Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00328
(668 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q1HR63 Cluster: 60S ribosomal protein L13a; n=2; Aedes ... 145 7e-34
UniRef50_Q9VNE9 Cluster: 60S ribosomal protein L13A; n=127; Euka... 138 8e-32
UniRef50_P93099 Cluster: 60S ribosomal protein L13a; n=4; Eukary... 126 4e-28
UniRef50_Q6RH10 Cluster: 60S ribosomal protein L13a; n=5; Magnol... 118 1e-25
UniRef50_Q7R0D6 Cluster: GLP_608_8346_8939; n=1; Giardia lamblia... 98 1e-19
UniRef50_A4S5V9 Cluster: Ribosomal protein L13a, component of cy... 91 3e-17
UniRef50_Q245E7 Cluster: Ribosomal protein L13 containing protei... 91 3e-17
UniRef50_A2DZ26 Cluster: Ribosomal protein L13, putative; n=7; T... 86 8e-16
UniRef50_Q4Q3B9 Cluster: 60S ribosomal protein L13a, putative; n... 79 7e-14
UniRef50_Q98RZ9 Cluster: 60s ribosomal protein L13A; n=1; Guilla... 77 5e-13
UniRef50_Q75J15 Cluster: Putative ribosomal protein L13a; n=1; O... 71 2e-11
UniRef50_UPI0000EB39CE Cluster: UPI0000EB39CE related cluster; n... 71 3e-11
UniRef50_Q4GXI8 Cluster: Ribomsomal protein L13Ae; n=2; Neoptera... 69 1e-10
UniRef50_Q8SS16 Cluster: 60S RIBOSOMAL PROTEIN L13A; n=1; Enceph... 64 4e-09
UniRef50_O18718 Cluster: Ribosomal protein L13A; n=4; Entamoeba|... 53 5e-06
UniRef50_O59300 Cluster: 50S ribosomal protein L13P; n=45; root|... 52 2e-05
UniRef50_A1RWV8 Cluster: Ribosomal protein L13; n=1; Thermofilum... 51 3e-05
UniRef50_Q9YB50 Cluster: 50S ribosomal protein L13P; n=1; Aeropy... 50 7e-05
UniRef50_A0RXP5 Cluster: Ribosomal protein L13; n=1; Cenarchaeum... 48 2e-04
UniRef50_Q53K43 Cluster: Retrotransposon protein, putative, uncl... 48 3e-04
UniRef50_O29137 Cluster: 50S ribosomal protein L13P; n=1; Archae... 47 4e-04
UniRef50_Q8PW45 Cluster: 50S ribosomal protein L13P; n=11; Eurya... 47 5e-04
UniRef50_A7DRR6 Cluster: Ribosomal protein L13; n=1; Candidatus ... 46 6e-04
UniRef50_Q8TVB6 Cluster: 50S ribosomal protein L13P; n=1; Methan... 44 0.003
UniRef50_Q9AVH9 Cluster: Putative senescence-associated protein;... 44 0.003
UniRef50_Q3LWM1 Cluster: Ribosomal protein L13A; n=1; Bigelowiel... 39 0.13
UniRef50_Q9M3S6 Cluster: 60S L13 ribosomal protein; n=1; Arabido... 38 0.22
UniRef50_P95991 Cluster: 50S ribosomal protein L13P; n=3; Sulfol... 36 0.67
UniRef50_Q8ZYQ1 Cluster: 50S ribosomal protein L13P; n=5; Thermo... 36 0.67
UniRef50_P39473 Cluster: 50S ribosomal protein L13P; n=4; Thermo... 34 2.7
UniRef50_Q6L294 Cluster: 50S ribosomal protein L13P; n=4; Thermo... 34 3.6
UniRef50_A6E637 Cluster: Integrins alpha chain; n=1; Roseovarius... 33 6.2
UniRef50_A3Y6T2 Cluster: Sensory box/GGDEF/GAF/EAL domain protei... 33 6.2
UniRef50_A5BYS2 Cluster: Putative uncharacterized protein; n=3; ... 33 6.2
UniRef50_Q92Z94 Cluster: Putative uncharacterized protein; n=1; ... 33 8.2
UniRef50_Q60TB9 Cluster: Putative uncharacterized protein CBG205... 33 8.2
>UniRef50_Q1HR63 Cluster: 60S ribosomal protein L13a; n=2; Aedes
aegypti|Rep: 60S ribosomal protein L13a - Aedes aegypti
(Yellowfever mosquito)
Length = 236
Score = 145 bits (352), Expect = 7e-34
Identities = 75/173 (43%), Positives = 97/173 (56%)
Frame = +2
Query: 5 SNKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQTQHLWQLL*EQTQAYVIPA*EV 184
S K I+IDGRGHLLGRLA+VIAK +L G KVVVVRCE Q + +
Sbjct: 5 SEKPILIDGRGHLLGRLASVIAKQILNGRKVVVVRCEDLQLSGHFFRNKIKFLAYLRKRC 64
Query: 185 QRESCSWTFPF*SSI*DSMEDCKSMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXX 364
F F + + + M+PHKT+RG NAL+RL+ Y+G P PFD
Sbjct: 65 NVNPARGPFHFRAPSRMLWKAVRGMVPHKTKRGHNALKRLKVYEGIPSPFDRQKRLCVPT 124
Query: 365 XXXXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDKRKGKAVKRVAYKRNLR 523
CL+P R +C VGR++HE+GWKYRDVV LE KRK K+ + + L+
Sbjct: 125 AMRQLCLRPDRKFCDVGRVAHEVGWKYRDVVNNLEAKRKIKSRLSYLHSKKLK 177
Score = 88.2 bits (209), Expect = 2e-16
Identities = 36/56 (64%), Positives = 46/56 (82%)
Frame = +3
Query: 87 GTKLLWFAANKLNISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVR 254
G K++ L +SG+FFRNK+K +++LRKRCNVNPARGPFHFRAPS++LWK VR
Sbjct: 32 GRKVVVVRCEDLQLSGHFFRNKIKFLAYLRKRCNVNPARGPFHFRAPSRMLWKAVR 87
>UniRef50_Q9VNE9 Cluster: 60S ribosomal protein L13A; n=127;
Eukaryota|Rep: 60S ribosomal protein L13A - Drosophila
melanogaster (Fruit fly)
Length = 205
Score = 138 bits (335), Expect = 8e-32
Identities = 75/175 (42%), Positives = 100/175 (57%), Gaps = 2/175 (1%)
Frame = +2
Query: 5 SNKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQTQHLWQLL*EQTQ--AYVIPA* 178
+N+ +VIDGRGHLLGRLA+V+AK LL+G KV VVRCE+ + + AY+
Sbjct: 5 TNRTVVIDGRGHLLGRLASVVAKYLLQGGKVAVVRCEELNLSGHFYRNKIKFLAYLRKRC 64
Query: 179 EVQRESCSWTFPF*SSI*DSMEDCKSMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXX 358
V + F S I + + MIPHKT+RG+ AL RLR +DG P P+D
Sbjct: 65 NVNPARGPFHFRAPSRI--FYKAVRGMIPHKTKRGQAALARLRVFDGIPSPYDKRRRVVV 122
Query: 359 XXXXXXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDKRKGKAVKRVAYKRNLR 523
L+ R YC VGRLSHE+GW Y+DV++ LE KRK K + + R L+
Sbjct: 123 PIAMRVLTLRSDRKYCQVGRLSHEVGWHYQDVIKSLERKRKAKLRVTLKHNRELK 177
Score = 85.4 bits (202), Expect = 1e-15
Identities = 35/57 (61%), Positives = 47/57 (82%)
Frame = +3
Query: 84 KGTKLLWFAANKLNISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVR 254
+G K+ +LN+SG+F+RNK+K +++LRKRCNVNPARGPFHFRAPS+I +K VR
Sbjct: 31 QGGKVAVVRCEELNLSGHFYRNKIKFLAYLRKRCNVNPARGPFHFRAPSRIFYKAVR 87
Score = 37.1 bits (82), Expect = 0.38
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = +1
Query: 511 KKLKRITKDAGEKVSKATTPFTTIIQSYGY 600
++LK++T A E ++KA PF II+SYGY
Sbjct: 174 RELKKLTVKARENIAKAAEPFNKIIKSYGY 203
>UniRef50_P93099 Cluster: 60S ribosomal protein L13a; n=4;
Eukaryota|Rep: 60S ribosomal protein L13a - Cyanophora
paradoxa
Length = 200
Score = 126 bits (305), Expect = 4e-28
Identities = 67/170 (39%), Positives = 92/170 (54%)
Frame = +2
Query: 11 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQTQHLWQLL*EQTQAYVIPA*EVQR 190
K +V+D RGHLLGRLAA +AK LL G +VV VR E+ L + + + +
Sbjct: 4 KVVVVDCRGHLLGRLAATLAKELLNGQRVVAVRTEEINISGSLFRNKLKFHAFLKKRMNT 63
Query: 191 ESCSWTFPF*SSI*DSMEDCKSMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 370
F F S + MIPHKT RG AL RL+ ++G PPP+D
Sbjct: 64 NPRRGPFHFRSPARILWRTIRGMIPHKTPRGAAALERLKAFEGVPPPYDKMKRMVIPQAL 123
Query: 371 XXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDKRKGKAVKRVAYKRNL 520
LKPGR +C +GRL+ E+GW++ D+V +LE+KRK K+ A K+ L
Sbjct: 124 RVLRLKPGRKFCVLGRLATEVGWRHSDLVTRLEEKRKTKSAAFYARKKTL 173
>UniRef50_Q6RH10 Cluster: 60S ribosomal protein L13a; n=5;
Magnoliophyta|Rep: 60S ribosomal protein L13a - Capsicum
annuum (Bell pepper)
Length = 220
Score = 118 bits (285), Expect = 1e-25
Identities = 67/187 (35%), Positives = 101/187 (54%), Gaps = 1/187 (0%)
Frame = +2
Query: 5 SNKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQTQHLWQLL*EQTQAYVIPA*EV 184
S + IV+D R H+LGRL++++AK LL G +VVVVRCE+ L+ ++ + +
Sbjct: 8 SARRIVVDARHHMLGRLSSILAKELLNGQRVVVVRCEEICLSGGLVRQKMKYLRFLRKRM 67
Query: 185 QRESCSWTFPF*SSI*DSMEDCKSMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXX 364
+ F + + MIPHKT+RG AL RL+ Y+G PPP+D
Sbjct: 68 NTKPSHGPIHFRAPSKILWRTIRGMIPHKTKRGAAALARLKVYEGVPPPYDKIKRMVIPD 127
Query: 365 XXXXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDKRKGKAVKRVAYKRNLR-GSPRML 541
L+ G YC +G+LS E+GW + D +++LEDKRK +A +V Y+R + R+
Sbjct: 128 ALKVLRLQAGHKYCLLGKLSSEVGWNHYDTIKELEDKRKERA--QVTYERRKQLAKLRVK 185
Query: 542 VRRCRRR 562
R RR
Sbjct: 186 AERLPRR 192
Score = 66.9 bits (156), Expect = 4e-10
Identities = 27/56 (48%), Positives = 38/56 (67%)
Frame = +3
Query: 87 GTKLLWFAANKLNISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVR 254
G +++ ++ +SG R K+K + FLRKR N P+ GP HFRAPSKILW+T+R
Sbjct: 35 GQRVVVVRCEEICLSGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPSKILWRTIR 90
>UniRef50_Q7R0D6 Cluster: GLP_608_8346_8939; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_608_8346_8939 - Giardia lamblia ATCC
50803
Length = 197
Score = 98.3 bits (234), Expect = 1e-19
Identities = 56/156 (35%), Positives = 82/156 (52%), Gaps = 2/156 (1%)
Frame = +2
Query: 17 IVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQTQHLWQLL*EQTQAYVIPA*EVQRE- 193
IVID +GH+LGRL+A++AK LL G++V +VRCE+ + +A+ + +
Sbjct: 4 IVIDCKGHILGRLSAIVAKELLHGHEVALVRCEKA--IISGAFRDVKAHYLKKMHKRTNF 61
Query: 194 -SCSWTFPF*SSI*DSMEDCKSMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 370
F F + + MIP+KT RG +A+ RLR YDG PP
Sbjct: 62 NHLRGPFHFRAPAEIVRRTIRGMIPYKTVRGSDAMSRLRVYDGIPPCCARYKRVVCPSAM 121
Query: 371 XXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDKR 478
CL+P R C VGR++HEIGW++ V + E +R
Sbjct: 122 AYLCLRPERRRCEVGRVAHEIGWQHAADVERYEKRR 157
Score = 46.4 bits (105), Expect = 6e-04
Identities = 23/56 (41%), Positives = 32/56 (57%)
Frame = +3
Query: 87 GTKLLWFAANKLNISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVR 254
G ++ K ISG F K + + KR N N RGPFHFRAP++I+ +T+R
Sbjct: 27 GHEVALVRCEKAIISGAFRDVKAHYLKKMHKRTNFNHLRGPFHFRAPAEIVRRTIR 82
>UniRef50_A4S5V9 Cluster: Ribosomal protein L13a, component of
cytosolic 80S ribosome and 60S large subunit; n=2;
Ostreococcus|Rep: Ribosomal protein L13a, component of
cytosolic 80S ribosome and 60S large subunit -
Ostreococcus lucimarinus CCE9901
Length = 199
Score = 90.6 bits (215), Expect = 3e-17
Identities = 53/169 (31%), Positives = 82/169 (48%)
Frame = +2
Query: 8 NKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQTQHLWQLL*EQTQAYVIPA*EVQ 187
+K IVID +GHL GRLA++++K LL+G VVVVR E ++ + +
Sbjct: 2 DKVIVIDAKGHLFGRLASIVSKQLLQGQHVVVVRTEGICMSGGMVRRRMAHDRYKNKRMN 61
Query: 188 RESCSWTFPF*SSI*DSMEDCKSMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXX 367
+ + S + + M+PHKT RG A R + Y+G P P+D
Sbjct: 62 TNPKKGPYHYTSPSRLFWKTVRGMLPHKTVRGAAAFERFKAYEGIPAPYDKVKRAVVPEA 121
Query: 368 XXXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDKRKGKAVKRVAYKR 514
L G +C +G +IGWK+ +V++LE KR+ A + A K+
Sbjct: 122 LKVLRLGEGHRFCVLGDFCEQIGWKHGAIVKELEAKRQTAASEYWAQKK 170
Score = 49.6 bits (113), Expect = 7e-05
Identities = 18/43 (41%), Positives = 28/43 (65%)
Frame = +3
Query: 126 ISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVR 254
+SG R ++ + KR N NP +GP+H+ +PS++ WKTVR
Sbjct: 41 MSGGMVRRRMAHDRYKNKRMNTNPKKGPYHYTSPSRLFWKTVR 83
>UniRef50_Q245E7 Cluster: Ribosomal protein L13 containing protein;
n=16; Alveolata|Rep: Ribosomal protein L13 containing
protein - Tetrahymena thermophila SB210
Length = 270
Score = 90.6 bits (215), Expect = 3e-17
Identities = 52/161 (32%), Positives = 79/161 (49%)
Frame = +2
Query: 8 NKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQTQHLWQLL*EQTQAYVIPA*EVQ 187
+K +VID +GHLLGRLA+ +AK LL G ++VVVR E L + + +
Sbjct: 75 DKLVVIDAKGHLLGRLASYVAKELLSGQRIVVVRTEAINISGSLFRNRVKFSEFLNKWMN 134
Query: 188 RESCSWTFPF*SSI*DSMEDCKSMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXX 367
F + + M+PHKT +G AL RL+ ++G P P+D
Sbjct: 135 HNPRRGVQHFRAPSRIFWRAVRGMLPHKTPKGAAALERLKIFEGIPTPYDRVKKQVVVDA 194
Query: 368 XXXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDKRKGKA 490
L+ R C +G LS +GW + ++ KLE+KR+ +A
Sbjct: 195 LKVQRLRNSRPVCKLGDLSASVGWGKQTLIEKLEEKRRARA 235
Score = 62.5 bits (145), Expect = 9e-09
Identities = 27/56 (48%), Positives = 36/56 (64%)
Frame = +3
Query: 87 GTKLLWFAANKLNISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVR 254
G +++ +NISG+ FRN++K FL K N NP RG HFRAPS+I W+ VR
Sbjct: 101 GQRIVVVRTEAINISGSLFRNRVKFSEFLNKWMNHNPRRGVQHFRAPSRIFWRAVR 156
>UniRef50_A2DZ26 Cluster: Ribosomal protein L13, putative; n=7;
Trichomonas vaginalis G3|Rep: Ribosomal protein L13,
putative - Trichomonas vaginalis G3
Length = 200
Score = 85.8 bits (203), Expect = 8e-16
Identities = 58/168 (34%), Positives = 83/168 (49%), Gaps = 2/168 (1%)
Frame = +2
Query: 17 IVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQTQHLWQLL*EQTQAYVIPA*EVQRES 196
IVID +GH+ GRLAA +AK LL+G KVVVVRCE+ + Q + T S
Sbjct: 5 IVIDAKGHIQGRLAAAVAKQLLKGRKVVVVRCEEIELNGQH--KFTVHTYERFLNKTTNS 62
Query: 197 CSWTFPF*SSI*DSM--EDCKSMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 370
PF + + MIP+KT RG +A L+ Y+G P + +
Sbjct: 63 NPRDGPFHQRAPHEIFARAVRGMIPYKTHRGADAFANLQCYEGIPAKYVSYKRLVIPHAL 122
Query: 371 XXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDKRKGKAVKRVAYKR 514
+ R +GRLS +GWKY +VV +LE++RK ++ K K+
Sbjct: 123 RCVSIHTDRPTTKLGRLSTTMGWKYGNVVAQLEEQRKAESAKYFEAKK 170
Score = 38.7 bits (86), Expect = 0.13
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = +3
Query: 84 KGTKLLWFAANKLNISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVR 254
KG K++ ++ ++G FL K N NP GPFH RAP +I + VR
Sbjct: 27 KGRKVVVVRCEEIELNGQHKFTVHTYERFLNKTTNSNPRDGPFHQRAPHEIFARAVR 83
>UniRef50_Q4Q3B9 Cluster: 60S ribosomal protein L13a, putative;
n=10; Trypanosomatidae|Rep: 60S ribosomal protein L13a,
putative - Leishmania major
Length = 222
Score = 79.4 bits (187), Expect = 7e-14
Identities = 55/170 (32%), Positives = 74/170 (43%), Gaps = 1/170 (0%)
Frame = +2
Query: 17 IVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQTQHLWQLL*EQTQAYVIPA*EVQRES 196
IVID + H+LGR AAV+AK LL G K+ VVRCEQ + + +
Sbjct: 25 IVIDLKDHVLGRAAAVVAKQLLLGKKITVVRCEQLNIAGTEIRNKIKYLQYLRKRKLTNP 84
Query: 197 CSWTFPF*SSI*DSMEDCKSMIPHKTERGKNALRRLRTYDGCPPPF-DNXXXXXXXXXXX 373
F + + +SM+P T+RG AL L Y+G PP
Sbjct: 85 TKGPFHHRAPSDVFVRTVRSMLPRYTKRGMKALNSLVAYEGIPPNVVRTGGRVVIPRAQR 144
Query: 374 XFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDKRKGKAVKRVAYKRNLR 523
C + R Y +G + +GWKY DVV LE R KA + + LR
Sbjct: 145 HVCYRSERPYTVLGNMCKHVGWKYSDVVANLEKARVEKASRHHEKQAKLR 194
Score = 60.9 bits (141), Expect = 3e-08
Identities = 27/56 (48%), Positives = 36/56 (64%)
Frame = +3
Query: 87 GTKLLWFAANKLNISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVR 254
G K+ +LNI+G RNK+K + +LRKR NP +GPFH RAPS + +TVR
Sbjct: 48 GKKITVVRCEQLNIAGTEIRNKIKYLQYLRKRKLTNPTKGPFHHRAPSDVFVRTVR 103
>UniRef50_Q98RZ9 Cluster: 60s ribosomal protein L13A; n=1;
Guillardia theta|Rep: 60s ribosomal protein L13A -
Guillardia theta (Cryptomonas phi)
Length = 194
Score = 76.6 bits (180), Expect = 5e-13
Identities = 45/155 (29%), Positives = 74/155 (47%)
Frame = +2
Query: 11 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQTQHLWQLL*EQTQAYVIPA*EVQR 190
K V+D + HLLGR+A++ AK +L+G+K++++R E T +L + I +
Sbjct: 2 KIHVLDAKNHLLGRMASICAKKILQGDKIIIIRSELTSITGKLGRNVNKYKSIFKKKTNT 61
Query: 191 ESCSWTFPF*SSI*DSMEDCKSMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 370
F F S + K MIPHKT RG AL+ L+ ++G P F
Sbjct: 62 NPRRGPFHFKSPSKILYQTIKRMIPHKTMRGSKALKNLKIFEGLPRIFSKIKKEKFFEAF 121
Query: 371 XXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDK 475
+K R ++G++ +GWK R + + D+
Sbjct: 122 RYKVIKNYRKTVNLGKVCEVLGWKNRKFIEQKSDQ 156
Score = 58.4 bits (135), Expect = 1e-07
Identities = 24/57 (42%), Positives = 38/57 (66%)
Frame = +3
Query: 84 KGTKLLWFAANKLNISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVR 254
+G K++ + +I+G RN K S +K+ N NP RGPFHF++PSKIL++T++
Sbjct: 26 QGDKIIIIRSELTSITGKLGRNVNKYKSIFKKKTNTNPRRGPFHFKSPSKILYQTIK 82
>UniRef50_Q75J15 Cluster: Putative ribosomal protein L13a; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
ribosomal protein L13a - Oryza sativa subsp. japonica
(Rice)
Length = 172
Score = 71.3 bits (167), Expect = 2e-11
Identities = 30/70 (42%), Positives = 41/70 (58%)
Frame = +2
Query: 251 KSMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHE 430
+ MIPHKT+RG+ AL RL+ Y+ PP+D L+PG YC +G+LS E
Sbjct: 64 RGMIPHKTKRGEAALARLKAYEVVTPPYDRTKRMVIPDALKVLRLQPGHKYCLLGQLSKE 123
Query: 431 IGWKYRDVVR 460
+GW Y D +R
Sbjct: 124 VGWNYYDTIR 133
Score = 44.0 bits (99), Expect = 0.003
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = +3
Query: 180 RCNVNPARGPFHFRAPSKILWKTVR 254
R N P+ GP HFR+P+KILW+TVR
Sbjct: 40 RMNTKPSHGPIHFRSPAKILWRTVR 64
Score = 38.3 bits (85), Expect = 0.17
Identities = 16/28 (57%), Positives = 22/28 (78%)
Frame = +2
Query: 17 IVIDGRGHLLGRLAAVIAKVLLEGNKVV 100
+V+D R H+L RLA++IAK LL G +VV
Sbjct: 12 VVVDARHHMLSRLASIIAKELLNGKRVV 39
>UniRef50_UPI0000EB39CE Cluster: UPI0000EB39CE related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB39CE UniRef100
entry - Canis familiaris
Length = 172
Score = 70.5 bits (165), Expect = 3e-11
Identities = 30/56 (53%), Positives = 41/56 (73%)
Frame = +3
Query: 87 GTKLLWFAANKLNISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVR 254
G K++ +NISGNF+RNKLK ++FL K+ N NP+RGP+ F+APS+I W T R
Sbjct: 29 GCKVVVVHYEGINISGNFYRNKLKYLAFLCKQMNTNPSRGPYRFQAPSRIFWWTAR 84
Score = 48.8 bits (111), Expect = 1e-04
Identities = 19/36 (52%), Positives = 27/36 (75%)
Frame = +2
Query: 383 LKPGRNYCHVGRLSHEIGWKYRDVVRKLEDKRKGKA 490
LKP R + ++GRL+H++GWKY+ V LE+ RK KA
Sbjct: 98 LKPTRKFAYLGRLAHKVGWKYQAVTATLEENRKEKA 133
Score = 39.5 bits (88), Expect = 0.072
Identities = 21/35 (60%), Positives = 26/35 (74%)
Frame = +2
Query: 11 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCE 115
+ +V+ GRGHLLG LAA +AK +L G KVVVV E
Sbjct: 5 QVLVLSGRGHLLGCLAATVAKQVL-GCKVVVVHYE 38
>UniRef50_Q4GXI8 Cluster: Ribomsomal protein L13Ae; n=2;
Neoptera|Rep: Ribomsomal protein L13Ae - Cicindela
campestris (Green tiger beetle)
Length = 78
Score = 68.5 bits (160), Expect = 1e-10
Identities = 27/48 (56%), Positives = 34/48 (70%)
Frame = +2
Query: 380 CLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDKRKGKAVKRVAYKRNLR 523
CLKPGR YCHVGRLSHE+GWKY+ V+ LE KR+ K + R ++
Sbjct: 4 CLKPGRKYCHVGRLSHEVGWKYQKVIESLEHKRQVKVAIKARKHRKMK 51
Score = 44.4 bits (100), Expect = 0.003
Identities = 16/31 (51%), Positives = 24/31 (77%)
Frame = +1
Query: 511 KKLKRITKDAGEKVSKATTPFTTIIQSYGYN 603
+K+KR+TK A +K+ K P+T +I+SYGYN
Sbjct: 48 RKMKRLTKKASKKIEKQVAPYTAVIKSYGYN 78
>UniRef50_Q8SS16 Cluster: 60S RIBOSOMAL PROTEIN L13A; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L13A
- Encephalitozoon cuniculi
Length = 198
Score = 63.7 bits (148), Expect = 4e-09
Identities = 48/170 (28%), Positives = 77/170 (45%), Gaps = 2/170 (1%)
Frame = +2
Query: 17 IVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQTQHLWQL--L*EQTQAYVIPA*EVQR 190
++ID G + G+LAA +AK+LLEG +V VV E+ + L ++ + Y+ V
Sbjct: 7 VIIDATGQVAGKLAAKVAKLLLEGVRVTVVCAEEAVFVGSLERAMDKFKQYLNKRCLVNP 66
Query: 191 ESCSWTFPF*SSI*DSMEDCKSMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 370
F F + + MI +K RGK A+ RL TY+G P +
Sbjct: 67 RR--GPFHFREPRMHLAKIIRRMISYKKPRGKAAMSRLATYEGIPRELEGQPRYKVTCAF 124
Query: 371 XXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDKRKGKAVKRVAYKRNL 520
+ P R Y +G+L GWK+ + + L D+ K + K++L
Sbjct: 125 VKYTGNPNR-YVTLGKLLSMFGWKHAEAAKSLTDELKERESLASLQKKDL 173
Score = 46.8 bits (106), Expect = 5e-04
Identities = 23/57 (40%), Positives = 30/57 (52%)
Frame = +3
Query: 84 KGTKLLWFAANKLNISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVR 254
+G ++ A + G+ R K +L KRC VNP RGPFHFR P L K +R
Sbjct: 29 EGVRVTVVCAEEAVFVGSLERAMDKFKQYLNKRCLVNPRRGPFHFREPRMHLAKIIR 85
>UniRef50_O18718 Cluster: Ribosomal protein L13A; n=4;
Entamoeba|Rep: Ribosomal protein L13A - Entamoeba dispar
Length = 87
Score = 53.2 bits (122), Expect = 5e-06
Identities = 24/40 (60%), Positives = 31/40 (77%)
Frame = +2
Query: 5 SNKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQTQ 124
+NK VID GH+LGR+A+V+AK LL G K+V+VRCE Q
Sbjct: 8 NNKVTVIDCHGHVLGRVASVVAKHLLLGQKIVLVRCEDLQ 47
Score = 38.7 bits (86), Expect = 0.13
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +3
Query: 87 GTKLLWFAANKLNISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWK 245
G K++ L + G ++ + RKR N NP RG FH R+P++++ K
Sbjct: 35 GQKIVLVRCEDLQVCGTLKMRLVQWELYQRKRVNTNPTRGAFHHRSPAEMVRK 87
>UniRef50_O59300 Cluster: 50S ribosomal protein L13P; n=45;
root|Rep: 50S ribosomal protein L13P - Pyrococcus
horikoshii
Length = 142
Score = 51.6 bits (118), Expect = 2e-05
Identities = 43/147 (29%), Positives = 68/147 (46%), Gaps = 5/147 (3%)
Frame = +2
Query: 20 VIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQ---TQHLWQLL*EQTQAYVIPA*EVQR 190
+I+ G +LGRLA+ +AK+LLEG +VV+V E+ T + + + Q + R
Sbjct: 3 IINADGLILGRLASRVAKMLLEGEEVVIVNAEKAVITGNREVIFSKYKQRTGLRTLTNPR 62
Query: 191 ESCSWTFPF*SSI*DSM--EDCKSMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXX 364
PF D + + M+P KT+RG+ A RRL+ Y G P F +
Sbjct: 63 RG-----PFYPKRSDEIVRRTIRGMLPWKTDRGRKAFRRLKVYVGIPKEFQDKQLETIVE 117
Query: 365 XXXXFCLKPGRNYCHVGRLSHEIGWKY 445
+P Y VG ++ +G K+
Sbjct: 118 AHVSRLSRP--KYVTVGEVAKFLGGKF 142
>UniRef50_A1RWV8 Cluster: Ribosomal protein L13; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L13 - Thermofilum
pendens (strain Hrk 5)
Length = 154
Score = 50.8 bits (116), Expect = 3e-05
Identities = 23/36 (63%), Positives = 31/36 (86%)
Frame = +2
Query: 11 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQ 118
+AIVIDG GH+ GRLA+V+AK LL+G++VVVV E+
Sbjct: 6 EAIVIDGTGHIAGRLASVVAKRLLKGDRVVVVNAEK 41
>UniRef50_Q9YB50 Cluster: 50S ribosomal protein L13P; n=1; Aeropyrum
pernix|Rep: 50S ribosomal protein L13P - Aeropyrum
pernix
Length = 155
Score = 49.6 bits (113), Expect = 7e-05
Identities = 42/148 (28%), Positives = 67/148 (45%), Gaps = 4/148 (2%)
Frame = +2
Query: 11 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQTQHLW--QLL*EQTQAYVIPA*EV 184
+ IV+DG G ++GRLA+V+AK+LL G +V VV E+ +++ E + V+
Sbjct: 9 REIVVDGSGMIMGRLASVVAKLLLAGWRVNVVNAEKIVLSGDPRMVVESYRTTVLGV--K 66
Query: 185 QRESCSWTFPF*SSI*DSM--EDCKSMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXX 358
S W P + + M+P RG+ AL RLR Y G P D
Sbjct: 67 SHFSHKWR-PKRPRTPQRLFKHAVRGMLPKNKARGRRALARLRVYVGVP---DELKGREF 122
Query: 359 XXXXXXFCLKPGRNYCHVGRLSHEIGWK 442
+ +Y +G ++ ++GWK
Sbjct: 123 VRFPEADASRLSSHYIELGAVARQLGWK 150
>UniRef50_A0RXP5 Cluster: Ribosomal protein L13; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L13 - Cenarchaeum
symbiosum
Length = 139
Score = 48.4 bits (110), Expect = 2e-04
Identities = 38/142 (26%), Positives = 63/142 (44%), Gaps = 2/142 (1%)
Frame = +2
Query: 20 VIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQTQHLWQ--LL*EQTQAYVIPA*EVQRE 193
++D H+ GRLA+ +AK+LLEGN+V ++ CE+ + + + + ++ A + E
Sbjct: 1 MVDATDHIAGRLASNVAKMLLEGNRVSIINCEKVMISGKRASIVREYRDFLKIASIIHPE 60
Query: 194 SCSWTFPF*SSI*DSMEDCKSMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXX 373
+ +I M + M+P K GK A RLR Y G P +
Sbjct: 61 HGPYHPRRPDTIMTRM--IRGMLPRKKPSGKAAHSRLRAYIGSPGHLKSFEKRKLKGAE- 117
Query: 374 XFCLKPGRNYCHVGRLSHEIGW 439
+P NY + L +GW
Sbjct: 118 --ITRPTANYTTMADLGETVGW 137
>UniRef50_Q53K43 Cluster: Retrotransposon protein, putative,
unclassified; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Retrotransposon protein, putative,
unclassified - Oryza sativa subsp. japonica (Rice)
Length = 512
Score = 47.6 bits (108), Expect = 3e-04
Identities = 21/51 (41%), Positives = 28/51 (54%)
Frame = +2
Query: 278 RGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHE 430
RG+ AL RL+ Y+G PPP+D L+PG YC +G+LS E
Sbjct: 9 RGEAALARLKAYEGVPPPYDRTKRMVIPDALKVLRLQPGHKYCLLGQLSKE 59
>UniRef50_O29137 Cluster: 50S ribosomal protein L13P; n=1;
Archaeoglobus fulgidus|Rep: 50S ribosomal protein L13P -
Archaeoglobus fulgidus
Length = 156
Score = 47.2 bits (107), Expect = 4e-04
Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Frame = +2
Query: 20 VIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQ---TQHLWQLL*EQTQAYVIPA*EVQR 190
VID GH+LGRL++ IAK LL G ++VVV E+ T + + + Y +
Sbjct: 18 VIDASGHILGRLSSKIAKRLLNGERIVVVNAEKAVITGDKYMVFERYKEKYD----RGSK 73
Query: 191 ESCSWTFPF*SSI*DSMEDCKSMIPHKTERGKNALRRLRTYDGCP 325
E + FP + M+P K+ RG++A RRLR + G P
Sbjct: 74 EKGPY-FPRHPER-IFKRTVRGMLPWKSSRGRDAYRRLRVFMGVP 116
>UniRef50_Q8PW45 Cluster: 50S ribosomal protein L13P; n=11;
Euryarchaeota|Rep: 50S ribosomal protein L13P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 140
Score = 46.8 bits (106), Expect = 5e-04
Identities = 38/145 (26%), Positives = 67/145 (46%), Gaps = 3/145 (2%)
Frame = +2
Query: 20 VIDGRGHLLGRLAAVIAKVLLEGN-KVVVVRCEQTQHLWQLL*EQTQAYVIPA*EVQRES 196
VID +G +LGRLA+ +AK LL G+ KV ++ E+ ++ A + E +
Sbjct: 3 VIDAKGLILGRLASSVAKQLLSGDEKVYIINAEKA-----IISGSRAATLREYRETRDRG 57
Query: 197 CSWTFPF*SSI*DSM--EDCKSMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 370
+ P+ D + + M+P+K RG++A+ RL+ Y G P++
Sbjct: 58 ATEFGPYFPKRPDRILKRTIRGMLPYKRARGRDAMSRLKVYVGV--PYELKGAETTTIAD 115
Query: 371 XXFCLKPGRNYCHVGRLSHEIGWKY 445
L Y +G +S ++G K+
Sbjct: 116 ADMRLLSSNKYVELGEVSQKMGSKF 140
>UniRef50_A7DRR6 Cluster: Ribosomal protein L13; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L13
- Candidatus Nitrosopumilus maritimus SCM1
Length = 154
Score = 46.4 bits (105), Expect = 6e-04
Identities = 38/149 (25%), Positives = 69/149 (46%), Gaps = 4/149 (2%)
Frame = +2
Query: 5 SNKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQTQHLW---QLL*EQTQAYVIPA 175
+++ IV+D H+ GRL++ +AK+L +G++V +V CE+ + L+ E + I +
Sbjct: 10 TDRPIVVDATNHIAGRLSSNVAKLLKQGHRVSIVNCEKIMYSGTRSNLIKEYREFLEINS 69
Query: 176 *EVQRESCSWTFPF*SSI*DSMEDCKSMIPH-KTERGKNALRRLRTYDGCPPPFDNXXXX 352
+ + + +I M + M+P+ + GK +++RLR Y G P +
Sbjct: 70 -IINPKHGPVHYRRPDTIITKM--IRQMLPYDRKPSGKESIKRLRAYIGSPKELKSLEKI 126
Query: 353 XXXXXXXXFCLKPGRNYCHVGRLSHEIGW 439
K NY +G L IGW
Sbjct: 127 QFEKAKIK---KSPSNYTTMGELCRVIGW 152
>UniRef50_Q8TVB6 Cluster: 50S ribosomal protein L13P; n=1;
Methanopyrus kandleri|Rep: 50S ribosomal protein L13P -
Methanopyrus kandleri
Length = 159
Score = 44.4 bits (100), Expect = 0.003
Identities = 39/143 (27%), Positives = 64/143 (44%), Gaps = 2/143 (1%)
Frame = +2
Query: 20 VIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQTQHLWQLL*EQTQAYVIPA*EVQRESC 199
VID +LGRLA+V+AK +L+G ++ V+ E+ + ++ ++QR
Sbjct: 17 VIDAENAVLGRLASVVAKRILKGERIAVINTEKA----IITGKKNTIKEEWLQKIQRGDP 72
Query: 200 SWTFPF*SSI*DSM--EDCKSMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXX 373
PF D + + M+P KT+RG+ A +RLR Y G P +
Sbjct: 73 K-KGPFYPRRPDLIFRRVVRGMLPWKTKRGREAFKRLRAYIGTPRWVEEANIEPERVAEA 131
Query: 374 XFCLKPGRNYCHVGRLSHEIGWK 442
Y +G LS E+G++
Sbjct: 132 DMSRLGHLWYVTLGELSEELGYQ 154
>UniRef50_Q9AVH9 Cluster: Putative senescence-associated protein;
n=1; Pisum sativum|Rep: Putative senescence-associated
protein - Pisum sativum (Garden pea)
Length = 255
Score = 44.0 bits (99), Expect = 0.003
Identities = 25/63 (39%), Positives = 32/63 (50%)
Frame = +3
Query: 126 ISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRV*SHTKQSVARMLLGGY 305
ISG R K+K M FLR+R N P+ GP F + HT+ SVAR+ L G
Sbjct: 29 ISGGLGRQKMKYMRFLRRRMNTKPSHGPITFVLHPRSFGALFVEWFHTRPSVARLHLLGC 88
Query: 306 VHM 314
+M
Sbjct: 89 KYM 91
>UniRef50_Q3LWM1 Cluster: Ribosomal protein L13A; n=1; Bigelowiella
natans|Rep: Ribosomal protein L13A - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 181
Score = 38.7 bits (86), Expect = 0.13
Identities = 18/35 (51%), Positives = 25/35 (71%)
Frame = +2
Query: 11 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCE 115
K IVIDGR L+GRLA+ I +L +G + V+RC+
Sbjct: 3 KTIVIDGRNQLIGRLASNIVILLKKGYTLKVIRCK 37
>UniRef50_Q9M3S6 Cluster: 60S L13 ribosomal protein; n=1;
Arabidopsis thaliana|Rep: 60S L13 ribosomal protein -
Arabidopsis thaliana (Mouse-ear cress)
Length = 61
Score = 37.9 bits (84), Expect = 0.22
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +2
Query: 422 SHEIGWKYRDVVRKLEDKRKGKAVKRVAYKRNLRGSPRMLVRRCRRR 562
+HE+GW+Y+ +V KLE+KRK K K+ R + + + +
Sbjct: 1 AHEVGWQYQGIVEKLEEKRKVKGTAYYTKKKAEMKLKRQAIEKAKAK 47
>UniRef50_P95991 Cluster: 50S ribosomal protein L13P; n=3;
Sulfolobaceae|Rep: 50S ribosomal protein L13P -
Sulfolobus solfataricus
Length = 149
Score = 36.3 bits (80), Expect = 0.67
Identities = 13/36 (36%), Positives = 26/36 (72%)
Frame = +2
Query: 11 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQ 118
+ ++I+ G +LGR+A+ + ++L EG KV++V E+
Sbjct: 8 QVVIINAEGQILGRMASNVVRLLKEGKKVIIVNGEK 43
>UniRef50_Q8ZYQ1 Cluster: 50S ribosomal protein L13P; n=5;
Thermoproteaceae|Rep: 50S ribosomal protein L13P -
Pyrobaculum aerophilum
Length = 187
Score = 36.3 bits (80), Expect = 0.67
Identities = 17/36 (47%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
Frame = +2
Query: 17 IVIDGRGHLLGRLAAVIAKVLLE--GNKVVVVRCEQ 118
+++D GH+ GRLA IAK LLE ++VVV E+
Sbjct: 19 VIVDAEGHVAGRLATYIAKALLERPNLRIVVVNAEK 54
>UniRef50_P39473 Cluster: 50S ribosomal protein L13P; n=4;
Thermoprotei|Rep: 50S ribosomal protein L13P -
Sulfolobus acidocaldarius
Length = 148
Score = 34.3 bits (75), Expect = 2.7
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +2
Query: 17 IVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQ 118
+++D +LGR++ IAK+L G KV VV E+
Sbjct: 8 VIVDATNQILGRMSTHIAKLLKSGKKVYVVNAEK 41
>UniRef50_Q6L294 Cluster: 50S ribosomal protein L13P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L13P -
Picrophilus torridus
Length = 138
Score = 33.9 bits (74), Expect = 3.6
Identities = 25/110 (22%), Positives = 44/110 (40%), Gaps = 2/110 (1%)
Frame = +2
Query: 17 IVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQTQHLWQLL*EQTQAYVIPA*EVQRES 196
I ID H+ GRL++ +AK LL G + +V + ++ + + + ++
Sbjct: 2 IYIDASNHIYGRLSSYVAKKLLNGESITIVNASKV-----VITGRKEFIIDKFNNLRNTG 56
Query: 197 CSWTFPF*SSI*DSM--EDCKSMIPHKTERGKNALRRLRTYDGCPPPFDN 340
P+ D + M+P K G AL+R Y P +N
Sbjct: 57 SIRKGPYYPKTADRILKRSIGDMLPKKKTHGMEALKRCMVYANVPKSLEN 106
>UniRef50_A6E637 Cluster: Integrins alpha chain; n=1; Roseovarius sp.
TM1035|Rep: Integrins alpha chain - Roseovarius sp.
TM1035
Length = 2134
Score = 33.1 bits (72), Expect = 6.2
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +2
Query: 419 LSHEIGWKYRDVVRKLEDKRKGKAVKRVAYKRNLRGSPRMLVRRCRR 559
L EI + Y + RKL + + KR AY+ L G+P M++ RR
Sbjct: 1156 LGMEINYDYDALGRKLRELSADGSEKRYAYRFGLNGAPSMILTSLRR 1202
>UniRef50_A3Y6T2 Cluster: Sensory box/GGDEF/GAF/EAL domain protein;
n=1; Marinomonas sp. MED121|Rep: Sensory
box/GGDEF/GAF/EAL domain protein - Marinomonas sp.
MED121
Length = 413
Score = 33.1 bits (72), Expect = 6.2
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = -2
Query: 193 FTLHLLRRNDISLSLFLKKLPEMLSLFAANHNNFVPFEKDLGDDCRQTAQQMTTAIDHYG 14
FTLH+ +ND FL + LS+F A + N V + DC Q + + + +
Sbjct: 103 FTLHIQYKNDPKFIAFLTQAQYQLSMFIALNQNIVLKQHFTNFDCSQCSSRQSEIFETVN 162
Query: 13 L 11
L
Sbjct: 163 L 163
>UniRef50_A5BYS2 Cluster: Putative uncharacterized protein; n=3;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 258
Score = 33.1 bits (72), Expect = 6.2
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +2
Query: 395 RNYCHVGRLSHEIGWKYRDVVRKLEDKRKGKAVKRVAYKR--NLRGSPRMLVRRC 553
R CH ++S +G+KYR+ +R + + A R KR L S R++ RC
Sbjct: 7 RAXCHSIKISPSVGYKYREALRTISQVKTWSAKFRRCTKRAAKLLRSKRLVPHRC 61
>UniRef50_Q92Z94 Cluster: Putative uncharacterized protein; n=1;
Sinorhizobium meliloti|Rep: Putative uncharacterized
protein - Rhizobium meliloti (Sinorhizobium meliloti)
Length = 153
Score = 32.7 bits (71), Expect = 8.2
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 1/87 (1%)
Frame = -2
Query: 283 ATLCFVWDHTLTVFHRILDGALKWKGPRAGFTLHLLRRNDISLSLFLKKLPE-MLSLFAA 107
A LC LT+ H I+ G + R +L+RR L+ +PE M++LF A
Sbjct: 3 AKLCRNLGGRLTILHVIMHGLRAEEASRLAEEEYLVRRVSAVTLPDLQPIPETMVNLFRA 62
Query: 106 NHNNFVPFEKDLGDDCRQTAQQMTTAI 26
+H + LGD + A + +I
Sbjct: 63 SHGDLGEMVSILGDRIVEEAAESARSI 89
>UniRef50_Q60TB9 Cluster: Putative uncharacterized protein CBG20539;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG20539 - Caenorhabditis
briggsae
Length = 668
Score = 32.7 bits (71), Expect = 8.2
Identities = 23/76 (30%), Positives = 28/76 (36%), Gaps = 3/76 (3%)
Frame = -1
Query: 473 CLQAYEQHHGISIQFHGT-VCLHDSNYGQVSDRRHVEQQALQHVDGYQREEGTHHM--YV 303
CL Y HHG Q HGT HD + H E GTHH Y
Sbjct: 450 CLAYYGTHHGTHDQSHGTHGGYHDPAHHGTHHATHYESHGTHGGYHDPAHHGTHHATHYE 509
Query: 302 AS*EHSCHALFCVGSY 255
+ H H+L G++
Sbjct: 510 SHGTHGHHSLAYYGTH 525
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 662,668,571
Number of Sequences: 1657284
Number of extensions: 13199231
Number of successful extensions: 34558
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 33431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34533
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51239674196
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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