Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00329
         (744 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U55375-5|AAC69045.1|  126|Caenorhabditis elegans Profilin protei...    35   0.053
AY530910-1|AAT01435.1|  126|Caenorhabditis elegans profilin-3 pr...    35   0.053
U40941-2|AAA81708.3|  131|Caenorhabditis elegans Profilin protei...    33   0.28 
AY530909-1|AAT01434.1|  131|Caenorhabditis elegans profilin-2 pr...    33   0.28 
U13019-10|AAC24442.1|  757|Caenorhabditis elegans Hypothetical p...    29   4.6  
U97404-2|AAB93309.1|  795|Caenorhabditis elegans Acid-sensing/am...    28   6.1  

>U55375-5|AAC69045.1|  126|Caenorhabditis elegans Profilin protein 3
           protein.
          Length = 126

 Score = 35.1 bits (77), Expect = 0.053
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = +2

Query: 53  GKVGVHCMKTQQAVVISLYEEPIQPQQAASVVEKLGEYLITCGY 184
           G  G    KT QAV+IS+YE+ +QP+  +     L +Y  +  Y
Sbjct: 83  GGSGFFIYKTIQAVIISIYEKGLQPEMCSKTTGALADYFRSIKY 126


>AY530910-1|AAT01435.1|  126|Caenorhabditis elegans profilin-3
           protein.
          Length = 126

 Score = 35.1 bits (77), Expect = 0.053
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = +2

Query: 53  GKVGVHCMKTQQAVVISLYEEPIQPQQAASVVEKLGEYLITCGY 184
           G  G    KT QAV+IS+YE+ +QP+  +     L +Y  +  Y
Sbjct: 83  GGSGFFIYKTIQAVIISIYEKGLQPEMCSKTTGALADYFRSIKY 126


>U40941-2|AAA81708.3|  131|Caenorhabditis elegans Profilin protein 2
           protein.
          Length = 131

 Score = 32.7 bits (71), Expect = 0.28
 Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = +2

Query: 56  KVGVHCMKTQQAVVISLYE-EPIQPQQAASVVEKLGEYLITCGY 184
           + G    KT QA+VI++YE +  Q     + VE + +YL + GY
Sbjct: 88  QTGFFAAKTNQAIVIAMYEGDNAQSASVRAGVEYIAQYLASSGY 131


>AY530909-1|AAT01434.1|  131|Caenorhabditis elegans profilin-2
           protein.
          Length = 131

 Score = 32.7 bits (71), Expect = 0.28
 Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = +2

Query: 56  KVGVHCMKTQQAVVISLYE-EPIQPQQAASVVEKLGEYLITCGY 184
           + G    KT QA+VI++YE +  Q     + VE + +YL + GY
Sbjct: 88  QTGFFAAKTNQAIVIAMYEGDNAQSASVRAGVEYIAQYLASSGY 131


>U13019-10|AAC24442.1|  757|Caenorhabditis elegans Hypothetical
           protein T12A2.2 protein.
          Length = 757

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 21/63 (33%), Positives = 30/63 (47%)
 Frame = -3

Query: 685 SNFITWLLQILFKHQYKKQS*SYTVFVLCPTEQQLSSPRSYLRTMMLDKKPKNLYTSCFF 506
           S  I W+L  L  H + ++     VF L PT   L++  +YL T  L      L+ +CF 
Sbjct: 98  SGLIHWILDSLNFHVHIRE---VCVF-LAPTFSGLTAIATYLLTKELWSPGAGLFAACFI 153

Query: 505 EIS 497
            IS
Sbjct: 154 AIS 156


>U97404-2|AAB93309.1|  795|Caenorhabditis elegans
           Acid-sensing/amiloride-sensitiveion channel family
           protein 1 protein.
          Length = 795

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 9/24 (37%), Positives = 17/24 (70%)
 Frame = -2

Query: 299 TNERSSYHFIEYTKCVTYFPVEKI 228
           TN+R + HF +++ CVT+  + K+
Sbjct: 186 TNQRQAKHFTDWSTCVTFEDMSKV 209


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,858,288
Number of Sequences: 27780
Number of extensions: 318074
Number of successful extensions: 656
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 656
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)