Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00316X
(596 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembran... 25 0.37
AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembran... 25 0.37
AY321476-2|AAQ23387.1| 257|Tribolium castaneum Ase protein. 23 2.6
AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain tran... 23 2.6
AF230313-1|AAF64147.1| 210|Tribolium castaneum labial protein p... 23 2.6
AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein p... 23 2.6
EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2 p... 22 3.4
AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2 ... 22 4.5
AY052394-1|AAL15468.1| 228|Tribolium castaneum tryptophan oxyge... 21 6.0
AY052392-1|AAL15466.1| 388|Tribolium castaneum tryptophan oxyge... 21 6.0
AY052390-1|AAL15464.1| 388|Tribolium castaneum tryptophan oxyge... 21 6.0
EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetyla... 21 7.9
EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetyla... 21 7.9
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 7.9
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 7.9
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 7.9
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 7.9
AJ845187-1|CAH60164.1| 515|Tribolium castaneum esterase protein. 21 7.9
AJ844897-1|CAH59956.1| 517|Tribolium castaneum esterase protein. 21 7.9
>AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembrane
transporter protein.
Length = 669
Score = 25.4 bits (53), Expect = 0.37
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +3
Query: 417 DGHLLTRTFLVTERITLADVIVFSTLLHAF 506
DGH++ TF +E + DV++ + L+ F
Sbjct: 624 DGHVILETFHFSEADFVMDVVMLAVLIVGF 653
>AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembrane
transporter white protein.
Length = 669
Score = 25.4 bits (53), Expect = 0.37
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +3
Query: 417 DGHLLTRTFLVTERITLADVIVFSTLLHAF 506
DGH++ TF +E + DV++ + L+ F
Sbjct: 624 DGHVILETFHFSEADFVMDVVMLAVLIVGF 653
>AY321476-2|AAQ23387.1| 257|Tribolium castaneum Ase protein.
Length = 257
Score = 22.6 bits (46), Expect = 2.6
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +1
Query: 76 TDVKVAPNFVFGETNKSED 132
++ ++P+ VFG+ KSED
Sbjct: 201 SEQSLSPDTVFGDDGKSED 219
>AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain
transcription factor Labialprotein.
Length = 353
Score = 22.6 bits (46), Expect = 2.6
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = -1
Query: 173 SNAGTFPAGNFFKKSSDL 120
S GT+P+ N++ +SD+
Sbjct: 12 SQHGTYPSDNYYNYTSDI 29
>AF230313-1|AAF64147.1| 210|Tribolium castaneum labial protein
protein.
Length = 210
Score = 22.6 bits (46), Expect = 2.6
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = -1
Query: 173 SNAGTFPAGNFFKKSSDL 120
S GT+P+ N++ +SD+
Sbjct: 12 SQHGTYPSDNYYNYTSDI 29
>AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein
protein.
Length = 253
Score = 22.6 bits (46), Expect = 2.6
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = -1
Query: 173 SNAGTFPAGNFFKKSSDL 120
S GT+P+ N++ +SD+
Sbjct: 12 SQHGTYPSDNYYNYTSDI 29
>EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2
protein.
Length = 535
Score = 22.2 bits (45), Expect = 3.4
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 322 QEAGSSSLSDHDAHCQTRAWVASLLR 245
Q S +L+ + H + +AWVAS R
Sbjct: 225 QGGESEALARLERHLERKAWVASFGR 250
>AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2
protein protein.
Length = 301
Score = 21.8 bits (44), Expect = 4.5
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +1
Query: 262 PKPVSGSGHHGLTVN 306
P PV G G HGL V+
Sbjct: 38 PYPVPGLGLHGLPVD 52
>AY052394-1|AAL15468.1| 228|Tribolium castaneum tryptophan
oxygenase protein.
Length = 228
Score = 21.4 bits (43), Expect = 6.0
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +1
Query: 409 KYWTDIFSHAPSLLPRESHLPMSLS-SVHCC 498
K + D+F+ + L+PR P+S S H C
Sbjct: 182 KVFVDLFNLSTFLIPRSYIPPLSTSMRSHLC 212
>AY052392-1|AAL15466.1| 388|Tribolium castaneum tryptophan
oxygenase protein.
Length = 388
Score = 21.4 bits (43), Expect = 6.0
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +1
Query: 409 KYWTDIFSHAPSLLPRESHLPMSLS-SVHCC 498
K + D+F+ + L+PR P+S S H C
Sbjct: 342 KVFVDLFNLSTFLIPRSYIPPLSTSMRSHLC 372
>AY052390-1|AAL15464.1| 388|Tribolium castaneum tryptophan
oxygenase protein.
Length = 388
Score = 21.4 bits (43), Expect = 6.0
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +1
Query: 409 KYWTDIFSHAPSLLPRESHLPMSLS-SVHCC 498
K + D+F+ + L+PR P+S S H C
Sbjct: 342 KVFVDLFNLSTFLIPRSYIPPLSTSMRSHLC 372
>EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetylase
2B protein.
Length = 528
Score = 21.0 bits (42), Expect = 7.9
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -2
Query: 109 QIRNSVLLSHQSRNIVRRSTLYKRG 35
QIR + +SH+ N L++RG
Sbjct: 218 QIRGTFFVSHKYTNYSAVQDLHRRG 242
>EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetylase
2A protein.
Length = 535
Score = 21.0 bits (42), Expect = 7.9
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -2
Query: 109 QIRNSVLLSHQSRNIVRRSTLYKRG 35
QIR + +SH+ N L++RG
Sbjct: 225 QIRGTFFVSHKYTNYSAVQDLHRRG 249
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 7.9
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = +1
Query: 307 YCLLPVLGSSLTLVSCNSTNRMLNVQSLS 393
Y ++P+L L +C S +++ Q LS
Sbjct: 949 YNIIPILFFMLVCFTCKSNIQLIVAQILS 977
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 7.9
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = +1
Query: 307 YCLLPVLGSSLTLVSCNSTNRMLNVQSLS 393
Y ++P+L L +C S +++ Q LS
Sbjct: 949 YNIIPILFFMLVCFTCKSNIQLIVAQILS 977
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 21.0 bits (42), Expect = 7.9
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = +1
Query: 307 YCLLPVLGSSLTLVSCNSTNRMLNVQSLS 393
Y ++P+L L +C S +++ Q LS
Sbjct: 949 YNIIPILFFMLVCFTCKSNIQLIVAQILS 977
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 21.0 bits (42), Expect = 7.9
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = +1
Query: 307 YCLLPVLGSSLTLVSCNSTNRMLNVQSLS 393
Y ++P+L L +C S +++ Q LS
Sbjct: 949 YNIIPILFFMLVCFTCKSNIQLIVAQILS 977
>AJ845187-1|CAH60164.1| 515|Tribolium castaneum esterase protein.
Length = 515
Score = 21.0 bits (42), Expect = 7.9
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = +1
Query: 409 KYWTDIFSHAP 441
K+WTDI++ P
Sbjct: 501 KFWTDIYNSNP 511
>AJ844897-1|CAH59956.1| 517|Tribolium castaneum esterase protein.
Length = 517
Score = 21.0 bits (42), Expect = 7.9
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = +1
Query: 409 KYWTDIFSHAP 441
K+WTDI++ P
Sbjct: 503 KFWTDIYNSNP 513
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,340
Number of Sequences: 336
Number of extensions: 3405
Number of successful extensions: 19
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -