Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00320
(650 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g00370.1 68417.m00051 sugar transporter family protein contai... 77 8e-15
At2g29650.3 68415.m03602 inorganic phosphate transporter, putati... 77 1e-14
At2g29650.2 68415.m03604 inorganic phosphate transporter, putati... 77 1e-14
At2g29650.1 68415.m03603 inorganic phosphate transporter, putati... 77 1e-14
At5g20380.1 68418.m02424 transporter-related low similarity to v... 60 9e-10
At3g46980.2 68416.m05102 transporter-related low similarity to b... 57 9e-09
At3g46980.1 68416.m05101 transporter-related low similarity to b... 57 9e-09
At5g44370.1 68418.m05433 transporter-related similar to vesicula... 56 3e-08
At2g38060.1 68415.m04672 transporter-related low similarity to v... 54 1e-07
At3g13050.1 68416.m01626 transporter-related low similarity to a... 33 0.22
At5g38560.1 68418.m04662 protein kinase family protein contains ... 32 0.38
At5g13740.1 68418.m01599 sugar transporter family protein contai... 31 0.50
At5g59590.1 68418.m07467 UDP-glucoronosyl/UDP-glucosyl transfera... 29 2.7
At5g18230.1 68418.m02139 transcription regulator NOT2/NOT3/NOT5 ... 29 2.7
At2g16130.1 68415.m01849 mannitol transporter, putative similar ... 28 4.7
At5g54250.2 68418.m06758 cyclic nucleotide-regulated ion channel... 28 6.2
At5g54250.1 68418.m06757 cyclic nucleotide-regulated ion channel... 28 6.2
At5g23870.3 68418.m02803 pectinacetylesterase family protein con... 27 8.2
At5g23870.2 68418.m02802 pectinacetylesterase family protein con... 27 8.2
At5g23870.1 68418.m02804 pectinacetylesterase family protein con... 27 8.2
At4g36670.1 68417.m05203 mannitol transporter, putative similar ... 27 8.2
>At4g00370.1 68417.m00051 sugar transporter family protein contains
Pfam profile PF00083: major facilitator superfamily
protein
Length = 541
Score = 77.4 bits (182), Expect = 8e-15
Identities = 35/81 (43%), Positives = 50/81 (61%)
Frame = +1
Query: 256 WNETTQGLILGGFYFGYAATQVPGGYLAEKYGGKWTLGLGLLSTALFTFLTPFVTRLGGA 435
W+ T GLI F++GY TQ+ GG A+K+GGK LG G++ + T +TP RL G
Sbjct: 165 WSSATVGLIQSSFFWGYLLTQILGGIWADKFGGKVVLGFGVVWWSFATIMTPIAARL-GL 223
Query: 436 TWLFILRVLQGMGEGPTMPAL 498
+L ++R G+GEG MPA+
Sbjct: 224 PFLLVVRAFMGIGEGVAMPAM 244
Score = 36.7 bits (81), Expect = 0.013
Identities = 19/60 (31%), Positives = 32/60 (53%)
Frame = +3
Query: 471 GRGSNNASSYDNVARWVPPNERSFQGALVFGGAQIGNIFGSYMSGILLANGANWAYVFIS 650
G G + + +++W+P +ERS ALV+ G +G++ G S +L+ W VF S
Sbjct: 236 GEGVAMPAMNNMLSKWIPVSERSRSLALVYSGMYLGSVTGLAFSPMLITK-FGWPSVFYS 294
>At2g29650.3 68415.m03602 inorganic phosphate transporter, putative
similar to brain specific Na+-dependent inorganic
phosphate cotransporter [Rattus norvegicus] GI:507415;
contains Pfam profile PF00083: major facilitator
superfamily protein
Length = 400
Score = 76.6 bits (180), Expect = 1e-14
Identities = 35/81 (43%), Positives = 49/81 (60%)
Frame = +1
Query: 256 WNETTQGLILGGFYFGYAATQVPGGYLAEKYGGKWTLGLGLLSTALFTFLTPFVTRLGGA 435
WN T GLI F++GY TQ+ GG A+ GGK LG G++ ++ T LTP +L G
Sbjct: 24 WNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKRVLGFGVIWWSIATILTPVAAKL-GL 82
Query: 436 TWLFILRVLQGMGEGPTMPAL 498
+L ++R G+GEG MPA+
Sbjct: 83 PYLLVVRAFMGVGEGVAMPAM 103
Score = 35.5 bits (78), Expect = 0.031
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = +3
Query: 471 GRGSNNASSYDNVARWVPPNERSFQGALVFGGAQIGNIFGSYMSGILLANGANWAYVFIS 650
G G + + +++WVP ERS ALV+ G +G++ G S L+ + W VF S
Sbjct: 95 GEGVAMPAMNNILSKWVPVQERSRSLALVYSGMYLGSVTGLAFSPFLI-HQFGWPSVFYS 153
>At2g29650.2 68415.m03604 inorganic phosphate transporter, putative
similar to brain specific Na+-dependent inorganic
phosphate cotransporter [Rattus norvegicus] GI:507415;
contains Pfam profile PF00083: major facilitator
superfamily protein
Length = 398
Score = 76.6 bits (180), Expect = 1e-14
Identities = 35/81 (43%), Positives = 49/81 (60%)
Frame = +1
Query: 256 WNETTQGLILGGFYFGYAATQVPGGYLAEKYGGKWTLGLGLLSTALFTFLTPFVTRLGGA 435
WN T GLI F++GY TQ+ GG A+ GGK LG G++ ++ T LTP +L G
Sbjct: 136 WNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKRVLGFGVIWWSIATILTPVAAKL-GL 194
Query: 436 TWLFILRVLQGMGEGPTMPAL 498
+L ++R G+GEG MPA+
Sbjct: 195 PYLLVVRAFMGVGEGVAMPAM 215
Score = 35.5 bits (78), Expect = 0.031
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = +3
Query: 471 GRGSNNASSYDNVARWVPPNERSFQGALVFGGAQIGNIFGSYMSGILLANGANWAYVFIS 650
G G + + +++WVP ERS ALV+ G +G++ G S L+ + W VF S
Sbjct: 207 GEGVAMPAMNNILSKWVPVQERSRSLALVYSGMYLGSVTGLAFSPFLI-HQFGWPSVFYS 265
>At2g29650.1 68415.m03603 inorganic phosphate transporter, putative
similar to brain specific Na+-dependent inorganic
phosphate cotransporter [Rattus norvegicus] GI:507415;
contains Pfam profile PF00083: major facilitator
superfamily protein
Length = 512
Score = 76.6 bits (180), Expect = 1e-14
Identities = 35/81 (43%), Positives = 49/81 (60%)
Frame = +1
Query: 256 WNETTQGLILGGFYFGYAATQVPGGYLAEKYGGKWTLGLGLLSTALFTFLTPFVTRLGGA 435
WN T GLI F++GY TQ+ GG A+ GGK LG G++ ++ T LTP +L G
Sbjct: 136 WNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKRVLGFGVIWWSIATILTPVAAKL-GL 194
Query: 436 TWLFILRVLQGMGEGPTMPAL 498
+L ++R G+GEG MPA+
Sbjct: 195 PYLLVVRAFMGVGEGVAMPAM 215
Score = 35.5 bits (78), Expect = 0.031
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = +3
Query: 471 GRGSNNASSYDNVARWVPPNERSFQGALVFGGAQIGNIFGSYMSGILLANGANWAYVFIS 650
G G + + +++WVP ERS ALV+ G +G++ G S L+ + W VF S
Sbjct: 207 GEGVAMPAMNNILSKWVPVQERSRSLALVYSGMYLGSVTGLAFSPFLI-HQFGWPSVFYS 265
>At5g20380.1 68418.m02424 transporter-related low similarity to
vesicular glutamate transporter 3 [Rattus norvegicus]
GI:21685382
Length = 517
Score = 60.5 bits (140), Expect = 9e-10
Identities = 27/75 (36%), Positives = 46/75 (61%)
Frame = +1
Query: 256 WNETTQGLILGGFYFGYAATQVPGGYLAEKYGGKWTLGLGLLSTALFTFLTPFVTRLGGA 435
W+ + GL+ F++GYA +Q+PGG+L++ +GG+ L +G+ + + T L P + G
Sbjct: 132 WSSSVAGLVQSSFFWGYALSQLPGGWLSKIFGGRKVLEIGVFTWSFATALVPLLA--GFM 189
Query: 436 TWLFILRVLQGMGEG 480
L R+L G+GEG
Sbjct: 190 PGLIFSRILVGIGEG 204
Score = 39.9 bits (89), Expect = 0.001
Identities = 20/67 (29%), Positives = 36/67 (53%)
Frame = +3
Query: 444 VYSSSVARNGRGSNNASSYDNVARWVPPNERSFQGALVFGGAQIGNIFGSYMSGILLANG 623
++S + G G + +++ D +AR +P ERS VFGG +G++ G ++ ++
Sbjct: 193 IFSRILVGIGEGVSPSAATDLIARTIPVKERSRAVGFVFGGLSLGSVMGLLLAPPIIET- 251
Query: 624 ANWAYVF 644
NW VF
Sbjct: 252 FNWESVF 258
>At3g46980.2 68416.m05102 transporter-related low similarity to
brain specific Na+-dependent inorganic phosphate
cotransporter from [Rattus norvegicus] GI:507415, [Homo
sapiens] GI:7328925, vesicular glutamate transporter 3
from [Rattus norvegicus] GI:21685382; contains Pfam
profile PF00083: major facilitator superfamily protein
Length = 469
Score = 57.2 bits (132), Expect = 9e-09
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Frame = +1
Query: 256 WNETTQGLILGGFYFGYAATQVPGGYLAEKYGGKWTLGLGLLSTALFTFLTPFVTRLGGA 435
W+++ G++ F +GY + + GG L ++YGGK + G+ +L TFLTP+ +
Sbjct: 145 WSKSFSGIVQSSFLWGYLISPIAGGTLVDRYGGKVVMAWGVALWSLATFLTPWAA--DSS 202
Query: 436 TW-LFILRVLQGMGEGPTMPAL 498
W L R + G+ EG +P +
Sbjct: 203 LWALLAARAMVGVAEGVALPCM 224
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +3
Query: 507 VARWVPPNERSFQGALVFGGAQIGNIFGSYMSGILLANG 623
VARW PP ERS + G Q+GN+ G +S IL++ G
Sbjct: 228 VARWFPPTERSRAVGIAMAGFQLGNVVGLMLSPILMSQG 266
>At3g46980.1 68416.m05101 transporter-related low similarity to
brain specific Na+-dependent inorganic phosphate
cotransporter from [Rattus norvegicus] GI:507415, [Homo
sapiens] GI:7328925, vesicular glutamate transporter 3
from [Rattus norvegicus] GI:21685382; contains Pfam
profile PF00083: major facilitator superfamily protein
Length = 533
Score = 57.2 bits (132), Expect = 9e-09
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Frame = +1
Query: 256 WNETTQGLILGGFYFGYAATQVPGGYLAEKYGGKWTLGLGLLSTALFTFLTPFVTRLGGA 435
W+++ G++ F +GY + + GG L ++YGGK + G+ +L TFLTP+ +
Sbjct: 145 WSKSFSGIVQSSFLWGYLISPIAGGTLVDRYGGKVVMAWGVALWSLATFLTPWAA--DSS 202
Query: 436 TW-LFILRVLQGMGEGPTMPAL 498
W L R + G+ EG +P +
Sbjct: 203 LWALLAARAMVGVAEGVALPCM 224
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +3
Query: 507 VARWVPPNERSFQGALVFGGAQIGNIFGSYMSGILLANG 623
VARW PP ERS + G Q+GN+ G +S IL++ G
Sbjct: 228 VARWFPPTERSRAVGIAMAGFQLGNVVGLMLSPILMSQG 266
>At5g44370.1 68418.m05433 transporter-related similar to vesicular
glutamate transporter 2 [Mus musculus] GI:15811369,
Na-dependent inorganic phosphate cotransporter [Homo
sapiens] GI:7328923; contains Pfam profile PF00083:
major facilitator superfamily protein
Length = 432
Score = 55.6 bits (128), Expect = 3e-08
Identities = 29/80 (36%), Positives = 46/80 (57%)
Frame = +1
Query: 259 NETTQGLILGGFYFGYAATQVPGGYLAEKYGGKWTLGLGLLSTALFTFLTPFVTRLGGAT 438
N++++G IL F+ GYA +QVPGG+ A+K GG+ L L + + FL P G
Sbjct: 44 NQSSKGTILSTFFVGYACSQVPGGWAAQKIGGRKVLLLSFVLWSSTCFLVPLDPNRVGL- 102
Query: 439 WLFILRVLQGMGEGPTMPAL 498
L + R+L G+ +G P++
Sbjct: 103 -LVVARLLVGVAQGFIFPSI 121
Score = 28.7 bits (61), Expect = 3.5
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +3
Query: 507 VARWVPPNERSFQGALVFGGAQIGNIFGSYM 599
+A+WVPP+ERS ++ G +G G ++
Sbjct: 125 LAQWVPPHERSRLVSITTSGMYLGAALGMWL 155
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +2
Query: 50 IPQRYILGVMGLMGVCNAYTMRVCLNLAITQMVNKTITNET 172
IPQRY++ + + C Y RV ++A T + N++
Sbjct: 6 IPQRYVIVFLTFLSTCVCYIERVGFSIAYTVAADAAGINQS 46
>At2g38060.1 68415.m04672 transporter-related low similarity to
vesicular glutamate transporter 3 [Homo sapiens]
GI:21213895, brain specific Na+-dependent inorganic
phosphate cotransporter [Rattus norvegicus] GI:507415;
contains Pfam profile PF00083: major facilitator
superfamily protein
Length = 512
Score = 53.6 bits (123), Expect = 1e-07
Identities = 27/81 (33%), Positives = 42/81 (51%)
Frame = +1
Query: 256 WNETTQGLILGGFYFGYAATQVPGGYLAEKYGGKWTLGLGLLSTALFTFLTPFVTRLGGA 435
W+ + G++ F +GY + V GG L ++YGGK L G+ +L T LTP+
Sbjct: 132 WSSSFLGVVQSSFLWGYIFSSVIGGALVDRYGGKRVLAWGVALWSLATLLTPWAA-AHST 190
Query: 436 TWLFILRVLQGMGEGPTMPAL 498
L +R G+ EG MP++
Sbjct: 191 LALLCVRAFFGLAEGVAMPSM 211
Score = 28.7 bits (61), Expect = 3.5
Identities = 10/38 (26%), Positives = 23/38 (60%)
Frame = +3
Query: 507 VARWVPPNERSFQGALVFGGAQIGNIFGSYMSGILLAN 620
++RW P +ER+ + G +GN+ G ++ ++L++
Sbjct: 215 LSRWFPMDERASAVGISMAGFHMGNVVGLLLTPLMLSS 252
>At3g13050.1 68416.m01626 transporter-related low similarity to
apical organic cation transporter [Sus scrofa]
GI:2062135, SP|Q02563 Synaptic vesicle protein 2 (SV2)
{Rattus norvegicus}; contains Pfam profile PF00083:
major facilitator superfamily protein
Length = 500
Score = 32.7 bits (71), Expect = 0.22
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Frame = +1
Query: 256 WNETT--QGLILGGFYFGYAATQVPGGYLAEKYGGKWTLGLGLLSTALFTFLTPFVTRLG 429
WN + + LI + G G +++K+G + G + TA+ TF+ F++
Sbjct: 55 WNLSARQESLITSVVFAGMLIGAYSWGIVSDKHGRR----KGFIITAVVTFVAGFLSAFS 110
Query: 430 -GATWLFILRVLQGMGEG 480
WL ILR L G+G G
Sbjct: 111 PNYMWLIILRCLVGLGLG 128
>At5g38560.1 68418.m04662 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 681
Score = 31.9 bits (69), Expect = 0.38
Identities = 23/77 (29%), Positives = 30/77 (38%), Gaps = 1/77 (1%)
Frame = -1
Query: 488 IVGPSPIPCNTRRINSHVAPPNLVTNGVR-NVKSAVLNNPRPRVHLPPYFSAKYPPGTCV 312
+V P PI +S APP L T + V P P PP S+ PP
Sbjct: 3 LVPPLPILSPPSSNSSTTAPPPLQTQPTTPSAPPPVTPPPSPPQSPPPVVSSSPPPPVVS 62
Query: 311 AAYPK*NPPKIKPCVVS 261
+ P +PP P + S
Sbjct: 63 SPPPSSSPPPSPPVITS 79
>At5g13740.1 68418.m01599 sugar transporter family protein contains
Pfam profile PF00083: major facilitator superfamily
protein
Length = 486
Score = 31.5 bits (68), Expect = 0.50
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +1
Query: 274 GLILGGFYFGYAATQVPGGYLAEKYGGKWTLGLGLLSTALFTFL 405
G + F G A T V G +A++YG K + LG +S A+F L
Sbjct: 81 GFVGCSFMLGRALTSVFWGIVADRYGRKPIILLGTISIAIFNAL 124
>At5g59590.1 68418.m07467 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 449
Score = 29.1 bits (62), Expect = 2.7
Identities = 18/80 (22%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Frame = -1
Query: 578 AYLSTTKHQSTLERTFVRRHPARYIIIRAGIVGP--SPIPCNTRRINSHVAPPNLVTNGV 405
++L K T ++ F HP RY + + GP S + + +N+ A ++ N
Sbjct: 155 SFLIDMKDPETQDKVFPGLHPLRYKDLPTSVFGPIESTLKVYSETVNTRTASA-VIINSA 213
Query: 404 RNVKSAVLNNPRPRVHLPPY 345
++S+ L + ++ +P Y
Sbjct: 214 SCLESSSLARLQQQLQVPVY 233
>At5g18230.1 68418.m02139 transcription regulator NOT2/NOT3/NOT5
family protein contains Pfam domain PF04153: NOT2 / NOT3
/ NOT5 family
Length = 843
Score = 29.1 bits (62), Expect = 2.7
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = -1
Query: 479 PSPIPCNTRRINSHVAPPNLVTNGVRNVKSAV--LNNPRPRVHLPPYFSAKYPPGTCVAA 306
PSPIP N RI S + + + V+S V L +P ++ LPP +AK GT +
Sbjct: 396 PSPIPANGSRI-SATSAAEVAKRNIMGVESNVQPLTSPLSKMVLPP--TAKGNDGTASDS 452
Query: 305 YP 300
P
Sbjct: 453 NP 454
>At2g16130.1 68415.m01849 mannitol transporter, putative similar to
mannitol transporter [Apium graveolens var. dulce]
GI:12004316; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 511
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/55 (25%), Positives = 22/55 (40%)
Frame = +1
Query: 283 LGGFYFGYAATQVPGGYLAEKYGGKWTLGLGLLSTALFTFLTPFVTRLGGATWLF 447
+GG +F A + G +GL T + TF+ F G TW++
Sbjct: 357 MGGMFFSLTALGTSLTVIDRNPGQTLKWAIGLAVTTVMTFVATFSLGAGPVTWVY 411
>At5g54250.2 68418.m06758 cyclic nucleotide-regulated ion channel /
cyclic nucleotide-gated channel (CNGC4) identical to
cyclic nucleotide and calmodulin-regulated ion channel
(cngc4) GI:4581203 from [Arabidopsis thaliana]
Length = 694
Score = 27.9 bits (59), Expect = 6.2
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +1
Query: 238 TVRHIYWNETTQGLILGGFYFGYAATQVPGGYLAEKYGGKWTLGLGLLSTA 390
++RH+ N T G I G ++G A + A G W L LG+ +A
Sbjct: 239 SIRHLRRNATLSGYIFGTVWWGIALNMIAYFVAAHAAGACWYL-LGVQRSA 288
>At5g54250.1 68418.m06757 cyclic nucleotide-regulated ion channel /
cyclic nucleotide-gated channel (CNGC4) identical to
cyclic nucleotide and calmodulin-regulated ion channel
(cngc4) GI:4581203 from [Arabidopsis thaliana]
Length = 694
Score = 27.9 bits (59), Expect = 6.2
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +1
Query: 238 TVRHIYWNETTQGLILGGFYFGYAATQVPGGYLAEKYGGKWTLGLGLLSTA 390
++RH+ N T G I G ++G A + A G W L LG+ +A
Sbjct: 239 SIRHLRRNATLSGYIFGTVWWGIALNMIAYFVAAHAAGACWYL-LGVQRSA 288
>At5g23870.3 68418.m02803 pectinacetylesterase family protein
contains Pfam profile: PF03283 pectinacetylesterase
Length = 451
Score = 27.5 bits (58), Expect = 8.2
Identities = 18/52 (34%), Positives = 21/52 (40%)
Frame = +3
Query: 426 RRCHVAVYSSSVARNGRGSNNASSYDNVARWVPPNERSFQGALVFGGAQIGN 581
RR S +V G SNNAS + W R GA G +Q GN
Sbjct: 94 RRGSTRYMSKTVVFTGVLSNNASQNPDFYNWNKVRLRYCDGASFAGDSQFGN 145
>At5g23870.2 68418.m02802 pectinacetylesterase family protein
contains Pfam profile: PF03283 pectinacetylesterase
Length = 436
Score = 27.5 bits (58), Expect = 8.2
Identities = 18/52 (34%), Positives = 21/52 (40%)
Frame = +3
Query: 426 RRCHVAVYSSSVARNGRGSNNASSYDNVARWVPPNERSFQGALVFGGAQIGN 581
RR S +V G SNNAS + W R GA G +Q GN
Sbjct: 94 RRGSTRYMSKTVVFTGVLSNNASQNPDFYNWNKVRLRYCDGASFAGDSQFGN 145
>At5g23870.1 68418.m02804 pectinacetylesterase family protein
contains Pfam profile: PF03283 pectinacetylesterase
Length = 415
Score = 27.5 bits (58), Expect = 8.2
Identities = 18/52 (34%), Positives = 21/52 (40%)
Frame = +3
Query: 426 RRCHVAVYSSSVARNGRGSNNASSYDNVARWVPPNERSFQGALVFGGAQIGN 581
RR S +V G SNNAS + W R GA G +Q GN
Sbjct: 94 RRGSTRYMSKTVVFTGVLSNNASQNPDFYNWNKVRLRYCDGASFAGDSQFGN 145
>At4g36670.1 68417.m05203 mannitol transporter, putative similar to
mannitol transporter [Apium graveolens var. dulce]
GI:12004316; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 493
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 334 LAEKYGGKWTLGLGLLSTALFTFLTPFVTRLGGATWLF 447
+A+ GGK L L A ++F+ F LG TW++
Sbjct: 364 MAQNAGGKLAWALVLSIVAAYSFVAFFSIGLGPITWVY 401
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,465,353
Number of Sequences: 28952
Number of extensions: 396848
Number of successful extensions: 1152
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1079
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1146
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1354097952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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