Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00328
         (668 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051640-1|AAK93064.1|  205|Drosophila melanogaster GM13948p pro...   138   5e-33
AE014297-307|AAF51987.1|  205|Drosophila melanogaster CG1475-PB ...   138   5e-33
BT024389-1|ABC86451.1|  122|Drosophila melanogaster IP05464p pro...    31   1.4  
AE014296-2959|AAN11699.1|  419|Drosophila melanogaster CG32182-P...    31   1.4  
AE014296-2379|AAF49745.1|  102|Drosophila melanogaster CG13482-P...    31   1.4  

>AY051640-1|AAK93064.1|  205|Drosophila melanogaster GM13948p
           protein.
          Length = 205

 Score =  138 bits (335), Expect = 5e-33
 Identities = 75/175 (42%), Positives = 100/175 (57%), Gaps = 2/175 (1%)
 Frame = +2

Query: 5   SNKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQTQHLWQLL*EQTQ--AYVIPA* 178
           +N+ +VIDGRGHLLGRLA+V+AK LL+G KV VVRCE+          + +  AY+    
Sbjct: 5   TNRTVVIDGRGHLLGRLASVVAKYLLQGGKVAVVRCEELNLSGHFYRNKIKFLAYLRKRC 64

Query: 179 EVQRESCSWTFPF*SSI*DSMEDCKSMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXX 358
            V      + F   S I    +  + MIPHKT+RG+ AL RLR +DG P P+D       
Sbjct: 65  NVNPARGPFHFRAPSRI--FYKAVRGMIPHKTKRGQAALARLRVFDGIPSPYDKRRRVVV 122

Query: 359 XXXXXXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDKRKGKAVKRVAYKRNLR 523
                   L+  R YC VGRLSHE+GW Y+DV++ LE KRK K    + + R L+
Sbjct: 123 PIAMRVLTLRSDRKYCQVGRLSHEVGWHYQDVIKSLERKRKAKLRVTLKHNRELK 177



 Score = 85.4 bits (202), Expect = 6e-17
 Identities = 35/57 (61%), Positives = 47/57 (82%)
 Frame = +3

Query: 84  KGTKLLWFAANKLNISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVR 254
           +G K+      +LN+SG+F+RNK+K +++LRKRCNVNPARGPFHFRAPS+I +K VR
Sbjct: 31  QGGKVAVVRCEELNLSGHFYRNKIKFLAYLRKRCNVNPARGPFHFRAPSRIFYKAVR 87



 Score = 37.1 bits (82), Expect = 0.022
 Identities = 15/30 (50%), Positives = 22/30 (73%)
 Frame = +1

Query: 511 KKLKRITKDAGEKVSKATTPFTTIIQSYGY 600
           ++LK++T  A E ++KA  PF  II+SYGY
Sbjct: 174 RELKKLTVKARENIAKAAEPFNKIIKSYGY 203


>AE014297-307|AAF51987.1|  205|Drosophila melanogaster CG1475-PB
           protein.
          Length = 205

 Score =  138 bits (335), Expect = 5e-33
 Identities = 75/175 (42%), Positives = 100/175 (57%), Gaps = 2/175 (1%)
 Frame = +2

Query: 5   SNKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQTQHLWQLL*EQTQ--AYVIPA* 178
           +N+ +VIDGRGHLLGRLA+V+AK LL+G KV VVRCE+          + +  AY+    
Sbjct: 5   TNRTVVIDGRGHLLGRLASVVAKYLLQGGKVAVVRCEELNLSGHFYRNKIKFLAYLRKRC 64

Query: 179 EVQRESCSWTFPF*SSI*DSMEDCKSMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXX 358
            V      + F   S I    +  + MIPHKT+RG+ AL RLR +DG P P+D       
Sbjct: 65  NVNPARGPFHFRAPSRI--FYKAVRGMIPHKTKRGQAALARLRVFDGIPSPYDKRRRVVV 122

Query: 359 XXXXXXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDKRKGKAVKRVAYKRNLR 523
                   L+  R YC VGRLSHE+GW Y+DV++ LE KRK K    + + R L+
Sbjct: 123 PIAMRVLTLRSDRKYCQVGRLSHEVGWHYQDVIKSLERKRKAKLRVTLKHNRELK 177



 Score = 85.4 bits (202), Expect = 6e-17
 Identities = 35/57 (61%), Positives = 47/57 (82%)
 Frame = +3

Query: 84  KGTKLLWFAANKLNISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVR 254
           +G K+      +LN+SG+F+RNK+K +++LRKRCNVNPARGPFHFRAPS+I +K VR
Sbjct: 31  QGGKVAVVRCEELNLSGHFYRNKIKFLAYLRKRCNVNPARGPFHFRAPSRIFYKAVR 87



 Score = 37.1 bits (82), Expect = 0.022
 Identities = 15/30 (50%), Positives = 22/30 (73%)
 Frame = +1

Query: 511 KKLKRITKDAGEKVSKATTPFTTIIQSYGY 600
           ++LK++T  A E ++KA  PF  II+SYGY
Sbjct: 174 RELKKLTVKARENIAKAAEPFNKIIKSYGY 203


>BT024389-1|ABC86451.1|  122|Drosophila melanogaster IP05464p
           protein.
          Length = 122

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 13/50 (26%), Positives = 18/50 (36%)
 Frame = -1

Query: 461 YEQHHGISIQFHGTVCLHDSNYGQVSDRRHVEQQALQHVDGYQREEGTHH 312
           +  HHG  +  HG    H  +YG      H +     H   +    G HH
Sbjct: 66  HHHHHGPPMHHHGPPPHHHHHYGPPPPPPHYDHHHHHHGSHFDHHHGPHH 115


>AE014296-2959|AAN11699.1|  419|Drosophila melanogaster CG32182-PA
           protein.
          Length = 419

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = -2

Query: 295 KSILATLCFVWDHTLTVFHRILDGALKWKGPRAGFTLHLLR 173
           K +     F W   LTV + + DG++KW   R      LLR
Sbjct: 278 KEVFRLQSFAWHSQLTVHYDVADGSVKWMPQRPQAVRSLLR 318


>AE014296-2379|AAF49745.1|  102|Drosophila melanogaster CG13482-PA
           protein.
          Length = 102

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 13/50 (26%), Positives = 18/50 (36%)
 Frame = -1

Query: 461 YEQHHGISIQFHGTVCLHDSNYGQVSDRRHVEQQALQHVDGYQREEGTHH 312
           +  HHG  +  HG    H  +YG      H +     H   +    G HH
Sbjct: 46  HHHHHGPPMHHHGPPPHHHHHYGPPPPPPHYDHHHHHHGSHFDHHHGPHH 95


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,017,894
Number of Sequences: 53049
Number of extensions: 635097
Number of successful extensions: 1789
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1708
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1789
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2889369000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)