Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00322
         (292 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB083621-1|BAB89334.1|  244|Homo sapiens putative G-protein coup...    29   2.7  
AB065922-1|BAC06137.1|  332|Homo sapiens seven transmembrane hel...    29   2.7  
X83973-1|CAA58807.1|  886|Homo sapiens transcription factor prot...    28   6.3  
BC104639-1|AAI04640.1|  229|Homo sapiens TTF1 protein protein.         28   6.3  
BC062692-1|AAH62692.1|  229|Homo sapiens TTF1 protein protein.         28   6.3  
BC050734-1|AAH50734.1|  338|Homo sapiens TTF1 protein protein.         28   6.3  
AL353701-3|CAI94997.2|  905|Homo sapiens transcription terminati...    28   6.3  

>AB083621-1|BAB89334.1|  244|Homo sapiens putative G-protein coupled
           receptor protein.
          Length = 244

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = -2

Query: 222 SAVLCFTVALSDFMIFLLIPTLIHY 148
           S V  F +AL+DFM+ L +P L++Y
Sbjct: 49  STVCFFHLALADFMLSLSLPILVYY 73


>AB065922-1|BAC06137.1|  332|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 332

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = -2

Query: 222 SAVLCFTVALSDFMIFLLIPTLIHY 148
           S V  F +AL+DFM+ L +P L++Y
Sbjct: 49  STVCFFHLALADFMLSLSLPILVYY 73


>X83973-1|CAA58807.1|  886|Homo sapiens transcription factor
           protein.
          Length = 886

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = +1

Query: 241 ICNVSTNCTSTLKKKKK 291
           IC+ + N TSTLKK+KK
Sbjct: 72  ICDETANATSTLKKRKK 88


>BC104639-1|AAI04640.1|  229|Homo sapiens TTF1 protein protein.
          Length = 229

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = +1

Query: 241 ICNVSTNCTSTLKKKKK 291
           IC+ + N TSTLKK+KK
Sbjct: 72  ICDETANATSTLKKRKK 88


>BC062692-1|AAH62692.1|  229|Homo sapiens TTF1 protein protein.
          Length = 229

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = +1

Query: 241 ICNVSTNCTSTLKKKKK 291
           IC+ + N TSTLKK+KK
Sbjct: 72  ICDETANATSTLKKRKK 88


>BC050734-1|AAH50734.1|  338|Homo sapiens TTF1 protein protein.
          Length = 338

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = +1

Query: 241 ICNVSTNCTSTLKKKKK 291
           IC+ + N TSTLKK+KK
Sbjct: 72  ICDETANATSTLKKRKK 88


>AL353701-3|CAI94997.2|  905|Homo sapiens transcription termination
           factor, RNA polymerase I protein.
          Length = 905

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = +1

Query: 241 ICNVSTNCTSTLKKKKK 291
           IC+ + N TSTLKK+KK
Sbjct: 72  ICDETANATSTLKKRKK 88


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,731,165
Number of Sequences: 237096
Number of extensions: 527309
Number of successful extensions: 565
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 554
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 565
length of database: 76,859,062
effective HSP length: 73
effective length of database: 59,551,054
effective search space used: 1369674242
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)