Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00320
(650 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCPB1C11.03 |||cysteine transporter |Schizosaccharomyces pombe|... 34 0.020
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 33 0.047
SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomy... 31 0.11
SPBC24C6.08c |||vesicle coat protein|Schizosaccharomyces pombe|c... 31 0.14
SPCC2H8.02 |||inorganic phosphate transporter|Schizosaccharomyce... 29 0.58
SPBC1778.10c |ppk21|SPBC4C3.11|serine/threonine protein kinase P... 28 1.3
SPBC1271.10c |||membrane transporter|Schizosaccharomyces pombe|c... 27 1.8
SPBPB10D8.01 |||cysteine transporter |Schizosaccharomyces pombe|... 27 2.3
SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyc... 27 3.1
SPAC1399.02 |||membrane transporter|Schizosaccharomyces pombe|ch... 27 3.1
SPBC23E6.02 |||ATP-dependent DNA helicase |Schizosaccharomyces p... 26 5.4
SPBC685.09 |orc2|orp2|origin recognition complex subunit Orc2|Sc... 26 5.4
SPCC1223.11 |ptc2||protein phosphatase 2C Ptc2 |Schizosaccharomy... 25 9.5
SPBC2D10.09 |||3-hydroxyisobutyryl-CoA hydrolase|Schizosaccharom... 25 9.5
SPBC26H8.13c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 25 9.5
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 25 9.5
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 25 9.5
>SPCPB1C11.03 |||cysteine transporter |Schizosaccharomyces pombe|chr
3|||Manual
Length = 570
Score = 33.9 bits (74), Expect = 0.020
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +1
Query: 292 FYFGYAATQVPGGYLAEKYG-GKWTLGLGLLSTALFTFLTPFVTRLGGATWLFILRVLQG 468
FY GY Q PG Y+ + + GK+ +GL S ++ FL GG L LR G
Sbjct: 146 FYVGYIVGQFPGHYIMQTFPLGKF-VGLVTFSWSVIVFLHCCAYNYGG---LIALRFFLG 201
Query: 469 MGEGPTMPAL 498
E +PA+
Sbjct: 202 FTESCLLPAM 211
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 32.7 bits (71), Expect = 0.047
Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -1
Query: 374 PRPRVHLPPYFS-AKYPPGTCVAAYPK*NPPKIKP 273
P P +H PY S YPP C A Y NPP++ P
Sbjct: 200 PHP-IHNHPYSSPTSYPPPLCPATYCPSNPPQLAP 233
>SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 559
Score = 31.5 bits (68), Expect = 0.11
Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 5/78 (6%)
Frame = +1
Query: 274 GLILGGFYFGYAATQVPGGYLAEKYGGKWTLGLGLLSTALFTFLT-----PFVTRLGGAT 438
GL+ G Q+ G++ + +G K+ G ++ + T L T LG
Sbjct: 91 GLVNAAANIGNVFGQILFGFMGDFFGRKFVYGKEMIVVIIATVLVIALPKSIPTPLGKMM 150
Query: 439 WLFILRVLQGMGEGPTMP 492
W+F R L G+G G P
Sbjct: 151 WIFAWRWLLGLGIGGDYP 168
>SPBC24C6.08c |||vesicle coat protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 367
Score = 31.1 bits (67), Expect = 0.14
Identities = 22/87 (25%), Positives = 39/87 (44%), Gaps = 4/87 (4%)
Frame = -3
Query: 546 LGKNVRSEAPSALHYHKSWHCWTLSHSLQHSKNKQPRGTS*SSHERCQKCKKRCAQQPQA 367
LG +E PS + + H T+S +H +K+ G + + ++ + K + A
Sbjct: 7 LGHFCEAEGPSIIFCTQKLHRSTVSKFFEHPTSKRSIGVTENGNDSPEAFKNELDNRNNA 66
Query: 366 KSPF----TTVFFR*ISTRYLCRRISK 298
S T F+ S YLC+++SK
Sbjct: 67 DSQSLQSSTESLFKADSEDYLCKKVSK 93
>SPCC2H8.02 |||inorganic phosphate transporter|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 583
Score = 29.1 bits (62), Expect = 0.58
Identities = 20/79 (25%), Positives = 34/79 (43%), Gaps = 5/79 (6%)
Frame = +1
Query: 271 QGLILGGFYFGYAATQVPGGYLAEKYGGKWTLGLGLLSTALFTFLTPFV-----TRLGGA 435
+G++ G Q+ G+L + +G K+ G ++ + T L + T
Sbjct: 85 RGVVNAATNIGNIMGQLLFGFLGDFFGRKFVYGKEMMVVIIATILIICLPDRIPTPTAKM 144
Query: 436 TWLFILRVLQGMGEGPTMP 492
WLF RV+ G+G G P
Sbjct: 145 MWLFAFRVMLGIGIGGDYP 163
>SPBC1778.10c |ppk21|SPBC4C3.11|serine/threonine protein kinase
Ppk21|Schizosaccharomyces pombe|chr 2|||Manual
Length = 550
Score = 27.9 bits (59), Expect = 1.3
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -1
Query: 590 TEYIAYLSTTKHQSTLERTFVRRHPARYIIIRAGIVGPSPIP 465
T + Y S HQ ++R + + P+ II + V SPIP
Sbjct: 391 TAHYGYASLRSHQMPVDRLYYKLVPSSESIIESTSVFVSPIP 432
>SPBC1271.10c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 581
Score = 27.5 bits (58), Expect = 1.8
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +1
Query: 238 TVRHIYWNETTQGLILGGFYFGYAATQVPGGYLAEKYGG 354
T RH +W T GL GF +G A + YL + Y G
Sbjct: 447 TARHWHWGPTYVGLGFIGFGWG-CAGDISMAYLMDAYPG 484
>SPBPB10D8.01 |||cysteine transporter |Schizosaccharomyces pombe|chr
2|||Manual
Length = 552
Score = 27.1 bits (57), Expect = 2.3
Identities = 18/69 (26%), Positives = 30/69 (43%)
Frame = +1
Query: 292 FYFGYAATQVPGGYLAEKYGGKWTLGLGLLSTALFTFLTPFVTRLGGATWLFILRVLQGM 471
FY G+ Q+PG L +++ + STAL+T + + L LR G+
Sbjct: 133 FYVGFVIGQIPGHMLLQRFPVSKFVA---ASTALWTIIIFLHCAAYNFSGLMALRFFLGL 189
Query: 472 GEGPTMPAL 498
E +P +
Sbjct: 190 VESSLLPTM 198
>SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 340
Score = 26.6 bits (56), Expect = 3.1
Identities = 20/65 (30%), Positives = 31/65 (47%)
Frame = +1
Query: 16 FSHKASTIMLHHTPKIHSRSYGANGGL*CVHNEGLS*FSHYSDGK*NYNKRDACHRSIRM 195
F H A ++ P S SY A+GG+ + + ++ + D K NY + C +I
Sbjct: 47 FGHTAEVLVARFDP---SGSYFASGGM----DRQILLWNVFGDVK-NYGVLNGCKGAITD 98
Query: 196 LQWRR 210
LQW R
Sbjct: 99 LQWSR 103
>SPAC1399.02 |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 589
Score = 26.6 bits (56), Expect = 3.1
Identities = 18/60 (30%), Positives = 26/60 (43%)
Frame = +1
Query: 328 GYLAEKYGGKWTLGLGLLSTALFTFLTPFVTRLGGATWLFILRVLQGMGEGPTMPALMIM 507
G ++E G K L S LF F + WL + R +QG+G G M + I+
Sbjct: 146 GIMSEVVGRKIVL---YTSIVLFLFGSAMCGAAQNMLWLVLCRAVQGIGGGGIMSLVTIV 202
>SPBC23E6.02 |||ATP-dependent DNA helicase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1040
Score = 25.8 bits (54), Expect = 5.4
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = -3
Query: 507 HYHKSWHCWTLSHSLQHSKNKQPRGTS 427
H+H ++ + +H+L+ K Q +GTS
Sbjct: 256 HHHNNYKMFNTTHTLEDDKFLQGKGTS 282
>SPBC685.09 |orc2|orp2|origin recognition complex subunit
Orc2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 25.8 bits (54), Expect = 5.4
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +2
Query: 515 LGASERTFFPRCSGVWWCSNRQYIR 589
+G R+FF +CS + CSN R
Sbjct: 467 VGIEYRSFFQKCSAEFLCSNEPNFR 491
>SPCC1223.11 |ptc2||protein phosphatase 2C Ptc2 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 370
Score = 25.0 bits (52), Expect = 9.5
Identities = 11/32 (34%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +2
Query: 548 CSGVWWC-SNRQYIRFIYVRNIASKRSKLGLC 640
C G+W C S++Q + F+ R I +++S +C
Sbjct: 232 CDGIWDCKSSQQVVEFVR-RGIVARQSLEVIC 262
>SPBC2D10.09 |||3-hydroxyisobutyryl-CoA
hydrolase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 429
Score = 25.0 bits (52), Expect = 9.5
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -2
Query: 643 NT*AQFAPFASNIPDIYEPNILPI 572
NT +FA FAS+ P + P+++ +
Sbjct: 262 NTILEFAEFASSSPPTFTPDVMDV 285
>SPBC26H8.13c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 124
Score = 25.0 bits (52), Expect = 9.5
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = -1
Query: 506 IIIRAGIVGPSPIPCNTRRINSHVAPPNLVTNG 408
++I+ G +G +P P +R PN NG
Sbjct: 1 MVIKRGFIGNTPKPSRCKRTKPIFREPNSPVNG 33
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 25.0 bits (52), Expect = 9.5
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 423 IRRCHVAVYSSSVARNGRGSNNASSYDNVARW 518
IRR A+ ++V R GSN++S+ NVA +
Sbjct: 491 IRRHLEAMCGATVERKEGGSNSSSNISNVANF 522
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase
Tlh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1919
Score = 25.0 bits (52), Expect = 9.5
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 423 IRRCHVAVYSSSVARNGRGSNNASSYDNVARW 518
IRR A+ ++V R GSN++S+ NVA +
Sbjct: 491 IRRHLEAMCGATVERKEGGSNSSSNISNVANF 522
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,124,201
Number of Sequences: 5004
Number of extensions: 71915
Number of successful extensions: 201
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 201
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 293780908
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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