Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00324X
         (333 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF034031-1|ABK32002.1|   70|Anopheles gambiae serpin 4A protein.       22   5.3  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    22   7.0  
L10440-1|AAA29360.1|  154|Anopheles gambiae transposase protein.       21   9.3  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    21   9.3  

>EF034031-1|ABK32002.1|   70|Anopheles gambiae serpin 4A protein.
          Length = 70

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = +2

Query: 71  IINMVTLNVDDFGQHHGETVSKFTWRASDGFSVSVIS 181
           I+  VTL+V++ G   G   +    R   G+S  V S
Sbjct: 10  IVTHVTLDVNEQGTEGGAVTAALIDRIGSGYSFLVDS 46


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +2

Query: 164 SVSVISYGATIQSIQVPDKYGITSDVVLGFE 256
           ++ VI    T Q     DKYG+ +   LGFE
Sbjct: 172 TLDVIGNANTPQYDDHDDKYGVPTLEELGFE 202


>L10440-1|AAA29360.1|  154|Anopheles gambiae transposase protein.
          Length = 154

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -2

Query: 101 RQHSKSPCLLFKTNDSSGHKQLRKQSYV 18
           R H K   +LF  +++  HK LR  + +
Sbjct: 115 RPHMKKKKVLFHQDNAPCHKSLRTMAKI 142


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = +2

Query: 179 SYGATIQSIQVPDKYGITSDVVLGFEKSTGTLTET 283
           S+ ATI + Q+P +     ++V  F +      ET
Sbjct: 31  SFDATIDAYQIPSRLEQLEELVSEFTELRKAFNET 65


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 379,765
Number of Sequences: 2352
Number of extensions: 7706
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 23342418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)