF++GNLCM+TGG NLGR+G
Sbjct: 167 GKITDFIKFDTGNLCMVTGGANLGRIG 193
Score = 70.5 bits (165), Expect = 5e-12
Identities = 28/42 (66%), Positives = 37/42 (88%)
Frame = +1
Query: 493 LGACGPIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGK 618
LG G I +RERHPGSFD+VH+KD+ G++FATRL+N+F+IGK
Sbjct: 189 LGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGK 230
>BC100903-1|AAI00904.1| 263|Homo sapiens RPS4X protein protein.
Length = 263
Score = 153 bits (371), Expect = 5e-37
Identities = 70/84 (83%), Positives = 76/84 (90%)
Frame = +3
Query: 3 GVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPA 182
GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI QR IK+DGKVRTD TYPA
Sbjct: 25 GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84
Query: 183 GFMDVVSIEKTNELFRLIYDVKGR 254
GFMDV+SI+KT E FRLIYD KGR
Sbjct: 85 GFMDVISIDKTGENFRLIYDTKGR 108
Score = 149 bits (360), Expect = 1e-35
Identities = 62/87 (71%), Positives = 76/87 (87%)
Frame = +2
Query: 248 GQITIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIAT 427
G+ +HRITPEEAKYKLCKV+++ G K +P+LVTHD RTIRYPDPLIKVND+IQ+D+ T
Sbjct: 107 GRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLET 166
Query: 428 TKIMDFIKFESGNLCMITGGRNLGRVG 508
KI DFIKF++GNLCM+TGG NLGR+G
Sbjct: 167 GKITDFIKFDTGNLCMVTGGANLGRIG 193
Score = 70.5 bits (165), Expect = 5e-12
Identities = 28/42 (66%), Positives = 37/42 (88%)
Frame = +1
Query: 493 LGACGPIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGK 618
LG G I +RERHPGSFD+VH+KD+ G++FATRL+N+F+IGK
Sbjct: 189 LGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGK 230
>BC071662-1|AAH71662.1| 263|Homo sapiens ribosomal protein S4,
X-linked protein.
Length = 263
Score = 153 bits (371), Expect = 5e-37
Identities = 70/84 (83%), Positives = 76/84 (90%)
Frame = +3
Query: 3 GVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPA 182
GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI QR IK+DGKVRTD TYPA
Sbjct: 25 GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84
Query: 183 GFMDVVSIEKTNELFRLIYDVKGR 254
GFMDV+SI+KT E FRLIYD KGR
Sbjct: 85 GFMDVISIDKTGENFRLIYDTKGR 108
Score = 149 bits (360), Expect = 1e-35
Identities = 62/87 (71%), Positives = 76/87 (87%)
Frame = +2
Query: 248 GQITIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIAT 427
G+ +HRITPEEAKYKLCKV+++ G K +P+LVTHD RTIRYPDPLIKVND+IQ+D+ T
Sbjct: 107 GRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLET 166
Query: 428 TKIMDFIKFESGNLCMITGGRNLGRVG 508
KI DFIKF++GNLCM+TGG NLGR+G
Sbjct: 167 GKITDFIKFDTGNLCMVTGGANLGRIG 193
Score = 70.5 bits (165), Expect = 5e-12
Identities = 28/42 (66%), Positives = 37/42 (88%)
Frame = +1
Query: 493 LGACGPIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGK 618
LG G I +RERHPGSFD+VH+KD+ G++FATRL+N+F+IGK
Sbjct: 189 LGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGK 230
>BC007308-1|AAH07308.2| 243|Homo sapiens RPS4X protein protein.
Length = 243
Score = 153 bits (371), Expect = 5e-37
Identities = 70/84 (83%), Positives = 76/84 (90%)
Frame = +3
Query: 3 GVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPA 182
GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI QR IK+DGKVRTD TYPA
Sbjct: 5 GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 64
Query: 183 GFMDVVSIEKTNELFRLIYDVKGR 254
GFMDV+SI+KT E FRLIYD KGR
Sbjct: 65 GFMDVISIDKTGENFRLIYDTKGR 88
Score = 149 bits (360), Expect = 1e-35
Identities = 62/87 (71%), Positives = 76/87 (87%)
Frame = +2
Query: 248 GQITIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIAT 427
G+ +HRITPEEAKYKLCKV+++ G K +P+LVTHD RTIRYPDPLIKVND+IQ+D+ T
Sbjct: 87 GRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLET 146
Query: 428 TKIMDFIKFESGNLCMITGGRNLGRVG 508
KI DFIKF++GNLCM+TGG NLGR+G
Sbjct: 147 GKITDFIKFDTGNLCMVTGGANLGRIG 173
Score = 70.5 bits (165), Expect = 5e-12
Identities = 28/42 (66%), Positives = 37/42 (88%)
Frame = +1
Query: 493 LGACGPIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGK 618
LG G I +RERHPGSFD+VH+KD+ G++FATRL+N+F+IGK
Sbjct: 169 LGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGK 210
>BC000472-1|AAH00472.1| 263|Homo sapiens ribosomal protein S4,
X-linked protein.
Length = 263
Score = 153 bits (371), Expect = 5e-37
Identities = 70/84 (83%), Positives = 76/84 (90%)
Frame = +3
Query: 3 GVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPA 182
GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI QR IK+DGKVRTD TYPA
Sbjct: 25 GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84
Query: 183 GFMDVVSIEKTNELFRLIYDVKGR 254
GFMDV+SI+KT E FRLIYD KGR
Sbjct: 85 GFMDVISIDKTGENFRLIYDTKGR 108
Score = 149 bits (360), Expect = 1e-35
Identities = 62/87 (71%), Positives = 76/87 (87%)
Frame = +2
Query: 248 GQITIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIAT 427
G+ +HRITPEEAKYKLCKV+++ G K +P+LVTHD RTIRYPDPLIKVND+IQ+D+ T
Sbjct: 107 GRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLET 166
Query: 428 TKIMDFIKFESGNLCMITGGRNLGRVG 508
KI DFIKF++GNLCM+TGG NLGR+G
Sbjct: 167 GKITDFIKFDTGNLCMVTGGANLGRIG 193
Score = 70.5 bits (165), Expect = 5e-12
Identities = 28/42 (66%), Positives = 37/42 (88%)
Frame = +1
Query: 493 LGACGPIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGK 618
LG G I +RERHPGSFD+VH+KD+ G++FATRL+N+F+IGK
Sbjct: 189 LGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGK 230
>AF041428-1|AAB96968.1| 263|Homo sapiens ribosomal protein s4 X
isoform protein.
Length = 263
Score = 153 bits (371), Expect = 5e-37
Identities = 70/84 (83%), Positives = 76/84 (90%)
Frame = +3
Query: 3 GVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPA 182
GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI QR IK+DGKVRTD TYPA
Sbjct: 25 GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84
Query: 183 GFMDVVSIEKTNELFRLIYDVKGR 254
GFMDV+SI+KT E FRLIYD KGR
Sbjct: 85 GFMDVISIDKTGENFRLIYDTKGR 108
Score = 149 bits (360), Expect = 1e-35
Identities = 62/87 (71%), Positives = 76/87 (87%)
Frame = +2
Query: 248 GQITIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIAT 427
G+ +HRITPEEAKYKLCKV+++ G K +P+LVTHD RTIRYPDPLIKVND+IQ+D+ T
Sbjct: 107 GRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLET 166
Query: 428 TKIMDFIKFESGNLCMITGGRNLGRVG 508
KI DFIKF++GNLCM+TGG NLGR+G
Sbjct: 167 GKITDFIKFDTGNLCMVTGGANLGRIG 193
Score = 70.5 bits (165), Expect = 5e-12
Identities = 28/42 (66%), Positives = 37/42 (88%)
Frame = +1
Query: 493 LGACGPIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGK 618
LG G I +RERHPGSFD+VH+KD+ G++FATRL+N+F+IGK
Sbjct: 189 LGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGK 230
>M58459-1|AAA63256.1| 263|Homo sapiens ribosomal protein S4Y
isoform protein.
Length = 263
Score = 152 bits (368), Expect = 1e-36
Identities = 68/84 (80%), Positives = 75/84 (89%)
Frame = +3
Query: 3 GVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPA 182
GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+EV KI QR IK+DGKVR D TYPA
Sbjct: 25 GVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDGKVRVDVTYPA 84
Query: 183 GFMDVVSIEKTNELFRLIYDVKGR 254
GFMDV+SIEKT E FRL+YD KGR
Sbjct: 85 GFMDVISIEKTGEHFRLVYDTKGR 108
Score = 141 bits (341), Expect = 2e-33
Identities = 58/87 (66%), Positives = 75/87 (86%)
Frame = +2
Query: 248 GQITIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIAT 427
G+ +HRIT EEAKYKLCKV+++ G K +P+LVTHD RTIRYPDP+IKVND++Q+D+ T
Sbjct: 107 GRFAVHRITVEEAKYKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGT 166
Query: 428 TKIMDFIKFESGNLCMITGGRNLGRVG 508
KI++FIKF++GNLCM+ GG NLGRVG
Sbjct: 167 GKIINFIKFDTGNLCMVIGGANLGRVG 193
Score = 68.5 bits (160), Expect = 2e-11
Identities = 27/41 (65%), Positives = 36/41 (87%)
Frame = +1
Query: 493 LGACGPIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIG 615
LG G I +RERHPGSFD+VH+KD+ G++FATRL+N+F+IG
Sbjct: 189 LGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIG 229
>BC100906-1|AAI00907.1| 262|Homo sapiens RPS4Y1 protein protein.
Length = 262
Score = 152 bits (368), Expect = 1e-36
Identities = 68/84 (80%), Positives = 75/84 (89%)
Frame = +3
Query: 3 GVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPA 182
GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+EV KI QR IK+DGKVR D TYPA
Sbjct: 24 GVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDGKVRVDVTYPA 83
Query: 183 GFMDVVSIEKTNELFRLIYDVKGR 254
GFMDV+SIEKT E FRL+YD KGR
Sbjct: 84 GFMDVISIEKTGEHFRLVYDTKGR 107
Score = 141 bits (341), Expect = 2e-33
Identities = 58/87 (66%), Positives = 75/87 (86%)
Frame = +2
Query: 248 GQITIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIAT 427
G+ +HRIT EEAKYKLCKV+++ G K +P+LVTHD RTIRYPDP+IKVND++Q+D+ T
Sbjct: 106 GRFAVHRITVEEAKYKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGT 165
Query: 428 TKIMDFIKFESGNLCMITGGRNLGRVG 508
KI++FIKF++GNLCM+ GG NLGRVG
Sbjct: 166 GKIINFIKFDTGNLCMVIGGANLGRVG 192
Score = 68.5 bits (160), Expect = 2e-11
Identities = 27/41 (65%), Positives = 36/41 (87%)
Frame = +1
Query: 493 LGACGPIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIG 615
LG G I +RERHPGSFD+VH+KD+ G++FATRL+N+F+IG
Sbjct: 188 LGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIG 228
>BC100905-1|AAI00906.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 protein.
Length = 263
Score = 152 bits (368), Expect = 1e-36
Identities = 68/84 (80%), Positives = 75/84 (89%)
Frame = +3
Query: 3 GVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPA 182
GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+EV KI QR IK+DGKVR D TYPA
Sbjct: 25 GVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDGKVRVDVTYPA 84
Query: 183 GFMDVVSIEKTNELFRLIYDVKGR 254
GFMDV+SIEKT E FRL+YD KGR
Sbjct: 85 GFMDVISIEKTGEHFRLVYDTKGR 108
Score = 141 bits (341), Expect = 2e-33
Identities = 58/87 (66%), Positives = 75/87 (86%)
Frame = +2
Query: 248 GQITIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIAT 427
G+ +HRIT EEAKYKLCKV+++ G K +P+LVTHD RTIRYPDP+IKVND++Q+D+ T
Sbjct: 107 GRFAVHRITVEEAKYKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGT 166
Query: 428 TKIMDFIKFESGNLCMITGGRNLGRVG 508
KI++FIKF++GNLCM+ GG NLGRVG
Sbjct: 167 GKIINFIKFDTGNLCMVIGGANLGRVG 193
Score = 68.5 bits (160), Expect = 2e-11
Identities = 27/41 (65%), Positives = 36/41 (87%)
Frame = +1
Query: 493 LGACGPIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIG 615
LG G I +RERHPGSFD+VH+KD+ G++FATRL+N+F+IG
Sbjct: 189 LGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIG 229
>BC010286-1|AAH10286.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 protein.
Length = 263
Score = 152 bits (368), Expect = 1e-36
Identities = 68/84 (80%), Positives = 75/84 (89%)
Frame = +3
Query: 3 GVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPA 182
GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+EV KI QR IK+DGKVR D TYPA
Sbjct: 25 GVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDGKVRVDVTYPA 84
Query: 183 GFMDVVSIEKTNELFRLIYDVKGR 254
GFMDV+SIEKT E FRL+YD KGR
Sbjct: 85 GFMDVISIEKTGEHFRLVYDTKGR 108
Score = 141 bits (341), Expect = 2e-33
Identities = 58/87 (66%), Positives = 75/87 (86%)
Frame = +2
Query: 248 GQITIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIAT 427
G+ +HRIT EEAKYKLCKV+++ G K +P+LVTHD RTIRYPDP+IKVND++Q+D+ T
Sbjct: 107 GRFAVHRITVEEAKYKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGT 166
Query: 428 TKIMDFIKFESGNLCMITGGRNLGRVG 508
KI++FIKF++GNLCM+ GG NLGRVG
Sbjct: 167 GKIINFIKFDTGNLCMVIGGANLGRVG 193
Score = 68.5 bits (160), Expect = 2e-11
Identities = 27/41 (65%), Positives = 36/41 (87%)
Frame = +1
Query: 493 LGACGPIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIG 615
LG G I +RERHPGSFD+VH+KD+ G++FATRL+N+F+IG
Sbjct: 189 LGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIG 229
>AK222594-1|BAD96314.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 Y isoform variant protein.
Length = 263
Score = 152 bits (368), Expect = 1e-36
Identities = 68/84 (80%), Positives = 75/84 (89%)
Frame = +3
Query: 3 GVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPA 182
GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+EV KI QR IK+DGKVR D TYPA
Sbjct: 25 GVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDGKVRVDVTYPA 84
Query: 183 GFMDVVSIEKTNELFRLIYDVKGR 254
GFMDV+SIEKT E FRL+YD KGR
Sbjct: 85 GFMDVISIEKTGEHFRLVYDTKGR 108
Score = 141 bits (341), Expect = 2e-33
Identities = 58/87 (66%), Positives = 75/87 (86%)
Frame = +2
Query: 248 GQITIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIAT 427
G+ +HRIT EEAKYKLCKV+++ G K +P+LVTHD RTIRYPDP+IKVND++Q+D+ T
Sbjct: 107 GRFAVHRITVEEAKYKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGT 166
Query: 428 TKIMDFIKFESGNLCMITGGRNLGRVG 508
KI++FIKF++GNLCM+ GG NLGRVG
Sbjct: 167 GKIINFIKFDTGNLCMVIGGANLGRVG 193
Score = 65.7 bits (153), Expect = 1e-10
Identities = 26/41 (63%), Positives = 35/41 (85%)
Frame = +1
Query: 493 LGACGPIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIG 615
LG G I +RERHPGSF +VH+KD+ G++FATRL+N+F+IG
Sbjct: 189 LGRVGVITNRERHPGSFGVVHVKDANGNSFATRLSNIFVIG 229
>AF041427-1|AAB96967.1| 263|Homo sapiens ribosomal protein s4 Y
isoform protein.
Length = 263
Score = 152 bits (368), Expect = 1e-36
Identities = 68/84 (80%), Positives = 75/84 (89%)
Frame = +3
Query: 3 GVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPA 182
GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+EV KI QR IK+DGKVR D TYPA
Sbjct: 25 GVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDGKVRVDVTYPA 84
Query: 183 GFMDVVSIEKTNELFRLIYDVKGR 254
GFMDV+SIEKT E FRL+YD KGR
Sbjct: 85 GFMDVISIEKTGEHFRLVYDTKGR 108
Score = 141 bits (341), Expect = 2e-33
Identities = 58/87 (66%), Positives = 75/87 (86%)
Frame = +2
Query: 248 GQITIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIAT 427
G+ +HRIT EEAKYKLCKV+++ G K +P+LVTHD RTIRYPDP+IKVND++Q+D+ T
Sbjct: 107 GRFAVHRITVEEAKYKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGT 166
Query: 428 TKIMDFIKFESGNLCMITGGRNLGRVG 508
KI++FIKF++GNLCM+ GG NLGRVG
Sbjct: 167 GKIINFIKFDTGNLCMVIGGANLGRVG 193
Score = 68.5 bits (160), Expect = 2e-11
Identities = 27/41 (65%), Positives = 36/41 (87%)
Frame = +1
Query: 493 LGACGPIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIG 615
LG G I +RERHPGSFD+VH+KD+ G++FATRL+N+F+IG
Sbjct: 189 LGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIG 229
>AK222479-1|BAD96199.1| 263|Homo sapiens ribosomal protein S4,
X-linked X isoform variant protein.
Length = 263
Score = 151 bits (366), Expect = 2e-36
Identities = 69/84 (82%), Positives = 75/84 (89%)
Frame = +3
Query: 3 GVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPA 182
GV+AP PSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI QR IK+DGKVRTD TYPA
Sbjct: 25 GVFAPHPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84
Query: 183 GFMDVVSIEKTNELFRLIYDVKGR 254
GFMDV+SI+KT E FRLIYD KGR
Sbjct: 85 GFMDVISIDKTGENFRLIYDTKGR 108
Score = 149 bits (360), Expect = 1e-35
Identities = 62/87 (71%), Positives = 76/87 (87%)
Frame = +2
Query: 248 GQITIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIAT 427
G+ +HRITPEEAKYKLCKV+++ G K +P+LVTHD RTIRYPDPLIKVND+IQ+D+ T
Sbjct: 107 GRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLET 166
Query: 428 TKIMDFIKFESGNLCMITGGRNLGRVG 508
KI DFIKF++GNLCM+TGG NLGR+G
Sbjct: 167 GKITDFIKFDTGNLCMVTGGANLGRIG 193
Score = 70.5 bits (165), Expect = 5e-12
Identities = 28/42 (66%), Positives = 37/42 (88%)
Frame = +1
Query: 493 LGACGPIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGK 618
LG G I +RERHPGSFD+VH+KD+ G++FATRL+N+F+IGK
Sbjct: 189 LGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGK 230
>M22146-1|AAA36597.1| 244|Homo sapiens protein ( Human scar protein
mRNA, complete cds. ).
Length = 244
Score = 149 bits (360), Expect = 1e-35
Identities = 62/87 (71%), Positives = 76/87 (87%)
Frame = +2
Query: 248 GQITIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIAT 427
G+ +HRITPEEAKYKLCKV+++ G K +P+LVTHD RTIRYPDPLIKVND+IQ+D+ T
Sbjct: 88 GRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLET 147
Query: 428 TKIMDFIKFESGNLCMITGGRNLGRVG 508
KI DFIKF++GNLCM+TGG NLGR+G
Sbjct: 148 GKITDFIKFDTGNLCMVTGGANLGRIG 174
Score = 146 bits (355), Expect = 5e-35
Identities = 69/84 (82%), Positives = 75/84 (89%)
Frame = +3
Query: 3 GVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPA 182
GV+APRPS GPHKLRECLPL+IFLRNRLKYALTG+EV KI QR IK+DGKVRTD TYPA
Sbjct: 7 GVFAPRPS-GPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 65
Query: 183 GFMDVVSIEKTNELFRLIYDVKGR 254
GFMDV+SI+KT E FRLIYD KGR
Sbjct: 66 GFMDVISIDKTGENFRLIYDTKGR 89
Score = 70.5 bits (165), Expect = 5e-12
Identities = 28/42 (66%), Positives = 37/42 (88%)
Frame = +1
Query: 493 LGACGPIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGK 618
LG G I +RERHPGSFD+VH+KD+ G++FATRL+N+F+IGK
Sbjct: 170 LGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGK 211
>AF497481-1|AAM18074.1| 263|Homo sapiens ribosomal protein S4
protein.
Length = 263
Score = 143 bits (346), Expect = 6e-34
Identities = 63/83 (75%), Positives = 73/83 (87%)
Frame = +3
Query: 3 GVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPA 182
GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+EV KI Q +K+DGKVR D TYPA
Sbjct: 25 GVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQHFLKIDGKVRVDITYPA 84
Query: 183 GFMDVVSIEKTNELFRLIYDVKG 251
GF+DV+SIEKT E FRL+Y+ KG
Sbjct: 85 GFIDVISIEKTGEHFRLVYNTKG 107
Score = 136 bits (329), Expect = 7e-32
Identities = 57/87 (65%), Positives = 71/87 (81%)
Frame = +2
Query: 248 GQITIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIAT 427
G +HRIT EEAKYKLCKV+++ G K +P+LVTHD RTIRYPDPLIKVND++Q+D+ T
Sbjct: 107 GCFAVHRITVEEAKYKLCKVRKITVGTKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLGT 166
Query: 428 TKIMDFIKFESGNLCMITGGRNLGRVG 508
KI FIKF++GN+CM+ G NLGRVG
Sbjct: 167 GKITSFIKFDTGNVCMVIAGANLGRVG 193
Score = 64.5 bits (150), Expect = 3e-10
Identities = 25/41 (60%), Positives = 35/41 (85%)
Frame = +1
Query: 493 LGACGPIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIG 615
LG G I +RERHPGS D+VH+KD+ G++FATR++N+F+IG
Sbjct: 189 LGRVGVITNRERHPGSCDVVHVKDANGNSFATRISNIFVIG 229
>Z70767-1|CAA94808.1| 59|Homo sapiens ribosomal protein S4
protein.
Length = 59
Score = 70.9 bits (166), Expect = 4e-12
Identities = 30/32 (93%), Positives = 32/32 (100%)
Frame = +3
Query: 3 GVYAPRPSTGPHKLRECLPLVIFLRNRLKYAL 98
GV+APRPSTGPHKLRECLPL+IFLRNRLKYAL
Sbjct: 25 GVFAPRPSTGPHKLRECLPLIIFLRNRLKYAL 56
>AK126036-1|BAC86406.1| 1012|Homo sapiens protein ( Homo sapiens
cDNA FLJ44048 fis, clone TESTI4030669. ).
Length = 1012
Score = 30.3 bits (65), Expect = 6.4
Identities = 21/63 (33%), Positives = 33/63 (52%)
Frame = +3
Query: 156 VRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRSQSTVSPLRRLSTSCVKSSVWRPDLRM 335
V+ DP + + V+SI KT L +L + R+ +++ LRR S S S+ PDL
Sbjct: 635 VKIDPKIISEHLAVISI-KTQPLEKLKQECLKRTGHSIAELRRASISGRNYSLGSPDLEK 693
Query: 336 FRT 344
+T
Sbjct: 694 RKT 696
>AF261093-2|AAG13905.1| 142|Homo sapiens Thy-1 co-transcribed
protein protein.
Length = 142
Score = 30.3 bits (65), Expect = 6.4
Identities = 20/56 (35%), Positives = 25/56 (44%)
Frame = +2
Query: 482 GGRNLGRVGPSCPARDIPAPSTLCTSRTPRDTPSPRG*TTCS*SARHEGVHLVAAR 649
G + + G S P +PAP+ C S P D+P PR SA E H V R
Sbjct: 66 GLAQVSKGGTSSPRPSVPAPAGWCLS--PSDSPLPRRPAFSGTSAGPEASHGVRPR 119
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,672,103
Number of Sequences: 237096
Number of extensions: 2556084
Number of successful extensions: 7140
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 6723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7137
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7478817430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -