Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00327
         (702 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79605-7|CAB01908.1| 1440|Caenorhabditis elegans Hypothetical pr...    32   0.46 
Z79604-7|CAB01901.1| 1440|Caenorhabditis elegans Hypothetical pr...    32   0.46 
Z29967-1|CAA82854.1| 1440|Caenorhabditis elegans lin-15B protein.      32   0.46 
U10413-1|AAA20089.1| 1440|Caenorhabditis elegans lin-15B protein...    32   0.46 
U10412-1|AAA20088.1| 1440|Caenorhabditis elegans lin-15B protein...    32   0.46 
AF016445-9|AAC69061.1|  156|Caenorhabditis elegans Hypothetical ...    30   1.4  
Z81513-5|CAB04175.1|  332|Caenorhabditis elegans Hypothetical pr...    29   3.2  
AL132952-7|CAB61139.2|  670|Caenorhabditis elegans Hypothetical ...    29   3.2  
U70856-4|AAB09167.1| 2090|Caenorhabditis elegans Hypothetical pr...    29   4.3  
U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four) int...    29   4.3  
AF098999-6|AAC68724.2|  787|Caenorhabditis elegans Half transpor...    28   5.6  
Z22174-2|CAA80130.2|  410|Caenorhabditis elegans Hypothetical pr...    27   9.8  

>Z79605-7|CAB01908.1| 1440|Caenorhabditis elegans Hypothetical
           protein ZK662.4 protein.
          Length = 1440

 Score = 31.9 bits (69), Expect = 0.46
 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = -3

Query: 619 WHSSWA-MQLCLWHYSTFSLFCPWVHLLHYLHP*TENH 509
           WHS+   +  CL  + TF+ FC  + +LHY+   T NH
Sbjct: 291 WHSTAIFLTRCLVWHDTFTEFCGKLDILHYIDNETFNH 328


>Z79604-7|CAB01901.1| 1440|Caenorhabditis elegans Hypothetical
           protein ZK662.4 protein.
          Length = 1440

 Score = 31.9 bits (69), Expect = 0.46
 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = -3

Query: 619 WHSSWA-MQLCLWHYSTFSLFCPWVHLLHYLHP*TENH 509
           WHS+   +  CL  + TF+ FC  + +LHY+   T NH
Sbjct: 291 WHSTAIFLTRCLVWHDTFTEFCGKLDILHYIDNETFNH 328


>Z29967-1|CAA82854.1| 1440|Caenorhabditis elegans lin-15B protein.
          Length = 1440

 Score = 31.9 bits (69), Expect = 0.46
 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = -3

Query: 619 WHSSWA-MQLCLWHYSTFSLFCPWVHLLHYLHP*TENH 509
           WHS+   +  CL  + TF+ FC  + +LHY+   T NH
Sbjct: 291 WHSTAIFLTRCLVWHDTFTEFCGKLDILHYIDNETFNH 328


>U10413-1|AAA20089.1| 1440|Caenorhabditis elegans lin-15B protein
           protein.
          Length = 1440

 Score = 31.9 bits (69), Expect = 0.46
 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = -3

Query: 619 WHSSWA-MQLCLWHYSTFSLFCPWVHLLHYLHP*TENH 509
           WHS+   +  CL  + TF+ FC  + +LHY+   T NH
Sbjct: 291 WHSTAIFLTRCLVWHDTFTEFCGKLDILHYIDNETFNH 328


>U10412-1|AAA20088.1| 1440|Caenorhabditis elegans lin-15B protein
           protein.
          Length = 1440

 Score = 31.9 bits (69), Expect = 0.46
 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = -3

Query: 619 WHSSWA-MQLCLWHYSTFSLFCPWVHLLHYLHP*TENH 509
           WHS+   +  CL  + TF+ FC  + +LHY+   T NH
Sbjct: 291 WHSTAIFLTRCLVWHDTFTEFCGKLDILHYIDNETFNH 328


>AF016445-9|AAC69061.1|  156|Caenorhabditis elegans Hypothetical
           protein T05B4.13 protein.
          Length = 156

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 16/37 (43%), Positives = 23/37 (62%)
 Frame = -1

Query: 366 NSMSRRTCLDSPTFNTATGSFTASCSDMASTCITFNS 256
           N+  +RTC   P+  TA+ S TAS S   STC ++N+
Sbjct: 87  NTYCQRTCGRCPSSTTASSSSTASSS---STCTSYNA 120


>Z81513-5|CAB04175.1|  332|Caenorhabditis elegans Hypothetical
           protein F26D2.4 protein.
          Length = 332

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = -2

Query: 692 RYNYT*NGDGTTSPKWVSRRFVHFLAFFLGDAA-LPLALFD 573
           RYNY    D T+  + + R   HF+ + L   A LP AL D
Sbjct: 120 RYNYLVRTDSTSQSRKIKRVIQHFINYLLAFLAFLPAALED 160


>AL132952-7|CAB61139.2|  670|Caenorhabditis elegans Hypothetical
           protein Y51H4A.7 protein.
          Length = 670

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
 Frame = +1

Query: 19  KICMGDSTHWI*VQRVARERVAKNLNKLVKSS*RTNFSMVSPFHHHISQRHGIQRQKQNT 198
           K+ +G     +   R  R  +A   N+LVKS   +   ++S  HH +S      R+  N 
Sbjct: 498 KLVVGSQARILYSDRAGRVALASAFNELVKSGKVSAAIVISRDHHDVSGTDSPFRETSNV 557

Query: 199 H---AATSSSFVKHC 234
           +   A T+   V++C
Sbjct: 558 YDGSAFTADMAVQNC 572


>U70856-4|AAB09167.1| 2090|Caenorhabditis elegans Hypothetical
           protein F57F4.4 protein.
          Length = 2090

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
 Frame = +1

Query: 343 ACTS--GH*IPRCACYIYSCSGFGASTLNWTPSPW 441
           ACT+  G  I  C CY   C+         TPSPW
Sbjct: 185 ACTNLAGTNIQGCCCYKQDCTSLAPMNNPPTPSPW 219


>U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four)
           interacting proteinprotein 1 protein.
          Length = 2153

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
 Frame = +1

Query: 343 ACTS--GH*IPRCACYIYSCSGFGASTLNWTPSPW 441
           ACT+  G  I  C CY   C+         TPSPW
Sbjct: 185 ACTNLAGTNIQGCCCYKQDCTSLAPMNNPPTPSPW 219


>AF098999-6|AAC68724.2|  787|Caenorhabditis elegans Half transporter
           (pgp related)protein 4 protein.
          Length = 787

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
 Frame = -1

Query: 441 PRRWCPIKCTGPEP*TRVNVTGAS-GNSMSRRTCLDSPTFNTATGSFTA 298
           PR+   +  +GP+P   +NV G S GN+MS    L S +F+ +  S T+
Sbjct: 742 PRKRPAVARSGPQPAASINVAGPSQGNAMS----LLSTSFSQSASSVTS 786


>Z22174-2|CAA80130.2|  410|Caenorhabditis elegans Hypothetical
           protein K01B6.3 protein.
          Length = 410

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -3

Query: 610 SWAMQLCLWHYSTFSLFCPWVHLLHY 533
           SWA+ +C+   STF+L C    +LHY
Sbjct: 80  SWALLVCIIE-STFALICFLAVMLHY 104


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,722,725
Number of Sequences: 27780
Number of extensions: 299512
Number of successful extensions: 824
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 822
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)