Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00322
         (292 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic acetylch...    24   1.0  
AJ237664-1|CAB40379.2|   81|Anopheles gambiae putative infection...    23   2.3  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    23   3.1  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    22   4.1  

>AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 2 protein.
          Length = 569

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -2

Query: 213 LCFTVALSDFMIFLLIPTLIHYT 145
           LC ++ LS  M FLLI  +I  T
Sbjct: 286 LCISILLSQTMFFLLISEIIPST 308


>AJ237664-1|CAB40379.2|   81|Anopheles gambiae putative infection
           responsive shortpeptide protein.
          Length = 81

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -2

Query: 219 AVLCFTVALSDFMIFLLIPT 160
           AVL  T A++D M+F   PT
Sbjct: 9   AVLLCTAAVADAMVFAYAPT 28


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -3

Query: 140 NSYNLCHINS 111
           N+YNLCH+ S
Sbjct: 121 NNYNLCHMKS 130


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = -3

Query: 122 HINSKSVTIHLDGGFYLYICDELSAFTAEW 33
           H+   ++   LDG   L I  + +A+  EW
Sbjct: 97  HVMLDNLVAELDGHRPLVIAGDFNAWAVEW 126


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 257,305
Number of Sequences: 2352
Number of extensions: 3568
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 563,979
effective HSP length: 55
effective length of database: 434,619
effective search space used: 17819379
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)