Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00321X
(549 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_04_0154 - 17749569-17749868 33 0.15
12_02_0286 - 16845594-16846223 32 0.26
12_01_0702 - 6006553-6007350,6010743-6011270 30 1.4
09_06_0081 + 20745627-20748144,20748211-20748308 30 1.4
01_06_1113 + 34613668-34614075,34614781-34614970,34615264-346153... 29 1.8
08_02_0588 + 19036509-19039235 29 3.2
06_01_1057 + 8441881-8442278,8442464-8442548,8442637-8442867 29 3.2
03_06_0772 - 36162537-36162745,36163131-36163171,36163316-361636... 29 3.2
09_01_0173 + 2495864-2496312,2497420-2497457,2497915-2498123,249... 28 4.3
08_02_1234 + 25437340-25437502,25437983-25438381,25441198-254416... 28 4.3
07_03_0937 - 22748970-22749302 28 4.3
01_02_0059 - 10701859-10701963,10702034-10702153,10702534-107026... 28 4.3
11_08_0016 + 27652728-27653011,27653105-27653198,27653277-276537... 28 5.6
09_01_0004 - 133130-133897 28 5.6
02_03_0337 + 17898732-17899370,17899516-17899977,17900058-179006... 28 5.6
12_02_1062 - 25763269-25764141 27 7.5
12_02_0287 - 16851369-16851998 27 7.5
09_04_0389 + 17239182-17239316,17240246-17240878 27 7.5
09_03_0196 + 13374054-13374456,13375145-13375707,13375935-133759... 27 7.5
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 27 7.5
06_01_1156 + 9788711-9788759,9788910-9789142,9790146-9791919,981... 27 7.5
01_05_0686 - 24277812-24277909,24278029-24278081,24278227-242783... 27 7.5
01_01_0722 + 5639760-5640101 27 7.5
03_01_0431 + 3324118-3324405,3324513-3324572,3325352-3326143 27 9.9
02_04_0508 - 23550785-23551219,23551717-23552670 27 9.9
>03_04_0154 - 17749569-17749868
Length = 99
Score = 33.1 bits (72), Expect = 0.15
Identities = 28/74 (37%), Positives = 30/74 (40%)
Frame = +3
Query: 117 GGCEETVRAQRGEDPGQVLSQGRAGRVSRWRQNISGGSGVDDAGPVTNRTCRREDGQLSV 296
GG V G GQV + G AG V RWRQ GG G AG V R R G+
Sbjct: 18 GGGNSAVEVGSG---GQVEAGGSAGAV-RWRQEAEGGGGA-GAGEVEGRGGERGRGRRRR 72
Query: 297 GRTVEHCERQCRRG 338
R E C G
Sbjct: 73 RRRAECGTCGCEGG 86
>12_02_0286 - 16845594-16846223
Length = 209
Score = 32.3 bits (70), Expect = 0.26
Identities = 24/79 (30%), Positives = 33/79 (41%)
Frame = +3
Query: 66 ARDPTSAKLKRDLS*SVGGCEETVRAQRGEDPGQVLSQGRAGRVSRWRQNISGGSGVDDA 245
A P A+ +R++ V G EE V +R G + + RAGR + GG G A
Sbjct: 112 AAQPEGARARREVRLEVAGTEERVGRRREGSSGGLRGKRRAGRGGGGGGDAGGGDGA--A 169
Query: 246 GPVTNRTCRREDGQLSVGR 302
G T + G GR
Sbjct: 170 GRRTGKAVGAAGGVQRHGR 188
>12_01_0702 - 6006553-6007350,6010743-6011270
Length = 441
Score = 29.9 bits (64), Expect = 1.4
Identities = 21/70 (30%), Positives = 31/70 (44%)
Frame = +3
Query: 66 ARDPTSAKLKRDLS*SVGGCEETVRAQRGEDPGQVLSQGRAGRVSRWRQNISGGSGVDDA 245
A P A+ +R++ V G EE +R G + + RAGR + GG+G A
Sbjct: 112 AAQPEGARARREVRLEVAGTEEREGRRRKGSSGGLRGKWRAGRGGGGGGDAGGGNGA--A 169
Query: 246 GPVTNRTCRR 275
G T + R
Sbjct: 170 GRRTGKAMPR 179
>09_06_0081 + 20745627-20748144,20748211-20748308
Length = 871
Score = 29.9 bits (64), Expect = 1.4
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = -3
Query: 328 HCRSQCSTVRPTDSCPSSRLHVRLVTGPASSTPEPP 221
H R+ C P + P+ HV + PA P PP
Sbjct: 176 HLRAPCGLAPPVPTPPALATHVPMPPAPAPPVPTPP 211
>01_06_1113 +
34613668-34614075,34614781-34614970,34615264-34615372,
34615822-34615912,34615948-34616076,34616306-34616804,
34617154-34617251
Length = 507
Score = 29.5 bits (63), Expect = 1.8
Identities = 17/51 (33%), Positives = 22/51 (43%)
Frame = +3
Query: 147 RGEDPGQVLSQGRAGRVSRWRQNISGGSGVDDAGPVTNRTCRREDGQLSVG 299
RG G+ +QGR G + WR S D P + + RR D S G
Sbjct: 185 RGRGRGRSFNQGRGGGNNNWRDAKSNFRSSDSPSPASGQ--RRNDSPASGG 233
>08_02_0588 + 19036509-19039235
Length = 908
Score = 28.7 bits (61), Expect = 3.2
Identities = 17/56 (30%), Positives = 21/56 (37%)
Frame = +3
Query: 135 VRAQRGEDPGQVLSQGRAGRVSRWRQNISGGSGVDDAGPVTNRTCRREDGQLSVGR 302
V A G G +GR G W + GG G + AG V T + GR
Sbjct: 83 VAAAGGRGEGGDRMRGRGGEEGTWTAHGGGGRGAERAGAVVAPTRTADAAGTGTGR 138
>06_01_1057 + 8441881-8442278,8442464-8442548,8442637-8442867
Length = 237
Score = 28.7 bits (61), Expect = 3.2
Identities = 25/74 (33%), Positives = 28/74 (37%)
Frame = +3
Query: 114 VGGCEETVRAQRGEDPGQVLSQGRAGRVSRWRQNISGGSGVDDAGPVTNRTCRREDGQLS 293
+GG R R PG + QGR GR R RQ G G G R DG
Sbjct: 1 MGGAAAPGRRGRRRQPGCQIRQGREGRRGRRRQT-DRGEGRCGCGRRREGKWPRPDGGCG 59
Query: 294 VGRTVEHCERQCRR 335
+ H R CRR
Sbjct: 60 L-----HLCRLCRR 68
>03_06_0772 -
36162537-36162745,36163131-36163171,36163316-36163600,
36163710-36163813,36163924-36164021,36165039-36165213,
36166429-36166578,36167113-36167193,36167246-36167299,
36167422-36167679
Length = 484
Score = 28.7 bits (61), Expect = 3.2
Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = -3
Query: 280 SSRLHVRLVTGPASSTPEPPDIFCRHLDTRPAR--PWDSTCPGSSPL*ARTVSSQPP 116
++ +H L PA STP PP R L RP P C SSP+ A TV+ P
Sbjct: 4 AAAVHRFLGVFPAPSTPTPPP---RQLSPRPHHIPPSLVRCCSSSPVCAATVAVAQP 57
>09_01_0173 +
2495864-2496312,2497420-2497457,2497915-2498123,
2498894-2499205
Length = 335
Score = 28.3 bits (60), Expect = 4.3
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = -3
Query: 232 PEPPDIFCRHLDTRPARPWDSTCPGSSPL*ARTVSSQPP 116
PE ++F +++D P + S+ ++ ART+S QPP
Sbjct: 252 PEKFELFGQNIDLTPLKGIFSSIENAASSVARTISGQPP 290
>08_02_1234 +
25437340-25437502,25437983-25438381,25441198-25441615,
25442353-25442542
Length = 389
Score = 28.3 bits (60), Expect = 4.3
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -2
Query: 311 LHRAAHRQLPVLPPARP 261
LHR +HR +P PP+RP
Sbjct: 8 LHRLSHRAIPSPPPSRP 24
>07_03_0937 - 22748970-22749302
Length = 110
Score = 28.3 bits (60), Expect = 4.3
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = -3
Query: 244 ASSTPEPPDIFCRHLDTRPARPW-DSTCPGSSPL*ARTVSSQPPTLQDKSRLSFALVG 74
A+ P P++ CRHL+ A S CPG + RT+ T +S+ A +G
Sbjct: 43 AARGPLRPEVLCRHLNRALAECLVTSCCPGETEA-VRTLCGSAGTALKRSQCQRARIG 99
>01_02_0059 -
10701859-10701963,10702034-10702153,10702534-10702609,
10702897-10703276
Length = 226
Score = 28.3 bits (60), Expect = 4.3
Identities = 20/58 (34%), Positives = 25/58 (43%)
Frame = -3
Query: 325 CRSQCSTVRPTDSCPSSRLHVRLVTGPASSTPEPPDIFCRHLDTRPARPWDSTCPGSS 152
CR + + P S SS + + + P P I CR L R ARP S P SS
Sbjct: 34 CRQAPARLPPPSSRASSPVELPRIV---PYRPAPSQIDCRRLVRRQARPPPSPPPSSS 88
>11_08_0016 +
27652728-27653011,27653105-27653198,27653277-27653738,
27653819-27654651,27654734-27654886,27654984-27655242,
27655653-27655691,27655708-27655791
Length = 735
Score = 27.9 bits (59), Expect = 5.6
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = -3
Query: 301 RPTD-SCPSSRLHVRLVTGPASSTPEPPD 218
RPT+ + P S+L + GPA S P PD
Sbjct: 375 RPTELTPPKSKLSIEASRGPALSVPHSPD 403
>09_01_0004 - 133130-133897
Length = 255
Score = 27.9 bits (59), Expect = 5.6
Identities = 23/79 (29%), Positives = 32/79 (40%)
Frame = +3
Query: 66 ARDPTSAKLKRDLS*SVGGCEETVRAQRGEDPGQVLSQGRAGRVSRWRQNISGGSGVDDA 245
A P A+ +R++ V G EE +R G ++ RAGR + GG G A
Sbjct: 154 AAQPEGARARREVRLEVAGKEEREGRRRERASGGHRAKRRAGRGGGGGGDAGGGDGA--A 211
Query: 246 GPVTNRTCRREDGQLSVGR 302
G T + G GR
Sbjct: 212 GRRTVEAAQAAGGGRQRGR 230
>02_03_0337 +
17898732-17899370,17899516-17899977,17900058-17900688,
17900819-17900888,17900971-17901141,17901221-17901479,
17901918-17901956,17902900-17902914
Length = 761
Score = 27.9 bits (59), Expect = 5.6
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = -3
Query: 301 RPTD-SCPSSRLHVRLVTGPASSTPEPPD 218
RPT+ + P S+L + GPA S P PD
Sbjct: 462 RPTELTPPKSKLSIEAPRGPALSVPHSPD 490
>12_02_1062 - 25763269-25764141
Length = 290
Score = 27.5 bits (58), Expect = 7.5
Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Frame = +3
Query: 123 CEETVRAQRGEDPGQVLSQGRAGRVSRWRQNISGGSGVDDAGP-VTNRTC 269
CE + + G+ V S A W N S G GVDD G N TC
Sbjct: 192 CENLLTSVYGDTREGVFSLEFAAAEMGWWVNGSCGGGVDDLGRCAANATC 241
>12_02_0287 - 16851369-16851998
Length = 209
Score = 27.5 bits (58), Expect = 7.5
Identities = 22/79 (27%), Positives = 31/79 (39%)
Frame = +3
Query: 66 ARDPTSAKLKRDLS*SVGGCEETVRAQRGEDPGQVLSQGRAGRVSRWRQNISGGSGVDDA 245
A P A+ +R++ V EE +R G + + RAGR + GG G A
Sbjct: 112 AAQPEGARARREVRLEVASTEEREGRRREGSSGGLRGKRRAGRGGGGGGDAGGGDGA--A 169
Query: 246 GPVTNRTCRREDGQLSVGR 302
G T + G GR
Sbjct: 170 GRRTGKAVGAAGGVQRHGR 188
>09_04_0389 + 17239182-17239316,17240246-17240878
Length = 255
Score = 27.5 bits (58), Expect = 7.5
Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 6/88 (6%)
Frame = -3
Query: 250 GPASSTPEPPDIFCRHLDTRPARPWDSTCPGSSPL*ARTVSSQPPTLQDK-SRLSFALVG 74
GP+S++ P F R P PW ++P A +S P L D+ L L+G
Sbjct: 104 GPSSTSSNKPASFRRWRRAEPRWPW-LCAADAAPQAALNHASPPMELVDRLQALGRVLLG 162
Query: 73 SRAGRRRCSWCRSRQT-----SSSPRRA 5
R R S +T +++PRR+
Sbjct: 163 RRQTRHLVEVLESAKTRVPVLTAAPRRS 190
>09_03_0196 +
13374054-13374456,13375145-13375707,13375935-13375976,
13376059-13376087,13376309-13376534,13376970-13377008,
13377126-13377155
Length = 443
Score = 27.5 bits (58), Expect = 7.5
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = -3
Query: 301 RPTD-SCPSSRLHVRLVTGPASSTPEPPD 218
RPT+ + P S+L + GPA S P PD
Sbjct: 229 RPTELTPPKSKLSIEAPRGPALSVPPSPD 257
>08_01_0003 +
30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 27.5 bits (58), Expect = 7.5
Identities = 23/73 (31%), Positives = 27/73 (36%), Gaps = 1/73 (1%)
Frame = +1
Query: 10 VGESWTSADFCTNYTCADLHGTLQVQSSNETCPEVSEAVKKQFVLKEE-KIPGKCCPKVE 186
VG+ WT A LH +S T + KK LKE GK K
Sbjct: 446 VGDDWTRRSGSLLSPLARLHSQGSEPASGSTQLSAVDTAKKVSSLKENFSRVGKPLAKPR 505
Query: 187 PVACRDGDKIYQE 225
ACR GD +E
Sbjct: 506 RRACRFGDDDEEE 518
>06_01_1156 +
9788711-9788759,9788910-9789142,9790146-9791919,
9819418-9819743
Length = 793
Score = 27.5 bits (58), Expect = 7.5
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = +3
Query: 156 DPGQVLSQGRAGRVSRWRQNISGGSGV--DDAGPVTNRTCRR 275
+ G + ++GR GR W N G GV D+A +R RR
Sbjct: 730 EAGSMRARGRRGRRRPWSVNREGDGGVEEDEAAVAASRRRRR 771
>01_05_0686 -
24277812-24277909,24278029-24278081,24278227-24278309,
24278353-24278401,24278466-24278514,24279455-24280418
Length = 431
Score = 27.5 bits (58), Expect = 7.5
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -3
Query: 352 GEYVQPRRHCRSQCSTVRPTDSCP 281
G Y Q RRH R TVRPT P
Sbjct: 164 GAYGQLRRHARENHPTVRPTQVDP 187
>01_01_0722 + 5639760-5640101
Length = 113
Score = 27.5 bits (58), Expect = 7.5
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +2
Query: 458 HVQLRPKRGGGVRDVSHEHCPDVSPATRP 544
H Q P+ GGG D S PD+S P
Sbjct: 65 HWQRDPRYGGGATDASAVFVPDISSPENP 93
>03_01_0431 + 3324118-3324405,3324513-3324572,3325352-3326143
Length = 379
Score = 27.1 bits (57), Expect = 9.9
Identities = 21/74 (28%), Positives = 31/74 (41%)
Frame = -3
Query: 493 NTSSPLRSQLNVVQLSAEDHLEPXSLSWSSTRQADCTQRPXQWSAAGGEYVQPRRHCRSQ 314
N SS +R QLN L ++L S +S Q P +W A +++ +RH
Sbjct: 85 NFSSFVR-QLNTYFLVRTNYLNKRSHFYSLRFQGFRKIDPDRWEFANDGFLRGQRHLLKM 143
Query: 313 CSTVRPTDSCPSSR 272
RP P S+
Sbjct: 144 IKRRRPLSYLPGSQ 157
>02_04_0508 - 23550785-23551219,23551717-23552670
Length = 462
Score = 27.1 bits (57), Expect = 9.9
Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = -3
Query: 322 RSQCSTVRPTDSCPSSRLHVRLVTGPASSTPEPP-DIFCRHLDTRPARPWDST 167
R+ R D P RL + V +S+P+ ++ C H +RPW T
Sbjct: 67 RTMADLARGLDDAPLMRLQLGGVPVVVASSPDAAREVTCTHDAAFASRPWPPT 119
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,295,193
Number of Sequences: 37544
Number of extensions: 337942
Number of successful extensions: 1519
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1466
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1517
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1233951264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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