Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00322
         (292 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z74474-2|CAA98955.1|  425|Caenorhabditis elegans Hypothetical pr...    28   1.3  
AF106573-1|AAC78152.2|  336|Caenorhabditis elegans Hypothetical ...    26   3.9  
AC024836-1|AAK39347.2|  475|Caenorhabditis elegans Hypothetical ...    26   3.9  
AC024803-1|AAL05589.4|  433|Caenorhabditis elegans Hypothetical ...    25   6.8  

>Z74474-2|CAA98955.1|  425|Caenorhabditis elegans Hypothetical
           protein K10C8.2 protein.
          Length = 425

 Score = 27.9 bits (59), Expect = 1.3
 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
 Frame = -3

Query: 179 YFY*FQH*FTIHLNSYNLCHINSKSVTIHLDGGFYLYIC-DELSAFTAEWLVF 24
           Y + F + F I  NS N+C  + KS+  H    F+L +   +L    A   VF
Sbjct: 25  YLFPFVYLFGIISNSINICVFSQKSMRNHTVNWFFLALSFSDLLTLVASIFVF 77


>AF106573-1|AAC78152.2|  336|Caenorhabditis elegans Hypothetical
           protein F52D2.1 protein.
          Length = 336

 Score = 26.2 bits (55), Expect = 3.9
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -3

Query: 155 FTIHLNSYNLCHINSKSVTIHLDGGFYLYI 66
           F IH +S +   ++  S+T+ LD GF +YI
Sbjct: 72  FGIHFDSIHF-ELHDHSITLCLDNGFPIYI 100


>AC024836-1|AAK39347.2|  475|Caenorhabditis elegans Hypothetical
           protein Y59E1A.1 protein.
          Length = 475

 Score = 26.2 bits (55), Expect = 3.9
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -3

Query: 155 FTIHLNSYNLCHINSKSVTIHLDGGFYLYI 66
           F IH +S +   ++  S+T+ LD GF +YI
Sbjct: 72  FGIHFDSIHF-ELHDHSITLCLDNGFPIYI 100


>AC024803-1|AAL05589.4|  433|Caenorhabditis elegans Hypothetical
           protein Y51H7BM.1 protein.
          Length = 433

 Score = 25.4 bits (53), Expect = 6.8
 Identities = 10/31 (32%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = -3

Query: 92  LDGGFYLYICDELS-AFTAEWLVFHHGECRI 3
           LDG FY+Y+C E    + + W + +    +I
Sbjct: 44  LDGNFYVYLCCEKELGYPSNWSIEYKSTIQI 74


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,776,329
Number of Sequences: 27780
Number of extensions: 87261
Number of successful extensions: 198
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 198
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 280685548
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)