Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00322
         (292 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   1.2  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    22   1.2  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   2.7  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    19   8.2  

>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 22.2 bits (45), Expect = 1.2
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 223 SDNMKIICNVSTNCTSTLKK 282
           SDN+ I+C +    TS ++K
Sbjct: 227 SDNLYILCRLHYKLTSVMQK 246


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 22.2 bits (45), Expect = 1.2
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 223 SDNMKIICNVSTNCTSTLKK 282
           SDN+ I+C +    TS ++K
Sbjct: 227 SDNLYILCRLHYKLTSVMQK 246


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.0 bits (42), Expect = 2.7
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -3

Query: 125 CHINSKSVTIHLDGGFYLYICD 60
           C+IN     I+L GGF+   CD
Sbjct: 219 CYINC---LIYLIGGFWFMQCD 237


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 19.4 bits (38), Expect = 8.2
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 80  FYLYICDELSAFTAEWLV 27
           FYL IC  +SA   E ++
Sbjct: 312 FYLTICTIMSAAAVEHIL 329


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,902
Number of Sequences: 336
Number of extensions: 1064
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 48
effective length of database: 106,457
effective search space used:  5109936
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)