Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00330
         (440 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s...    23   3.6  
AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          23   6.4  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           22   8.4  

>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
           symporter protein.
          Length = 1127

 Score = 23.4 bits (48), Expect = 3.6
 Identities = 14/39 (35%), Positives = 16/39 (41%)
 Frame = +1

Query: 190 LSGNSGRKHSRCCTSILRKFSGGSIVSQLTAAAMVAPTP 306
           LS N        C S+ R  S  S  S L+    VAP P
Sbjct: 853 LSHNKVSSLHGSCDSLSRNVSQASSTSDLSKTISVAPDP 891


>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 22.6 bits (46), Expect = 6.4
 Identities = 5/12 (41%), Positives = 8/12 (66%)
 Frame = +1

Query: 127 CCNIWHWGSVDS 162
           CC +W W  ++S
Sbjct: 88  CCRLWRWPDLNS 99


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 22.2 bits (45), Expect = 8.4
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -3

Query: 342  RFRERVMFSITSWRGGYHG 286
            R+  R++  I++W+G  HG
Sbjct: 959  RWTHRIIRDISAWQGRRHG 977


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 428,290
Number of Sequences: 2352
Number of extensions: 7878
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 36993357
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)