Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00320
(650 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_37350| Best HMM Match : MFS_1 (HMM E-Value=4.9e-07) 88 7e-18
SB_12290| Best HMM Match : MFS_1 (HMM E-Value=9.6e-16) 69 3e-12
SB_31394| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 9e-11
SB_24826| Best HMM Match : MFS_1 (HMM E-Value=1.1e-26) 59 4e-09
SB_16303| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 2e-08
SB_51537| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 3e-08
SB_17852| Best HMM Match : MFS_1 (HMM E-Value=0.00068) 55 4e-08
SB_43984| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_36205| Best HMM Match : ADH_zinc_N (HMM E-Value=0.00092) 41 0.001
SB_53973| Best HMM Match : TP2 (HMM E-Value=8.2) 38 0.007
SB_40774| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_39460| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_32467| Best HMM Match : MFS_1 (HMM E-Value=0.41) 38 0.009
SB_25727| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.087
SB_33453| Best HMM Match : BRF1 (HMM E-Value=1.4) 31 0.62
SB_33520| Best HMM Match : 7tm_1 (HMM E-Value=7.3e-09) 30 1.9
SB_31799| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_17098| Best HMM Match : WD40 (HMM E-Value=8.9e-32) 28 7.6
SB_57295| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_30045| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_18704| Best HMM Match : MFS_1 (HMM E-Value=0.034) 28 7.6
>SB_37350| Best HMM Match : MFS_1 (HMM E-Value=4.9e-07)
Length = 349
Score = 87.8 bits (208), Expect = 7e-18
Identities = 41/84 (48%), Positives = 55/84 (65%)
Frame = +1
Query: 256 WNETTQGLILGGFYFGYAATQVPGGYLAEKYGGKWTLGLGLLSTALFTFLTPFVTRLGGA 435
W++ TQGL+LG F++GY TQ+PGG+LA YGGK GLG+ TA+FT LTP R A
Sbjct: 101 WDQDTQGLVLGAFFYGYLVTQLPGGWLAGHYGGKSVFGLGVFFTAIFTLLTPIAARTHVA 160
Query: 436 TWLFILRVLQGMGEGPTMPALMIM 507
L +R++ G GE +P L I+
Sbjct: 161 L-LVAVRLMAGFGEKVPVPWLKIL 183
Score = 31.5 bits (68), Expect = 0.62
Identities = 24/73 (32%), Positives = 30/73 (41%)
Frame = +2
Query: 8 KDNFLTKRLRSCCIIPQRYILGVMGLMGVCNAYTMRVCLNLAITQMVNKTITNETHAIDP 187
K L RL CC R +L +M G Y MR L++A+ MVN+T N
Sbjct: 22 KPKSLCNRL-FCC----RNVLVLMQFAGFVTVYGMRANLSVALVAMVNQTYANSASGTRV 76
Query: 188 YACSSGDVTGNET 226
Y GN T
Sbjct: 77 YVPECRLDGGNHT 89
>SB_12290| Best HMM Match : MFS_1 (HMM E-Value=9.6e-16)
Length = 432
Score = 68.9 bits (161), Expect = 3e-12
Identities = 33/80 (41%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Frame = +1
Query: 256 WNETTQGLILGGFYFGYAATQVPGGYLAEKYGGKWTLGLGLLSTALFTFLTPFVTRLGGA 435
W+ QGL+LG F++GY Q+PG +LA + GG G G+ T+L LTP TR +
Sbjct: 163 WDSALQGLVLGSFFYGYWVLQIPGAWLAMRIGGTRVFGYGVFVTSLLALLTPVATRY--S 220
Query: 436 TW-LFILRVLQGMGEGPTMP 492
W L +R+ QG+ G T P
Sbjct: 221 VWGLVGVRIFQGLFLGVTFP 240
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/34 (55%), Positives = 24/34 (70%)
Frame = +2
Query: 50 IPQRYILGVMGLMGVCNAYTMRVCLNLAITQMVN 151
IP+RY+L M +G N Y+MRV LN+AI MVN
Sbjct: 111 IPKRYVLLAMTWLGFINIYSMRVNLNVAIVGMVN 144
Score = 31.1 bits (67), Expect = 0.81
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = +3
Query: 510 ARWVPPNERSFQGALVFGGAQIGNIFGSYMSGILLANG--ANWAYVF 644
++W PP ERS + G GNI ++G+L G W VF
Sbjct: 247 SKWAPPFERSTLITISIAGCPFGNIVAIPLTGLLSKYGFDGGWPSVF 293
>SB_31394| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 67
Score = 64.1 bits (149), Expect = 9e-11
Identities = 30/65 (46%), Positives = 38/65 (58%)
Frame = +1
Query: 277 LILGGFYFGYAATQVPGGYLAEKYGGKWTLGLGLLSTALFTFLTPFVTRLGGATWLFILR 456
+ILG FY+GY Q+PGG+LA K GG G G+ S + T TP R L ILR
Sbjct: 2 IILGSFYYGYMVFQIPGGWLAMKLGGAKLFGFGIFSASFLTLFTPLAARCSPIA-LIILR 60
Query: 457 VLQGM 471
VL+G+
Sbjct: 61 VLEGL 65
>SB_24826| Best HMM Match : MFS_1 (HMM E-Value=1.1e-26)
Length = 473
Score = 58.8 bits (136), Expect = 4e-09
Identities = 29/67 (43%), Positives = 40/67 (59%)
Frame = +1
Query: 271 QGLILGGFYFGYAATQVPGGYLAEKYGGKWTLGLGLLSTALFTFLTPFVTRLGGATWLFI 450
+G++LG FY+GY A Q+ GG+LA K G G +L +L T LTP R G L
Sbjct: 65 EGVVLGSFYYGYVALQLLGGWLAIKIGATRLYGAAILVASLLTLLTPLAAR-GSPYLLVA 123
Query: 451 LRVLQGM 471
LR+L+G+
Sbjct: 124 LRMLEGL 130
Score = 33.1 bits (72), Expect = 0.20
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +2
Query: 47 IIPQRYILGVMGLMGVCNAYTMRVCLNLAITQMV 148
+IP+RYIL + G Y +RV LN+AI MV
Sbjct: 10 LIPKRYILACLIFWGFFTMYALRVNLNVAIGAMV 43
>SB_16303| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 249
Score = 56.4 bits (130), Expect = 2e-08
Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 8/93 (8%)
Frame = +1
Query: 244 RHIYWNETTQGLILGGFYFGYAATQVPGGYLAEKYGGKWTLGLGLLSTALFTFLTPFVTR 423
+ + W++ G ++ F++GY Q+ GGYL++KYGG+ LG + + T PF
Sbjct: 52 KDLAWDKEADGAVMSAFFWGYTPAQIVGGYLSDKYGGEVVLGYAAIIWSFCTLAVPF--- 108
Query: 424 LGGATWLF--------ILRVLQGMGEGPTMPAL 498
L G +LF + RV+ G+ +G P+L
Sbjct: 109 LPGKAFLFFPPIVMVILSRVVTGLSQGLHYPSL 141
>SB_51537| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 256
Score = 55.6 bits (128), Expect = 3e-08
Identities = 25/68 (36%), Positives = 39/68 (57%)
Frame = +1
Query: 277 LILGGFYFGYAATQVPGGYLAEKYGGKWTLGLGLLSTALFTFLTPFVTRLGGATWLFILR 456
L+LG FY+GYA Q+P G+ K GGK G G+L ++ +TP + + ++ LR
Sbjct: 2 LVLGSFYYGYAVLQIPAGWAVLKIGGKPIFGFGILVASVLALVTPPIVKQSFIVFI-CLR 60
Query: 457 VLQGMGEG 480
+ QG+ G
Sbjct: 61 IAQGLSLG 68
>SB_17852| Best HMM Match : MFS_1 (HMM E-Value=0.00068)
Length = 256
Score = 55.2 bits (127), Expect = 4e-08
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Frame = +1
Query: 256 WNETTQGLILGGFYFGYAATQVPGGYLAEKYGGKWTLGLGLLSTALFTFLTPFVTR---L 426
WN+ GL+L F++GY TQ+PGG+L++ YG + L + +L T + P V
Sbjct: 68 WNKRESGLVLSSFFWGYLITQIPGGFLSDVYGAERLLLWAVTGCSLSTLVIPLVASQKVT 127
Query: 427 GGATWLFILRVLQGMGEGPTMPAL 498
T + I R+ G+ +G P+L
Sbjct: 128 SPITLVLISRLALGVFQGIYYPSL 151
>SB_43984| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/37 (48%), Positives = 27/37 (72%)
Frame = +1
Query: 313 TQVPGGYLAEKYGGKWTLGLGLLSTALFTFLTPFVTR 423
TQVPGG LA+++GG+ LG +L +++F FL+P R
Sbjct: 3 TQVPGGMLAQRFGGRVVLGSCMLFSSIFVFLSPVAAR 39
>SB_36205| Best HMM Match : ADH_zinc_N (HMM E-Value=0.00092)
Length = 676
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = +2
Query: 53 PQRYILGVMGLMGVCNAYTMRVCLNLAITQMVNKTITN 166
P+RY+L +M +G N Y +RV LN+A+ MVN N
Sbjct: 324 PKRYVLAIMTFLGFMNMYALRVNLNVALGAMVNNHTVN 361
>SB_53973| Best HMM Match : TP2 (HMM E-Value=8.2)
Length = 185
Score = 37.9 bits (84), Expect = 0.007
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +2
Query: 53 PQRYILGVMGLMGVCNAYTMRVCLNLAITQMVN-KTITNETHAI 181
P+RYI+ +M +G+C Y +RV L++AI M N T+T I
Sbjct: 33 PKRYIVAIMVFLGICVQYALRVNLSVAIGAMCNPHTVTENGFTI 76
>SB_40774| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 184
Score = 37.9 bits (84), Expect = 0.007
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +2
Query: 53 PQRYILGVMGLMGVCNAYTMRVCLNLAITQMVN-KTITNETHAI 181
P+RYI+ +M +G+C Y +RV L++AI M N T+T I
Sbjct: 33 PKRYIVAIMVFLGICVQYALRVNLSVAIGAMCNPHTVTENGFTI 76
>SB_39460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 78
Score = 37.9 bits (84), Expect = 0.007
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +2
Query: 53 PQRYILGVMGLMGVCNAYTMRVCLNLAITQMVN-KTITNETHAI 181
P+RYI+ +M +G+C Y +RV L++AI M N T+T I
Sbjct: 33 PKRYIVAIMVFLGICVQYALRVNLSVAIGAMCNPHTVTENGFTI 76
>SB_32467| Best HMM Match : MFS_1 (HMM E-Value=0.41)
Length = 366
Score = 37.5 bits (83), Expect = 0.009
Identities = 15/33 (45%), Positives = 24/33 (72%)
Frame = +2
Query: 53 PQRYILGVMGLMGVCNAYTMRVCLNLAITQMVN 151
P+RY++ V+ L+G N Y MRV L++A+ MV+
Sbjct: 51 PKRYLVAVLALLGFANVYGMRVNLSVALVAMVS 83
>SB_25727| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1758
Score = 34.3 bits (75), Expect = 0.087
Identities = 21/60 (35%), Positives = 29/60 (48%)
Frame = +1
Query: 301 GYAATQVPGGYLAEKYGGKWTLGLGLLSTALFTFLTPFVTRLGGATWLFILRVLQGMGEG 480
GY V GG+L +K G +GL L ALF+ + P V + G L + L +G G
Sbjct: 1078 GYLIGSVAGGWLYDKLDGYLVIGLVSLLGALFSIVMPLVGNIYG---LIFVACLASIGNG 1134
>SB_33453| Best HMM Match : BRF1 (HMM E-Value=1.4)
Length = 412
Score = 31.5 bits (68), Expect = 0.62
Identities = 22/69 (31%), Positives = 33/69 (47%)
Frame = -3
Query: 594 MNRIYCLFEHHQTPEHLGKNVRSEAPSALHYHKSWHCWTLSHSLQHSKNKQPRGTS*SSH 415
+ R +C + E G+ + +EA A H H SHS +H ++K T SSH
Sbjct: 108 VRRCFCRYAP-PLAEQEGQLIETEATGAPQKHH--HTLNQSHS-KHKRSKSSSETDPSSH 163
Query: 414 ERCQKCKKR 388
+ QK KK+
Sbjct: 164 SKRQKHKKK 172
>SB_33520| Best HMM Match : 7tm_1 (HMM E-Value=7.3e-09)
Length = 317
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +1
Query: 235 KTVRHIYWNETTQGLILGGFYFGYAATQVPGGYLAEKYGGKWTLGLGL-LSTALFTFLTP 411
K ++ N T L++G FG A + G L EKY W++ G+ + +LF+F
Sbjct: 45 KKSSYLLVNLTVADLMVGLTLFGLALCSLAGPTLLEKYRYIWSVANGISVDGSLFSFTVI 104
Query: 412 FVTR 423
+ R
Sbjct: 105 AIER 108
>SB_31799| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 960
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = -2
Query: 376 TPGQESIYHRIFPLNIHQVPVSPHIQS--KIH-LKLSPALFRSN 254
TPG + F +++H++P IQ KIH L +P+ RSN
Sbjct: 801 TPGTQKFRRFSFLISVHRLPTRNKIQQGRKIHALANTPSTLRSN 844
>SB_17098| Best HMM Match : WD40 (HMM E-Value=8.9e-32)
Length = 808
Score = 27.9 bits (59), Expect = 7.6
Identities = 22/71 (30%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Frame = -2
Query: 361 SIYHRIFPLNIHQVPVSPHIQSKIHLKLSPALFR--SNKYGVRFWNLSFISSNVATGACV 188
S+YH + V V P + H L P F S VR WN+ S NV +
Sbjct: 296 SLYHSAC---VWGVEVYPEVSDNKHAALPPGTFLTCSADDTVRVWNVVEASKNVNDVSSD 352
Query: 187 WIDGMRLVCYS 155
G+R +C S
Sbjct: 353 GRTGVRTICAS 363
>SB_57295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1320
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = -2
Query: 394 KALCSTTPGQESI---YHRIFPLNIHQVPVSPHIQSKIH 287
K C +P SI Y RIFP +H VSP + +H
Sbjct: 506 KVYCYISPRNVSIKEFYMRIFPHKLHAFRVSPRTKFTLH 544
>SB_30045| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 454
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +2
Query: 206 DVTGNETEIPKPYAIFIGTKQRRA*F*VDFTLDMRRHRYL 325
D + T+ P PY + +G ++RR + LD + H++L
Sbjct: 143 DTSDKGTQTPSPYRLRVGVQRRRPYQPMLLNLDAQVHKFL 182
>SB_18704| Best HMM Match : MFS_1 (HMM E-Value=0.034)
Length = 363
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 507 VARWVPPNERSFQGALVFGGAQIGNIFGSYMSG 605
V+ W ERS+ ALV +G +FGS++SG
Sbjct: 135 VSEWNLLCERSYISALVQSMYFVGYLFGSFLSG 167
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,558,284
Number of Sequences: 59808
Number of extensions: 557193
Number of successful extensions: 1415
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1310
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1414
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1657237625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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