Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00327
         (702 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_01_0168 - 1874297-1874645,1874968-1875137,1875688-1875807,187...    31   0.89 
04_02_0012 + 8537124-8537464,8537558-8537693,8538811-8538861,854...    30   2.0  
10_08_0649 + 19589807-19591024                                         29   3.6  
03_02_0448 + 8593574-8594203,8595027-8595246,8595950-8595999           28   6.2  
11_08_0077 - 28180918-28183269,28183553-28184608                       28   8.3  
10_08_0645 - 19562886-19564484                                         28   8.3  
08_01_0024 + 180749-180872,181826-181880,181936-182025,182075-18...    28   8.3  

>04_01_0168 -
           1874297-1874645,1874968-1875137,1875688-1875807,
           1876750-1876812
          Length = 233

 Score = 31.1 bits (67), Expect = 0.89
 Identities = 16/46 (34%), Positives = 22/46 (47%)
 Frame = -1

Query: 402 P*TRVNVTGASGNSMSRRTCLDSPTFNTATGSFTASCSDMASTCIT 265
           P T  + T A   S S + C DSPT +T++G  T +     S   T
Sbjct: 4   PTTSYSTTSAMERSNSTKRCSDSPTVSTSSGRVTTTAWSSTSGAAT 49


>04_02_0012 +
           8537124-8537464,8537558-8537693,8538811-8538861,
           8540190-8540413,8540491-8540715,8541520-8541619,
           8541703-8541763,8543029-8543100,8543183-8543406
          Length = 477

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 17/59 (28%), Positives = 23/59 (38%)
 Frame = -1

Query: 432 WCPIKCTGPEP*TRVNVTGASGNSMSRRTCLDSPTFNTATGSFTASCSDMASTCITFNS 256
           W P +C G  P      + ASG+ +     +  P FN A  SF        S  +  NS
Sbjct: 141 WLPCQCDGCTP----PASAASGSQVGTEYLITRPLFNPARASFYIPSMSSTSQAVPCNS 195


>10_08_0649 + 19589807-19591024
          Length = 405

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 394 CSGFGASTLNWTPSPW 441
           C+G+GA+  +W P PW
Sbjct: 31  CAGWGAAAASWRPRPW 46


>03_02_0448 + 8593574-8594203,8595027-8595246,8595950-8595999
          Length = 299

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 11/37 (29%), Positives = 22/37 (59%)
 Frame = +2

Query: 182 GKSRIPTQQQARHSSSIVRSRCQTNELNVIQVEAMSL 292
           G + +P  +Q  HS+ ++++R   +  NV+Q +A  L
Sbjct: 141 GVAAVPGFEQPAHSTRLLQTRVIVDRFNVLQADAQDL 177


>11_08_0077 - 28180918-28183269,28183553-28184608
          Length = 1135

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 13/44 (29%), Positives = 26/44 (59%)
 Frame = +2

Query: 224 SSIVRSRCQTNELNVIQVEAMSLQEAVKLPVAVLKVGESRHVRL 355
           S I R     ++L ++Q   +  +  V+LP +++K+G+ RH+ L
Sbjct: 619 SDIARLLQNISKLKLLQYLEIISENLVRLPNSIVKLGQLRHLDL 662


>10_08_0645 - 19562886-19564484
          Length = 532

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = -2

Query: 671 GDGTTSPKWVSRRFVH 624
           GDG  SPKW S  F H
Sbjct: 186 GDGAPSPKWTSAPFTH 201


>08_01_0024 +
           180749-180872,181826-181880,181936-182025,182075-182426,
           182913-183000,183162-183294,183394-184089,184305-184368,
           184489-184578
          Length = 563

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +1

Query: 124 NFSMVSPFHHHISQRHGIQRQKQNTHAATSSSFVKH 231
           NF +++      SQ    Q+Q+Q  HA++SSS   H
Sbjct: 458 NFQLIAAASSESSQLEQQQQQQQQNHASSSSSASDH 493


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,722,689
Number of Sequences: 37544
Number of extensions: 349394
Number of successful extensions: 922
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 922
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1803843684
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)