Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00323
         (724 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    26   0.41 
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    24   1.3  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   3.9  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    22   5.1  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    22   6.7  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    22   6.7  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   8.9  

>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 25.8 bits (54), Expect = 0.41
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = +2

Query: 137 RVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNET 244
           +VC    H D+ C C+       DS   V  NFNE+
Sbjct: 344 QVCRSRRHSDSCCLCL-------DSMNAVIRNFNES 372


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 9/46 (19%), Positives = 22/46 (47%)
 Frame = +3

Query: 459 DPSLPEDGAGGGIKPHARWANAAIWKWCDLDAQTNDRFVSRHELFP 596
           +  LP+  +   ++P ++   + +W+ C   +   +   SR + FP
Sbjct: 80  EEKLPKTSSNASVEPDSKVTYSGLWRVCVAISSRMEYECSRIDYFP 125


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = +1

Query: 124  LQRSTCLRNQRTRRRHV*L-HQGLSLRDRLQTHGVHKLQRNLAIGCEVYR 270
            LQ   C+R +RT++R+V    +   L   + T G H    N+   C ++R
Sbjct: 1645 LQDHDCIRQERTQQRNVISDSESGRLDTEMSTWGYH---HNVNKHCTIHR 1691



 Score = 21.8 bits (44), Expect = 6.7
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +1

Query: 337 EYYGTCREMPDCTESEMSDFPRRMRD 414
           +Y    + MPD  E+E+SD    +RD
Sbjct: 74  QYARVQQSMPDGWETEISDQMLELRD 99


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 9/28 (32%), Positives = 12/28 (42%)
 Frame = +2

Query: 143 CEINEHGDAMCNCIKDCPYETDSRRMVC 226
           C   EH       + DC  E  +RR +C
Sbjct: 301 CVSGEHLSVSGGALNDCHAEVVARRCLC 328


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -2

Query: 456 LSTFSHVAHDVKKPVPHATGEVRH 385
           +++FSH + DVK  +  ATG   H
Sbjct: 276 IASFSHRSIDVKDGIVLATGITVH 299


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -2

Query: 456 LSTFSHVAHDVKKPVPHATGEVRH 385
           +++FSH + DVK  +  ATG   H
Sbjct: 276 IASFSHRSIDVKDGIVLATGITVH 299


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +1

Query: 541 AIWTLRPMIDSCPVTSCSP 597
           A+W L   I S P+  C P
Sbjct: 162 AVWVLAGAITSPPLLGCFP 180


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,013
Number of Sequences: 438
Number of extensions: 4571
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22413960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)