Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00324X
         (333 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   3.4  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   3.4  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    21   3.4  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    20   7.8  

>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.0 bits (42), Expect = 3.4
 Identities = 7/15 (46%), Positives = 13/15 (86%)
 Frame = -2

Query: 47  HKQLRKQSYVMYAFI 3
           +KQL K+SY++ +F+
Sbjct: 139 YKQLLKRSYLIISFV 153


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.0 bits (42), Expect = 3.4
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +3

Query: 96  LTILDSIMERRFQNSH 143
           +T + S+ ERR+ N+H
Sbjct: 45  ITEIYSVYERRYMNAH 60


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.0 bits (42), Expect = 3.4
 Identities = 7/15 (46%), Positives = 13/15 (86%)
 Frame = -2

Query: 47  HKQLRKQSYVMYAFI 3
           +KQL K+SY++ +F+
Sbjct: 139 YKQLLKRSYLIISFV 153


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 19.8 bits (39), Expect = 7.8
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +3

Query: 264 RVR*QKHTVLREHCRPICQ 320
           RV  Q    LR H R +CQ
Sbjct: 159 RVSAQMKADLRSHFRALCQ 177


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,680
Number of Sequences: 336
Number of extensions: 1750
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6473381
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)