Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00323
         (724 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    25   0.82 
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    24   1.4  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    23   2.5  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    21   7.6  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 24.6 bits (51), Expect = 0.82
 Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
 Frame = +2

Query: 170 MCNCIKDCPYETDSRRMVCTNFNETWQSVAKYTASDAYASTT--LISAVVRNTTTFKSSI 343
           M NC K+CP    +   +  +     ++VA+Y   +    T    I  V+    T KS  
Sbjct: 727 MLNCWKECPKNRPTFTELSKSLEGLLENVAQYLQIENVEQTLNHEIKKVIPGRITQKSCS 786

Query: 344 TER 352
           T+R
Sbjct: 787 TKR 789


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 13/47 (27%), Positives = 19/47 (40%)
 Frame = +2

Query: 125 CSAARVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSVAKY 265
           C    VC I++ G  +C    DCP  T+         NE   +  K+
Sbjct: 385 CQNGGVCRISDGGGYIC----DCPSGTNGTNCEIDTINECDSNPCKH 427


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +2

Query: 194 PYETDSRRMVCTNFNETWQSVAKYTASDAY 283
           P E   R+ +    +E+  SVAK+TA+D +
Sbjct: 254 PEEAPQRKELLRFASESRGSVAKFTAADFF 283


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 10/36 (27%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
 Frame = +1

Query: 379 SEMSDFPRRMRDWLFNIMRDMAERREL---TPHYLK 477
           ++  DF + M D++   + ++ +RR L    P YL+
Sbjct: 4   NQFKDFAKEMIDYVSGYLENIRDRRVLPTVEPGYLR 39


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,691
Number of Sequences: 336
Number of extensions: 3645
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)