Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00318
(714 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0) 105 3e-23
SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0) 67 2e-11
SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06) 65 5e-11
SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0) 61 8e-10
SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41) 58 7e-09
SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33) 58 7e-09
SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0) 57 1e-08
SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 7e-08
SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27) 54 2e-07
SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 8e-06
SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_59094| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.011
SB_28181| Best HMM Match : RVP (HMM E-Value=0.00058) 37 0.014
SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0) 37 0.014
SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.033
SB_5372| Best HMM Match : ER_lumen_recept (HMM E-Value=2.5e-19) 35 0.057
SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21) 34 0.100
SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19) 34 0.100
SB_25332| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.53
SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07) 31 0.70
SB_2701| Best HMM Match : Thioredoxin (HMM E-Value=4.8e-05) 31 0.93
SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19) 30 1.6
SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32) 30 2.1
SB_45044| Best HMM Match : Thioredoxin (HMM E-Value=1.1) 28 6.5
SB_38688| Best HMM Match : TP901-1_ORF40 (HMM E-Value=1.7) 28 6.5
SB_37000| Best HMM Match : Astacin (HMM E-Value=5.5e-19) 28 6.5
SB_13876| Best HMM Match : PEARLI-4 (HMM E-Value=4.5) 28 6.5
SB_51588| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
>SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 1056
Score = 105 bits (253), Expect = 3e-23
Identities = 58/156 (37%), Positives = 82/156 (52%), Gaps = 3/156 (1%)
Frame = +2
Query: 254 VKTDDPPVALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGXRESNGIXXV-- 427
+K +DPPV LAKVDCTE GK TC ++ VSGYPTLKIFR GE+S +Y+G R+S+GI
Sbjct: 584 LKKNDPPVPLAKVDCTEAGKDTCSKYGVSGYPTLKIFRNGEMSKDYDGPRDSSGIIRYMK 643
Query: 428 -HACPSWTQLQGAPYSG*F*XXXXXXXXXXXXXXEKESDLKESSLKQLTN*GRRLLLLIL 604
A PS +++ + + + DLK + ++
Sbjct: 644 KQAGPSSVEIKSVDHLE--KKLDDAESNVVVGFLDGDDDLKNAFMRTANEMRDSFSFAHA 701
Query: 605 QPMRFLKKTGYKNNVVLYRPKRLQNKFEDSSVAFDG 712
L+K YKN +V++RPK L K E S +A+ G
Sbjct: 702 SVTDVLEKYNYKNQIVVFRPKHLHTKLEPSFIAYTG 737
Score = 65.3 bits (152), Expect = 5e-11
Identities = 27/53 (50%), Positives = 36/53 (67%)
Frame = +3
Query: 90 IIYLCKAAEEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAA 248
++++ DVLDL DS+F + ++ D LV F+APWCGHCKRL PEY AA
Sbjct: 529 LLFVGSTLSSDVLDLGDSNFKSGVAGKDIMLVEFFAPWCGHCKRLAPEYETAA 581
Score = 42.7 bits (96), Expect = 3e-04
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +3
Query: 180 LVMFYAPWCGHCKRLKPEY 236
L+ FYAPWCGHCK L+P+Y
Sbjct: 884 LIEFYAPWCGHCKSLEPKY 902
Score = 37.5 bits (83), Expect = 0.011
Identities = 15/41 (36%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Frame = +2
Query: 290 VDCTEGGKSTCE-QFSVSGYPTLKIFRKGELSSEYNGXRES 409
+DC G++TC +F + +PTLK+FR G+ +Y G +++
Sbjct: 434 MDCFGAGRATCYYRFGIHQWPTLKLFRYGQPWGDYTGPQDT 474
Score = 34.7 bits (76), Expect = 0.075
Identities = 13/31 (41%), Positives = 23/31 (74%)
Frame = +1
Query: 553 FLKTADKLREEVTFAHSSANEVLEKNRIQKQ 645
F++TA+++R+ +FAH+S +VLEK + Q
Sbjct: 685 FMRTANEMRDSFSFAHASVTDVLEKYNYKNQ 715
>SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 536
Score = 66.9 bits (156), Expect = 2e-11
Identities = 33/63 (52%), Positives = 41/63 (65%), Gaps = 4/63 (6%)
Frame = +3
Query: 75 VLLLGIIYLCKAAE----EDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAV 242
VLLL ++ L + E EDVL LT+ +F ++ + LV FYAPWCGHCK L PEYA
Sbjct: 6 VLLLALVSLAYSEEIKEEEDVLVLTEKNFDEAVAANKHVLVEFYAPWCGHCKALAPEYAK 65
Query: 243 AAG 251
AAG
Sbjct: 66 AAG 68
Score = 42.3 bits (95), Expect = 4e-04
Identities = 23/50 (46%), Positives = 31/50 (62%)
Frame = +2
Query: 254 VKTDDPPVALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGXR 403
+K++ + LAKVD T K E+F V GYPT+K F+ G+ SEY G R
Sbjct: 70 LKSEKSEIKLAKVDATAETKLG-EKFQVQGYPTIKFFKDGK-PSEYAGGR 117
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/34 (50%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +3
Query: 132 LTDSDFSAVLSQHD-TALVMFYAPWCGHCKRLKP 230
L +F V D V FYAPWCGHCK+L P
Sbjct: 389 LCGKNFDEVARNKDKNVFVEFYAPWCGHCKQLAP 422
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +2
Query: 263 DDPPVALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGXR 403
D + +AK+D T + E V +PT+K F K + +YNG R
Sbjct: 433 DHADIVVAKMDSTA---NEVEGVKVHSFPTIKYFPKEGEAVDYNGGR 476
>SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06)
Length = 70
Score = 65.3 bits (152), Expect = 5e-11
Identities = 27/53 (50%), Positives = 36/53 (67%)
Frame = +3
Query: 90 IIYLCKAAEEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAA 248
++++ DVLDL DS+F + ++ D LV F+APWCGHCKRL PEY AA
Sbjct: 4 LLFVGSTLSSDVLDLGDSNFKSGVAGKDIMLVEFFAPWCGHCKRLAPEYETAA 56
>SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 362
Score = 61.3 bits (142), Expect = 8e-10
Identities = 27/46 (58%), Positives = 36/46 (78%), Gaps = 1/46 (2%)
Frame = +3
Query: 114 EEDVLDLTDSDFSA-VLSQHDTALVMFYAPWCGHCKRLKPEYAVAA 248
+EDV++LTD++F VL+ D LV F+APWCGHC+RL PE+A AA
Sbjct: 78 KEDVVELTDTNFEKEVLNSKDLWLVEFFAPWCGHCQRLAPEWAKAA 123
Score = 31.1 bits (67), Expect = 0.93
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = +2
Query: 329 FSVSGYPTLKIFRKGELS-SEYNGXRESNGI 418
+++ G+PT+KIF + S +YNG R + GI
Sbjct: 11 YNIRGFPTIKIFGANKNSPQDYNGQRTAQGI 41
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 4/38 (10%)
Frame = +2
Query: 317 TCEQFSVSGYPTLKIFRKGELSS----EYNGXRESNGI 418
T ++ V GYPT+K+F G +S +Y G R ++ I
Sbjct: 143 TASRYQVQGYPTIKVFAAGIKNSHSVEDYQGGRTASDI 180
>SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 60.1 bits (139), Expect = 2e-09
Identities = 25/45 (55%), Positives = 31/45 (68%)
Frame = +3
Query: 114 EEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAA 248
E+DV L +F V+ +++ LV FYAPWCGHCK L PEYA AA
Sbjct: 60 EDDVSVLNSKNFDRVIEENNIILVEFYAPWCGHCKSLAPEYAKAA 104
Score = 59.3 bits (137), Expect = 3e-09
Identities = 30/57 (52%), Positives = 37/57 (64%)
Frame = +2
Query: 248 RPVKTDDPPVALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGXRESNGI 418
+ +K +DPPV AK+D T ++F VSGYPTLKIFRKG EY G RE +GI
Sbjct: 105 KKMKLNDPPVPFAKMDATVAS-DIAQRFDVSGYPTLKIFRKG-TPYEYEGPREESGI 159
Score = 54.4 bits (125), Expect = 9e-08
Identities = 22/41 (53%), Positives = 29/41 (70%)
Frame = +3
Query: 126 LDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAA 248
L LT +F+ V+++ LV F+APWCGHCK+L PEY AA
Sbjct: 179 LTLTKENFTEVVNRESLMLVEFFAPWCGHCKQLAPEYEKAA 219
Score = 52.0 bits (119), Expect = 5e-07
Identities = 25/51 (49%), Positives = 35/51 (68%)
Frame = +2
Query: 266 DPPVALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGXRESNGI 418
DPP+ LA VD T + +++ V GYPTLK+FRKG+ ++EY G R+ GI
Sbjct: 226 DPPIPLAIVDATIESE-LAQKYEVQGYPTLKVFRKGK-ATEYKGQRDQYGI 274
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +3
Query: 105 KAAEEDVLDLTDSDFSAVLSQ-HDTALVMFYAPWCG 209
K+ +E V + F +++ L+ FYAPWCG
Sbjct: 521 KSNKEPVTVVVGKTFDEIVNDPKKDVLIEFYAPWCG 556
>SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41)
Length = 271
Score = 58.0 bits (134), Expect = 7e-09
Identities = 28/50 (56%), Positives = 32/50 (64%), Gaps = 3/50 (6%)
Frame = +3
Query: 108 AAEED---VLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAA 248
+AEED V L SDF L+ + LVMFYAPWCGHCK KP+Y AA
Sbjct: 141 SAEEDSSLVKQLDGSDFWGYLNNTEHVLVMFYAPWCGHCKNAKPKYEKAA 190
Score = 54.4 bits (125), Expect = 9e-08
Identities = 20/45 (44%), Positives = 27/45 (60%)
Frame = +3
Query: 114 EEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAA 248
+ V+ LTD + H+ LVM++APWCGHC +KP Y AA
Sbjct: 49 DSKVVFLTDESHDEFIKSHENVLVMYFAPWCGHCNEMKPNYYKAA 93
Score = 44.4 bits (100), Expect = 9e-05
Identities = 20/47 (42%), Positives = 29/47 (61%)
Frame = +2
Query: 263 DDPPVALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGXR 403
D P AK+DCT+ G C++ V+GYPTL+ + G+ EY+G R
Sbjct: 195 DQPNRVFAKLDCTKFG-DVCDKEEVNGYPTLRYYLYGKFVVEYDGDR 240
Score = 35.9 bits (79), Expect = 0.033
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = +2
Query: 278 ALAKVDCTEGGKSTCEQFSVSGYPT 352
ALA VDCTE K+TC Q + GYPT
Sbjct: 19 ALAAVDCTES-KNTCNQRDIKGYPT 42
Score = 35.1 bits (77), Expect = 0.057
Identities = 16/69 (23%), Positives = 34/69 (49%)
Frame = +2
Query: 263 DDPPVALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGXRESNGIXXVHACPS 442
+D LA VDCT+ K ++ +++GYPT+K+++ + + +S+ + +
Sbjct: 99 EDANCNLAAVDCTKH-KDVAKKVALAGYPTVKLYKASNTAKAASAEEDSSLVKQLDGSDF 157
Query: 443 WTQLQGAPY 469
W L +
Sbjct: 158 WGYLNNTEH 166
>SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33)
Length = 386
Score = 58.0 bits (134), Expect = 7e-09
Identities = 23/43 (53%), Positives = 31/43 (72%)
Frame = +3
Query: 120 DVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAA 248
+V+ L D F ++++ + LVMFYAPWCGHCK +KPEY AA
Sbjct: 83 EVVHLRDDMFDDFVAKNPSVLVMFYAPWCGHCKAMKPEYVDAA 125
Score = 54.8 bits (126), Expect = 7e-08
Identities = 22/43 (51%), Positives = 29/43 (67%)
Frame = +3
Query: 120 DVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAA 248
+V L+D+ F + + + LVMFYAPWCGHCK+ KPE AA
Sbjct: 196 EVYHLSDTTFKSFVKKKKHVLVMFYAPWCGHCKKAKPELMSAA 238
Score = 34.7 bits (76), Expect = 0.075
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +3
Query: 180 LVMFYAPWCGHCKRLKPEYAVAA 248
+++ Y CG+CKR KPE+A AA
Sbjct: 3 VIVLYIAGCGYCKRFKPEFAAAA 25
Score = 28.3 bits (60), Expect = 6.5
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +3
Query: 120 DVLDLTDSDFSAVLSQHDTALVMFYAP 200
+V LT F L D+ LVMFYAP
Sbjct: 335 NVQHLTQDTFDEALKTFDSILVMFYAP 361
>SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 295
Score = 57.2 bits (132), Expect = 1e-08
Identities = 26/59 (44%), Positives = 36/59 (61%)
Frame = +3
Query: 60 GSLKFVLLLGIIYLCKAAEEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEY 236
G++ F L L + + + V+DLT +F V++ ALV FYAPWCGHCK+L P Y
Sbjct: 4 GTVLFKLFL-LFSISSLTQGKVIDLTKDNFDEVVNGEKFALVEFYAPWCGHCKQLAPTY 61
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +2
Query: 260 TDDPPVALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELS-SEYNGXRESN 412
T V +AKVD +G + +F V G+PT+K F KG + EYNG R+ N
Sbjct: 69 TQSSDVIIAKVDA-DGDRDLGSRFDVKGFPTIKYFPKGSTTPEEYNGGRDIN 119
>SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 488
Score = 54.8 bits (126), Expect = 7e-08
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Frame = +3
Query: 63 SLKFVLLLGIIYLCKAAEED-VLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYA 239
++ FV+ L +I A +E+ + +LTD DF L + LV FYAPWC C L+P+Y
Sbjct: 3 AIAFVVALCVIAPSYARKENPIFELTDQDFDNFLKDKEVMLVDFYAPWCSDCDNLRPKYE 62
Query: 240 VAA 248
AA
Sbjct: 63 KAA 65
>SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27)
Length = 472
Score = 53.6 bits (123), Expect = 2e-07
Identities = 20/41 (48%), Positives = 28/41 (68%)
Frame = +3
Query: 114 EEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEY 236
E +L+L DS+F + +H LV FYAPWC HCK++ P+Y
Sbjct: 133 EPTLLELDDSNFEPAVQKHKFVLVDFYAPWCFHCKKMAPDY 173
Score = 48.8 bits (111), Expect = 4e-06
Identities = 20/46 (43%), Positives = 29/46 (63%)
Frame = +3
Query: 111 AEEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAA 248
A VL+L D +F+ + +++ LV FYAPWC C+RL P + AA
Sbjct: 49 ASPAVLNLNDQNFNETIKKNEYVLVDFYAPWCSDCQRLSPLFDTAA 94
Score = 37.5 bits (83), Expect = 0.011
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = +2
Query: 275 VALAKVDCTEGG---KSTCEQFSVSGYPTLKIFRKGELSSEYNG 397
V LAKVDC+ K TC++++V PT+ +F G+ E+ G
Sbjct: 188 VRLAKVDCSANNMATKKTCKKYNVKFLPTIYLFHDGKFVEEFEG 231
>SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 564
Score = 48.0 bits (109), Expect = 8e-06
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +2
Query: 284 AKVDCTEG-GKSTCEQFSVSGYPTLKIFRKGELSSEYNGXRESNGIXXVHACPSWTQLQG 460
AKVDCT+ K C+ F + GYP++K+F+ G+ + +Y G R + + T Q
Sbjct: 75 AKVDCTDPRSKVLCDNFKIEGYPSVKLFKFGKYAGDYIGQRTDAALVNYMESVTSTASQQ 134
Query: 461 APYS 472
AP++
Sbjct: 135 APFT 138
Score = 45.6 bits (103), Expect = 4e-05
Identities = 19/42 (45%), Positives = 25/42 (59%)
Frame = +3
Query: 123 VLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAA 248
V DL +F ++ + D LV FYAPWC HC+ L P+ AA
Sbjct: 22 VYDLNAQNFDQMIREKDIMLVDFYAPWCHHCQELLPQLEGAA 63
>SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 711
Score = 41.9 bits (94), Expect = 5e-04
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = +3
Query: 147 FSAVLSQHDTALVMFYAPWCGHCKRLKPEY 236
F+ VL+ D +V FYAPWCG C R P+Y
Sbjct: 444 FTDVLASEDAWVVDFYAPWCGPCMRFAPKY 473
Score = 38.7 bits (86), Expect = 0.005
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +3
Query: 93 IYLCKAAEEDVLDLTDSDF-SAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAA 248
++ ++ +V L DF S+V S V F+APWC C RL PEY AA
Sbjct: 276 LFAKESVSSNVHALGPEDFPSSVTSPSRPFFVDFFAPWCPPCMRLLPEYRKAA 328
Score = 28.7 bits (61), Expect = 4.9
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +2
Query: 272 PVALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGE 376
PV VDCT + C Q+++ YPT ++ +
Sbjct: 335 PVGFGTVDCTVHSQ-LCHQYNIRSYPTTILYNNSQ 368
>SB_59094| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 37.5 bits (83), Expect = 0.011
Identities = 15/41 (36%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Frame = +2
Query: 290 VDCTEGGKSTCE-QFSVSGYPTLKIFRKGELSSEYNGXRES 409
+DC G++TC +F + +PTLK+FR G+ +Y G +++
Sbjct: 237 MDCFGAGRATCYYRFGIHQWPTLKLFRYGQPWGDYTGPQDT 277
>SB_28181| Best HMM Match : RVP (HMM E-Value=0.00058)
Length = 664
Score = 37.1 bits (82), Expect = 0.014
Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 4/40 (10%)
Frame = +3
Query: 147 FSAVLSQ--HDTAL--VMFYAPWCGHCKRLKPEYAVAAGL 254
F+ VLS H++ L V FYAPWCG +R E+ +AA L
Sbjct: 441 FAKVLSSFLHNSPLNFVFFYAPWCGQSRRAVEEFNIAASL 480
>SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0)
Length = 308
Score = 37.1 bits (82), Expect = 0.014
Identities = 20/41 (48%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Frame = +3
Query: 123 VLDLTDSDFSAVLSQHDTALVM--FYAPWCGHCKRLKPEYA 239
VL+L DS F+A L+ T LV+ F A WCG CK + P Y+
Sbjct: 11 VLEL-DSQFTAELTNAGTKLVVADFTASWCGPCKSIAPVYS 50
>SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 35.9 bits (79), Expect = 0.033
Identities = 13/34 (38%), Positives = 25/34 (73%), Gaps = 2/34 (5%)
Frame = +3
Query: 141 SDFSAVLSQHDTALVM--FYAPWCGHCKRLKPEY 236
++F++V++ LV+ FYA WCG C+++KP++
Sbjct: 19 AEFNSVINNTKDKLVVIDFYAEWCGPCRQIKPKF 52
>SB_5372| Best HMM Match : ER_lumen_recept (HMM E-Value=2.5e-19)
Length = 229
Score = 35.1 bits (77), Expect = 0.057
Identities = 16/46 (34%), Positives = 28/46 (60%)
Frame = +2
Query: 275 VALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGXRESN 412
V LA+V+C + C+ +++ YPT+K+FRKG Y G +++
Sbjct: 10 VRLARVNCFDW-TDVCQDNNITVYPTIKLFRKGADELIYGGPLDAD 54
>SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21)
Length = 186
Score = 34.3 bits (75), Expect = 0.100
Identities = 15/45 (33%), Positives = 27/45 (60%)
Frame = +2
Query: 275 VALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGXRES 409
+ +AKVDCT + C + ++ YPT+K++ G++ Y G R +
Sbjct: 19 LTIAKVDCTSD-VNLCVKQNIRAYPTMKLYYDGDI-KRYTGRRNA 61
Score = 31.9 bits (69), Expect = 0.53
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +3
Query: 183 VMFYAPWCGHCKRLKP 230
V FYAPWC HC +L P
Sbjct: 111 VKFYAPWCIHCIKLAP 126
Score = 31.9 bits (69), Expect = 0.53
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +2
Query: 335 VSGYPTLKIFRKGELSSEYNGXRESNGI 418
++GYPTL +F+ G EY+G R+ + +
Sbjct: 146 INGYPTLMLFKDGVQKKEYSGNRDLDSL 173
>SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19)
Length = 975
Score = 34.3 bits (75), Expect = 0.100
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +3
Query: 135 TDSDFSAVLSQHDTALVMFYAPWCGHCKRLKP 230
TDS V++ L++FY PWCG C P
Sbjct: 524 TDSFDDIVINNDQDVLLVFYTPWCGMCINFAP 555
>SB_25332| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 41
Score = 31.9 bits (69), Expect = 0.53
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +2
Query: 335 VSGYPTLKIFRKGELSSEYNGXRESNGI 418
++GYPTL +F+ G EY+G R+ + +
Sbjct: 1 INGYPTLMLFKDGVQKKEYSGNRDLDSL 28
>SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07)
Length = 438
Score = 31.5 bits (68), Expect = 0.70
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +3
Query: 144 DFSAVLSQHDTALVMFYAPWCGHCKRLKPEY 236
+F L ++ A + F A WCG C+ + P++
Sbjct: 3 EFDKFLKDNEVAAIDFTATWCGPCRMIGPKF 33
>SB_2701| Best HMM Match : Thioredoxin (HMM E-Value=4.8e-05)
Length = 215
Score = 31.1 bits (67), Expect = 0.93
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = +3
Query: 135 TDSDFSAVLSQHDT--ALVMFYAPWCGHCKRL 224
T +DF +LS A+V F+APW HC ++
Sbjct: 8 TVTDFDRILSSSSNVLAVVHFFAPWAPHCNQM 39
>SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19)
Length = 335
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/58 (22%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +3
Query: 54 MFGSLKFVLLLGIIYLCKAAE-EDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRL 224
+F + F+L+ I+ + + +++ T+ + + + FYAPW HC+R+
Sbjct: 4 LFITNTFLLISLTIFTSTSVHCKKIVEFTNENVDEYVDGSKFVFIFFYAPWDDHCQRI 61
>SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32)
Length = 456
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = +3
Query: 138 DSDFSAVLSQHDTALVM--FYAPWCGHCKRLKPEY 236
DS FS + + + LV+ F A WCG CK + P +
Sbjct: 16 DSFFSVEIERAGSRLVVIDFTATWCGPCKSIAPVF 50
>SB_45044| Best HMM Match : Thioredoxin (HMM E-Value=1.1)
Length = 213
Score = 28.3 bits (60), Expect = 6.5
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +3
Query: 180 LVMFYAPWCGHCKRLKPEYA 239
+++ WCG CK L+P++A
Sbjct: 1 MILITKNWCGACKALRPKFA 20
>SB_38688| Best HMM Match : TP901-1_ORF40 (HMM E-Value=1.7)
Length = 576
Score = 28.3 bits (60), Expect = 6.5
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +3
Query: 123 VLDLTDSDFSAVLSQHDTALVMFYAPWCGHCK 218
+ D+ D+ S SQ ++++ +AP C CK
Sbjct: 344 IRDVNDTQLSGTTSQDQYSVLLVHAPCCNACK 375
>SB_37000| Best HMM Match : Astacin (HMM E-Value=5.5e-19)
Length = 1341
Score = 28.3 bits (60), Expect = 6.5
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = -2
Query: 698 QKSLQTCSGVAWDDTRPHCFCIRFFSRTSLAEE*AKVTSSLNLSAVLRNSLS 543
Q + Q V++ R FC+ +SR ++A+ + TS L+L+ R L+
Sbjct: 117 QSTSQFIHSVSFVSKRVDSFCVLLYSRETIAQSIRRQTSFLHLAQTARPVLN 168
>SB_13876| Best HMM Match : PEARLI-4 (HMM E-Value=4.5)
Length = 311
Score = 28.3 bits (60), Expect = 6.5
Identities = 11/43 (25%), Positives = 23/43 (53%)
Frame = +1
Query: 577 REEVTFAHSSANEVLEKNRIQKQCGLVSSQATPEQV*RLFCCL 705
RE++ A S +E++ + G V+S ++PE+ + C +
Sbjct: 192 REDINAASESVSEIIVTATVSSSVGTVTSSSSPEESTKSVCAV 234
>SB_51588| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 231
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +1
Query: 37 HRLNSKCSDH*SLFFYWA*FIYVKRPRRMFSILQIPTFR 153
HR +SKC+ H + FF W+ I+ P + I + F+
Sbjct: 179 HRTHSKCNQHANSFFPWSINIWNNLPGSITDIKEKGKFK 217
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,397,554
Number of Sequences: 59808
Number of extensions: 405268
Number of successful extensions: 1099
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 990
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1096
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1889780269
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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