Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00320
(650 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_1227 + 9912646-9913056,9913306-9913413,9913517-9913672,991... 77 9e-15
09_06_0351 + 22466160-22466217,22466514-22467052,22467186-224672... 75 4e-14
01_06_1363 - 36681605-36681789,36681875-36681908,36682017-366821... 60 2e-09
09_06_0242 - 21806370-21806483,21806574-21806660,21806865-218069... 59 3e-09
05_05_0059 + 22011168-22011662,22012668-22012894,22013029-220133... 53 2e-07
11_01_0557 + 4394754-4396040 52 3e-07
04_01_0576 + 7466032-7466802,7468382-7468444,7469043-7469122,746... 34 0.11
04_04_1600 + 34704527-34704758,34705393-34706777 33 0.15
12_01_0510 + 4042321-4042411,4044653-4044723,4044985-4046106 30 1.8
04_04_1601 + 34707975-34708209,34708598-34709970 29 3.2
04_04_0466 + 25433678-25434007,25434118-25434176,25434345-254344... 29 4.2
09_06_0034 + 20370672-20371109,20371120-20371515 28 5.6
09_04_0529 + 18356964-18358307,18359829-18359944,18360036-183601... 28 5.6
07_01_0174 - 1227871-1228043,1228303-1228423,1228519-1228588,122... 28 5.6
12_02_0046 + 12830974-12832386 27 9.8
11_01_0561 - 4418452-4418658,4420168-4420509 27 9.8
08_01_0370 + 3275771-3275789,3275972-3276976,3277062-3277624 27 9.8
07_03_1633 - 28281825-28284005 27 9.8
01_07_0152 - 41525917-41526845,41527844-41527919 27 9.8
>01_01_1227 +
9912646-9913056,9913306-9913413,9913517-9913672,
9914110-9914325,9914436-9914645,9914722-9914859,
9915076-9915177,9915508-9915603
Length = 478
Score = 77.4 bits (182), Expect = 9e-15
Identities = 36/81 (44%), Positives = 49/81 (60%)
Frame = +1
Query: 256 WNETTQGLILGGFYFGYAATQVPGGYLAEKYGGKWTLGLGLLSTALFTFLTPFVTRLGGA 435
WN T GLI F++GY TQ+ GG A+ GGK LG G++ ++ T LTPF +L G
Sbjct: 153 WNPQTVGLIQSSFFWGYLLTQIAGGIWADTVGGKTVLGFGVIWWSIATALTPFAAKL-GL 211
Query: 436 TWLFILRVLQGMGEGPTMPAL 498
+L + R G+GEG MPA+
Sbjct: 212 PFLLVTRAFMGVGEGVAMPAM 232
Score = 38.7 bits (86), Expect = 0.004
Identities = 21/60 (35%), Positives = 33/60 (55%)
Frame = +3
Query: 471 GRGSNNASSYDNVARWVPPNERSFQGALVFGGAQIGNIFGSYMSGILLANGANWAYVFIS 650
G G + + +++WVP +ERS ALV+ G +G++ G S +L+ N W VF S
Sbjct: 224 GEGVAMPAMNNILSKWVPVSERSRSLALVYSGMYLGSVTGLAFSPLLIHN-FGWPSVFYS 282
>09_06_0351 +
22466160-22466217,22466514-22467052,22467186-22467293,
22467391-22467546,22467916-22468131,22468639-22468776,
22468880-22468981,22469089-22469146,22469346-22469408,
22469543-22469640
Length = 511
Score = 75.4 bits (177), Expect = 4e-14
Identities = 33/81 (40%), Positives = 51/81 (62%)
Frame = +1
Query: 256 WNETTQGLILGGFYFGYAATQVPGGYLAEKYGGKWTLGLGLLSTALFTFLTPFVTRLGGA 435
W+ T GLI F++GY TQ+ GG A+++GGK LG G++ ++ T LTP ++ G
Sbjct: 215 WSPATVGLIQSSFFWGYLLTQILGGIWADRFGGKVVLGFGVVWWSIATVLTPLAAKI-GL 273
Query: 436 TWLFILRVLQGMGEGPTMPAL 498
+L ++R G+GEG MPA+
Sbjct: 274 PFLLVMRAFMGIGEGVAMPAM 294
Score = 36.3 bits (80), Expect = 0.021
Identities = 19/58 (32%), Positives = 32/58 (55%)
Frame = +3
Query: 471 GRGSNNASSYDNVARWVPPNERSFQGALVFGGAQIGNIFGSYMSGILLANGANWAYVF 644
G G + + +++WVP +ERS ALV+ G +G++ G S +L++ W VF
Sbjct: 286 GEGVAMPAMNNILSKWVPVSERSRSLALVYSGMYLGSVTGLAFSPLLISR-FGWPSVF 342
>01_06_1363 -
36681605-36681789,36681875-36681908,36682017-36682154,
36682578-36682724,36682821-36682865,36683043-36683331,
36683443-36683669,36684109-36684528
Length = 494
Score = 59.7 bits (138), Expect = 2e-09
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Frame = +1
Query: 256 WNETTQGLILGGFYFGYAATQVPGGYLAEKYGGKWTLGLGLLSTALFTFLTPFVTRLGGA 435
W + G++ F +GY + + GG L + YGGK + G+ +L TFL+P+ +
Sbjct: 131 WTPSFAGVVQSSFLWGYLVSPIIGGALVDYYGGKRVMAYGVALWSLATFLSPWAA--ARS 188
Query: 436 TWLFI-LRVLQGMGEGPTMPAL 498
WLF+ RVL GM EG +P++
Sbjct: 189 LWLFLSTRVLLGMAEGVALPSM 210
Score = 32.7 bits (71), Expect = 0.26
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 507 VARWVPPNERSFQGALVFGGAQIGNIFGSYMSGILLA 617
V RW P ERS + G Q+GN G +S I+++
Sbjct: 214 VLRWFPRTERSSAVGIAMAGFQLGNTIGLLLSPIIMS 250
>09_06_0242 -
21806370-21806483,21806574-21806660,21806865-21806917,
21806999-21807140,21807406-21807501,21808617-21808785,
21808859-21808939,21809032-21809106,21810322-21810387,
21811013-21811158,21811898-21812344
Length = 491
Score = 58.8 bits (136), Expect = 3e-09
Identities = 25/58 (43%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = +1
Query: 247 HIY-WNETTQGLILGGFYFGYAATQVPGGYLAEKYGGKWTLGLGLLSTALFTFLTPFV 417
H Y WN +T GL+ F++GYA +Q+PGG+LA+ +GG+ L +G+++ +L T + P V
Sbjct: 161 HQYGWNSSTAGLVQSSFFWGYALSQLPGGWLAKLFGGRRVLEIGVVAWSLATAIIPAV 218
Score = 31.5 bits (68), Expect = 0.60
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +3
Query: 507 VARWVPPNERSFQGALVFGGAQIGNIFGSYMSGILLANGANWAYVF 644
VA +P ERS A+VFGG G++ G + ++ N W VF
Sbjct: 218 VAGSIPVQERSRAVAVVFGGLSFGSVLGLLFAPPIIQN-LGWESVF 262
>05_05_0059 +
22011168-22011662,22012668-22012894,22013029-22013377,
22013464-22013508,22013589-22013735,22013851-22013988,
22014126-22014159,22014258-22014430
Length = 535
Score = 53.2 bits (122), Expect = 2e-07
Identities = 26/81 (32%), Positives = 41/81 (50%)
Frame = +1
Query: 256 WNETTQGLILGGFYFGYAATQVPGGYLAEKYGGKWTLGLGLLSTALFTFLTPFVTRLGGA 435
W+ + G++ F +GY + + GG LA++YGGK + +L TFLTP+
Sbjct: 156 WSSSFLGIVQSSFLWGYVFSSMVGGALADRYGGKKVMAGAAALWSLATFLTPWAAS-QST 214
Query: 436 TWLFILRVLQGMGEGPTMPAL 498
L +R L G+ EG P +
Sbjct: 215 IMLLAIRALFGLAEGVAFPTM 235
>11_01_0557 + 4394754-4396040
Length = 428
Score = 52.4 bits (120), Expect = 3e-07
Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Frame = +1
Query: 259 NETTQGLILGGFYFGYAATQVPGGYLAEKYGGKWTLGLGLLSTALFTFLTPFVTRLGGAT 438
N+ +G+IL FY+GY +Q+PGG+ A++ GG+ L LLS L++ + V
Sbjct: 41 NQANKGMILSMFYYGYVLSQIPGGWAAQRLGGRLVL---LLSFVLWSSICAVVPLDPNRV 97
Query: 439 WLFIL-RVLQGMGEGPTMPAL 498
L +L R+L G+ +G P++
Sbjct: 98 ILLVLSRLLVGVAQGLIFPSI 118
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 507 VARWVPPNERSFQGALVFGGAQIGNIFGSYMSGILLAN 620
+A+WVPP ERS +L G +G G + L+ N
Sbjct: 122 LAQWVPPQERSRSVSLTTSGMYLGAACGMLLLPSLVKN 159
>04_01_0576 +
7466032-7466802,7468382-7468444,7469043-7469122,
7469505-7469622,7470035-7470067,7470400-7470474,
7470887-7471043,7471142-7471230,7472041-7472294,
7472977-7473148,7473250-7473333,7473626-7473730,
7474055-7474363,7474622-7474756,7476236-7476317,
7476423-7476502,7476622-7476783,7477071-7477138,
7478422-7478502,7478634-7478760,7478816-7478879,
7480808-7480854,7481042-7481335
Length = 1149
Score = 33.9 bits (74), Expect = 0.11
Identities = 20/58 (34%), Positives = 27/58 (46%)
Frame = -1
Query: 434 APPNLVTNGVRNVKSAVLNNPRPRVHLPPYFSAKYPPGTCVAAYPK*NPPKIKPCVVS 261
+P + GV +A+LNNP P Y+ +PP T + P PP PC VS
Sbjct: 21 SPNSAPPGGVPQSITALLNNPLPSASSSSYYWLTWPPPTPLPDAPP--PPPPHPCDVS 76
>04_04_1600 + 34704527-34704758,34705393-34706777
Length = 538
Score = 33.5 bits (73), Expect = 0.15
Identities = 22/79 (27%), Positives = 37/79 (46%)
Frame = +1
Query: 244 RHIYWNETTQGLILGGFYFGYAATQVPGGYLAEKYGGKWTLGLGLLSTALFTFLTPFVTR 423
R ++ NE Q +++G F + GG ++ G KWT+GL + +F +T
Sbjct: 91 RDLHINEVQQEVLVGCLSFISLLGSLAGGRTSDAVGRKWTIGLAAI---VFQAGAAVMTL 147
Query: 424 LGGATWLFILRVLQGMGEG 480
L + R+L G+G G
Sbjct: 148 APSFEVLMVGRLLAGVGIG 166
>12_01_0510 + 4042321-4042411,4044653-4044723,4044985-4046106
Length = 427
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/61 (27%), Positives = 31/61 (50%)
Frame = +1
Query: 316 QVPGGYLAEKYGGKWTLGLGLLSTALFTFLTPFVTRLGGATWLFILRVLQGMGEGPTMPA 495
++PGG+ A++ GG+ L L + +L L P + L + R+ G+ +G PA
Sbjct: 54 EIPGGWAAQRIGGRRVLLLSFVLWSLICGLIPLDPK--REVILVLSRLFVGVAQGFIFPA 111
Query: 496 L 498
+
Sbjct: 112 I 112
Score = 27.5 bits (58), Expect = 9.8
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 507 VARWVPPNERSFQGALVFGGAQIG 578
+A+WVPP ERS +L G +G
Sbjct: 116 LAQWVPPQERSRSVSLTTSGMYLG 139
>04_04_1601 + 34707975-34708209,34708598-34709970
Length = 535
Score = 29.1 bits (62), Expect = 3.2
Identities = 20/79 (25%), Positives = 37/79 (46%)
Frame = +1
Query: 244 RHIYWNETTQGLILGGFYFGYAATQVPGGYLAEKYGGKWTLGLGLLSTALFTFLTPFVTR 423
+ ++ +E Q +++G F + G ++ G KWT+G L+ A+F +T
Sbjct: 92 KDLHISEVQQEVLVGCLSFISLLGSLAAGRTSDAVGRKWTIG---LAAAVFQAGAAVMTL 148
Query: 424 LGGATWLFILRVLQGMGEG 480
L + R+L G+G G
Sbjct: 149 APSFAVLMMGRLLAGIGIG 167
>04_04_0466 +
25433678-25434007,25434118-25434176,25434345-25434426,
25435024-25435122,25435750-25435831,25436759-25436823,
25437241-25438308,25438369-25438446,25438550-25438596,
25438734-25438779,25438871-25438950,25439050-25439166,
25439842-25439923,25440156-25440281,25440415-25440489,
25440743-25440868,25441542-25441646
Length = 888
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 450 SSSVARNGRGSNNASSYDNVARWVPPNER 536
++SV+ GR ++ASSY ARW P R
Sbjct: 21 AASVSGRGRSPSSASSYRAAARWWPGARR 49
>09_06_0034 + 20370672-20371109,20371120-20371515
Length = 277
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/31 (38%), Positives = 15/31 (48%), Gaps = 4/31 (12%)
Frame = -3
Query: 570 EHHQTPEHLGKNVRSEAPSALH----YHKSW 490
+HH P H G S P+A H +H SW
Sbjct: 228 QHHPPPPHAGAGFTSSEPAADHQSFNFHSSW 258
>09_04_0529 +
18356964-18358307,18359829-18359944,18360036-18360133,
18360234-18360418
Length = 580
Score = 28.3 bits (60), Expect = 5.6
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 8/77 (10%)
Frame = +2
Query: 20 LTKRLRSCCIIPQR--YILGVMGLMGVC------NAYTMRVCLNLAITQMVNKTITNETH 175
L+ R CC+IP+ Y+ G GL N + + V A +++ +T T
Sbjct: 276 LSSRDVDCCLIPEEDFYLRGAGGLFDFLYRRIKDNGHAVVVVAEGAGQRLIPRTTTTSAS 335
Query: 176 AIDPYACSSGDVTGNET 226
AC+ D +GNET
Sbjct: 336 G----ACAGADESGNET 348
>07_01_0174 -
1227871-1228043,1228303-1228423,1228519-1228588,
1228877-1228953,1229215-1229393,1229558-1229684,
1229849-1229861,1230351-1230378,1230426-1230516,
1230870-1230956,1231239-1231276,1231426-1231464,
1231553-1231699,1231899-1231958,1232033-1232111,
1232429-1232517,1232906-1232967,1233238-1233427,
1233929-1234068,1235813-1236147,1237086-1237133
Length = 730
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 492 SSYDNVARWVPPNERSFQGALVFGG 566
SS+ W+PP++R +G LV GG
Sbjct: 60 SSFVGPLAWIPPSDRFPEGGLVSGG 84
>12_02_0046 + 12830974-12832386
Length = 470
Score = 27.5 bits (58), Expect = 9.8
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = -1
Query: 485 VGPSPIPCNTRRINSHVAPPNLVTNGVRNVKSAVLNNPRPRVHLPP 348
V P P P + R + VAPP V + ++ L P P V PP
Sbjct: 241 VAPQPAPPSLRTAPAAVAPPRQVP-VITQQQAPPLKRPAPPVPSPP 285
>11_01_0561 - 4418452-4418658,4420168-4420509
Length = 182
Score = 27.5 bits (58), Expect = 9.8
Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 6/61 (9%)
Frame = -1
Query: 488 IVGPSPIPCNTRRINSHVAPPNLVTNG------VRNVKSAVLNNPRPRVHLPPYFSAKYP 327
+VGP P+P T + PP +G + NV S V++ R R H PP P
Sbjct: 5 VVGPPPVPPPT----APPLPPERQLSGEFVDVELGNVSSTVVDVDRLRAHAPPVPPPSAP 60
Query: 326 P 324
P
Sbjct: 61 P 61
>08_01_0370 + 3275771-3275789,3275972-3276976,3277062-3277624
Length = 528
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/48 (27%), Positives = 21/48 (43%)
Frame = +3
Query: 507 VARWVPPNERSFQGALVFGGAQIGNIFGSYMSGILLANGANWAYVFIS 650
V W ++R + +GNI GS ++ LL G W++ S
Sbjct: 202 VGNWFGKSKRGLIMGIWNAHTSVGNISGSLLAAFLLKFGWGWSFAIPS 249
>07_03_1633 - 28281825-28284005
Length = 726
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 453 SSVARNGRGSNNASSYDNVARWVPPNERSFQGAL 554
S A+NGR ++ + ++AR + PNE +F L
Sbjct: 404 SGYAQNGRCNDALELFSSMARCLTPNETTFASVL 437
>01_07_0152 - 41525917-41526845,41527844-41527919
Length = 334
Score = 27.5 bits (58), Expect = 9.8
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +3
Query: 480 SNNASSYDNVARWVPPNERSFQGALVFGGAQIGN-IFGSYMSGILLA 617
SN A+S N A WV N R + A+ +GN + G S IL A
Sbjct: 88 SNLAASSSNAAAWVRDNVRPYYPAVNIKYIAVGNEVEGGATSSILPA 134
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,737,818
Number of Sequences: 37544
Number of extensions: 501828
Number of successful extensions: 1448
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1376
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1444
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -