Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00316X
(596 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g57720.1 68414.m06549 elongation factor 1B-gamma, putative / ... 73 1e-13
At1g09640.1 68414.m01081 elongation factor 1B-gamma, putative / ... 72 3e-13
At1g02930.1 68414.m00260 glutathione S-transferase, putative sim... 45 4e-05
At4g02520.1 68417.m00345 glutathione S-transferase, putative 44 6e-05
At2g02930.1 68415.m00241 glutathione S-transferase, putative 44 8e-05
At2g02380.1 68415.m00176 glutathione S-transferase, putative sim... 42 2e-04
At1g02920.1 68414.m00259 glutathione S-transferase, putative sim... 42 4e-04
At2g02390.2 68415.m00177 glutathione S-transferase zeta 1 (GSTZ1... 40 0.001
At2g02390.1 68415.m00178 glutathione S-transferase zeta 1 (GSTZ1... 40 0.001
At1g02940.1 68414.m00261 glutathione S-transferase, putative sim... 38 0.004
At5g44000.1 68418.m05384 glutathione S-transferase C-terminal do... 38 0.007
At1g02950.2 68414.m00263 glutathione S-transferase, putative sim... 38 0.007
At1g02950.1 68414.m00262 glutathione S-transferase, putative sim... 38 0.007
At2g02390.3 68415.m00179 glutathione S-transferase zeta 1 (GSTZ1... 37 0.012
At1g30230.1 68414.m03698 elongation factor 1-beta / EF-1-beta id... 31 0.58
At2g33000.1 68415.m04044 ubiquitin-associated (UBA)/TS-N domain-... 31 0.77
At2g18110.1 68415.m02105 elongation factor 1-beta, putative / EF... 30 1.3
At1g16840.2 68414.m02028 expressed protein 30 1.3
At5g46550.1 68418.m05731 DNA-binding bromodomain-containing prot... 29 1.8
At5g07270.1 68418.m00829 ankyrin repeat family protein contains ... 29 1.8
At3g06550.1 68416.m00761 O-acetyltransferase-related similar to ... 29 1.8
At4g22130.1 68417.m03199 protein kinase family protein contains ... 29 3.1
At4g35790.3 68417.m05086 phospholipase D delta / PLD delta (PLDD... 28 4.1
At4g35790.2 68417.m05085 phospholipase D delta / PLD delta (PLDD... 28 4.1
At4g35790.1 68417.m05084 phospholipase D delta / PLD delta (PLDD... 28 4.1
At3g60970.1 68416.m06823 ABC transporter family protein ABC tran... 27 7.2
At3g60160.1 68416.m06717 ABC transporter family protein similar ... 27 7.2
At5g38700.1 68418.m04679 expressed protein 27 9.5
At3g49210.1 68416.m05378 expressed protein 27 9.5
>At1g57720.1 68414.m06549 elongation factor 1B-gamma, putative /
eEF-1B gamma, putative similar to elongation factor 1B
gamma GI:3868758 from [Oryza sativa]
Length = 413
Score = 73.3 bits (172), Expect = 1e-13
Identities = 37/77 (48%), Positives = 52/77 (67%)
Frame = +1
Query: 10 VLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGK 189
V++TY N A KALIAA+Y+G ++ + +F G TNKS +FLK P GKVP E+ +G
Sbjct: 4 VMHTYKGNKGANKALIAAEYAGVKIEESADFQMGVTNKSPEFLKMNPIGKVPVLETPEGP 63
Query: 190 VLLTESNAIAYYVANES 240
+ ESNAIA YV+ ++
Sbjct: 64 IF--ESNAIARYVSRKN 78
Score = 52.4 bits (120), Expect = 2e-07
Identities = 30/90 (33%), Positives = 42/90 (46%)
Frame = +3
Query: 255 LATQARVWQWASWSDSELLPASCAWVFPYLGIMQFNKQNVERAKSELLAALKVLDGHLLT 434
L A + QW +S E+ W P +G F+ E A S L L+ L+ HL +
Sbjct: 88 LIEYAHIEQWIDFSSLEIDANMLKWFAPRMGYAPFSAPAEEAAISALKRGLEALNTHLAS 147
Query: 435 RTFLVTERITLADVIVFSTLLHAFHTC*TR 524
TFLV +TLAD++ L F T T+
Sbjct: 148 NTFLVGHSVTLADIVTICNLNLGFATVMTK 177
>At1g09640.1 68414.m01081 elongation factor 1B-gamma, putative /
eEF-1B gamma, putative Similar to elongation factor
1-gamma (gb|EF1G_XENLA). ESTs
gb|T20564,gb|T45940,gb|T04527 come from this gene
Length = 414
Score = 71.7 bits (168), Expect = 3e-13
Identities = 39/74 (52%), Positives = 47/74 (63%)
Frame = +1
Query: 10 VLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGK 189
VL+TY N A KALIAA+Y G + V +F G TNK+ FLK P GKVP E+ +G
Sbjct: 4 VLHTYKGNKSAEKALIAAEYVGVQIDVPSDFQMGVTNKTPAFLKMNPIGKVPVLETPEGS 63
Query: 190 VLLTESNAIAYYVA 231
V ESNAIA YV+
Sbjct: 64 VF--ESNAIARYVS 75
Score = 55.6 bits (128), Expect = 2e-08
Identities = 32/90 (35%), Positives = 45/90 (50%)
Frame = +3
Query: 255 LATQARVWQWASWSDSELLPASCAWVFPYLGIMQFNKQNVERAKSELLAALKVLDGHLLT 434
L A++ QW +S E+ + W P +G M ++ E A S L AL L+ HL +
Sbjct: 88 LIEYAQIEQWIDFSSLEIYASILRWFGPRMGFMPYSAPAEEGAISTLKRALDALNTHLTS 147
Query: 435 RTFLVTERITLADVIVFSTLLHAFHTC*TR 524
T+LV ITLAD+I L F T T+
Sbjct: 148 NTYLVGHSITLADIITVCNLNLGFATVMTK 177
>At1g02930.1 68414.m00260 glutathione S-transferase, putative
similar to glutathione S-transferase GI:860955 from
[Hyoscyamus muticus]
Length = 208
Score = 44.8 bits (101), Expect = 4e-05
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = +1
Query: 4 AGV-LYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESA 180
AG+ ++ +P + + LIA D + + +K E F+ + P GKVPAFE
Sbjct: 2 AGIKVFGHPASTATRRVLIALHEKNVDFEFVHVELKDGEHKKEPFILRNPFGKVPAFEDG 61
Query: 181 DGKVLLTESNAIAYYVANE 237
D K+ ES AI Y+A+E
Sbjct: 62 DFKIF--ESRAITQYIAHE 78
>At4g02520.1 68417.m00345 glutathione S-transferase, putative
Length = 212
Score = 44.4 bits (100), Expect = 6e-05
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Frame = +1
Query: 4 AGV-LYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESA 180
AG+ ++ +P + + LIA D ++ + +K E FL + P G+VPAFE
Sbjct: 2 AGIKVFGHPASIATRRVLIALHEKNLDFELVHVELKDGEHKKEPFLSRNPFGQVPAFE-- 59
Query: 181 DGKVLLTESNAIAYYVAN 234
DG + L ES AI Y+A+
Sbjct: 60 DGDLKLFESRAITQYIAH 77
>At2g02930.1 68415.m00241 glutathione S-transferase, putative
Length = 212
Score = 44.0 bits (99), Expect = 8e-05
Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Frame = +1
Query: 4 AGV-LYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESA 180
AG+ ++ +P + + LIA D ++ + +K E FL + P G+VPAFE
Sbjct: 2 AGIKVFGHPASTSTRRVLIALHEKNLDFELVHVELKDGEHKKEPFLSRNPFGQVPAFE-- 59
Query: 181 DGKVLLTESNAIAYYVANE-SLRGGDWLP 264
DG + L ES AI Y+A+ +G + LP
Sbjct: 60 DGDLKLFESRAITQYIAHRYENQGTNLLP 88
>At2g02380.1 68415.m00176 glutathione S-transferase, putative
similar to gi:167970 gb:AAA72320 gb:AY052332
Length = 223
Score = 42.3 bits (95), Expect = 2e-04
Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 1/110 (0%)
Frame = +1
Query: 13 LYTYPENFRAYKALIAAQYSGTDVKVAP-NFVFGETNKSEDFLKKFPAGKVPAFESADGK 189
LY+Y + A++ IA G D + P N + G+ + S DF K P G VPA DG
Sbjct: 14 LYSYWRSSCAHRVRIALTLKGLDYEYIPVNLLKGDQSDS-DFKKINPMGTVPAL--VDGD 70
Query: 190 VLLTESNAIAYYVANESLRGGDWLPKPVSGSGHHGLTVNYCLLPVLGSSL 339
V++ +S AI Y+ ++ + P+ S +H VNY ++ S +
Sbjct: 71 VVINDSFAIIMYLDDK------YPEPPLLPSDYHKRAVNYQATSIVMSGI 114
>At1g02920.1 68414.m00259 glutathione S-transferase, putative
similar to glutathione S-transferase GI:860955 from
[Hyoscyamus muticus]; supported by cDNA GI:443697.
Length = 209
Score = 41.5 bits (93), Expect = 4e-04
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Frame = +1
Query: 4 AGV-LYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESA 180
AG+ ++ +P + + LIA D + + +K E F+ + P GKVPAFE
Sbjct: 2 AGIKVFGHPASTATRRVLIALHEKNLDFEFVHIELKDGEHKKEPFIFRNPFGKVPAFE-- 59
Query: 181 DGKVLLTESNAIAYYVAN 234
DG L ES AI Y+A+
Sbjct: 60 DGDFKLFESRAITQYIAH 77
>At2g02390.2 68415.m00177 glutathione S-transferase zeta 1 (GSTZ1)
(GST18) identical to SP|Q9ZVQ3|GTZ1_ARATH Glutathione
S-transferase zeta-class 1 (EC 2.5.1.18) (AtGSTZ1)
(Maleylacetone isomerase) (EC 5.2.1.-) (MAI)
{Arabidopsis thaliana}; contains Pfam profiles PF02798:
Glutathione S-transferase, N-terminal domain and
PF00043:Glutathione S-transferase, C-terminal domain
Length = 191
Score = 39.9 bits (89), Expect = 0.001
Identities = 39/134 (29%), Positives = 60/134 (44%), Gaps = 5/134 (3%)
Frame = +1
Query: 13 LYTYPENFRAYKALIAAQYSGTDVKVAP-NFVFGETNKSEDFLKKFPAGKVPAFESADGK 189
LY+Y + A++ IA G D + P N + G+ S DF K P G VPA DG
Sbjct: 11 LYSYWRSSCAHRVRIALALKGLDYEYIPVNLLKGDQFDS-DFKKINPMGTVPAL--VDGD 67
Query: 190 VLLTESNAIAYYVANESLRGGDWLPKPVSGSGHHGLTVNYCLLPVLGSSL----TLVSCN 357
V++ +S AI Y+ +E LP+ + H VNY + ++ S + L
Sbjct: 68 VVINDSFAIIMYL-DEKYPEPPLLPRDL-----HKRAVNYQAMSIVLSGIQPHQNLAVIR 121
Query: 358 STNRMLNVQSLSYW 399
+NV+ + W
Sbjct: 122 YIEEKINVEEKTAW 135
>At2g02390.1 68415.m00178 glutathione S-transferase zeta 1 (GSTZ1)
(GST18) identical to SP|Q9ZVQ3|GTZ1_ARATH Glutathione
S-transferase zeta-class 1 (EC 2.5.1.18) (AtGSTZ1)
(Maleylacetone isomerase) (EC 5.2.1.-) (MAI)
{Arabidopsis thaliana}; contains Pfam profiles PF02798:
Glutathione S-transferase, N-terminal domain and
PF00043:Glutathione S-transferase, C-terminal domain
Length = 221
Score = 39.9 bits (89), Expect = 0.001
Identities = 39/134 (29%), Positives = 60/134 (44%), Gaps = 5/134 (3%)
Frame = +1
Query: 13 LYTYPENFRAYKALIAAQYSGTDVKVAP-NFVFGETNKSEDFLKKFPAGKVPAFESADGK 189
LY+Y + A++ IA G D + P N + G+ S DF K P G VPA DG
Sbjct: 11 LYSYWRSSCAHRVRIALALKGLDYEYIPVNLLKGDQFDS-DFKKINPMGTVPAL--VDGD 67
Query: 190 VLLTESNAIAYYVANESLRGGDWLPKPVSGSGHHGLTVNYCLLPVLGSSL----TLVSCN 357
V++ +S AI Y+ +E LP+ + H VNY + ++ S + L
Sbjct: 68 VVINDSFAIIMYL-DEKYPEPPLLPRDL-----HKRAVNYQAMSIVLSGIQPHQNLAVIR 121
Query: 358 STNRMLNVQSLSYW 399
+NV+ + W
Sbjct: 122 YIEEKINVEEKTAW 135
>At1g02940.1 68414.m00261 glutathione S-transferase, putative
similar to glutathione S-transferase GI:860955 from
[Hyoscyamus muticus]
Length = 256
Score = 38.3 bits (85), Expect = 0.004
Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +1
Query: 13 LYTYPENFRAYKALIAAQYSGTDVK-VAPNFVFGETNKSEDFLKKFPAGKVPAFESADGK 189
+Y YP + + L G + N + G+ K FL P G+VP F DG
Sbjct: 41 IYGYPYSTNTRRVLAVLHEKGLSYDPITVNLIAGD-QKKPSFLAINPFGQVPVF--LDGG 97
Query: 190 VLLTESNAIAYYVA 231
+ LTES AI+ Y+A
Sbjct: 98 LKLTESRAISEYIA 111
>At5g44000.1 68418.m05384 glutathione S-transferase C-terminal
domain-containing protein contains Pfam domain PF00043:
Glutathione S-transferase, C-terminal domain
Length = 399
Score = 37.5 bits (83), Expect = 0.007
Identities = 17/46 (36%), Positives = 31/46 (67%)
Frame = +3
Query: 360 NKQNVERAKSELLAALKVLDGHLLTRTFLVTERITLADVIVFSTLL 497
+++ + A +EL + L ++ HL + +L ER+TLADV +F+TL+
Sbjct: 261 SQEAYDGAVNELFSTLDEIEDHLGSNRYLCGERLTLADVCLFTTLI 306
>At1g02950.2 68414.m00263 glutathione S-transferase, putative
similar to glutathione-S-transferase GI:169887 from
[Silene vulgaris]
Length = 245
Score = 37.5 bits (83), Expect = 0.007
Identities = 20/38 (52%), Positives = 24/38 (63%)
Frame = +1
Query: 118 NKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVA 231
+K+E FL P G+VP FE DG V L ES AI Y+A
Sbjct: 64 HKTEPFLSLNPFGQVPVFE--DGSVKLYESRAITQYIA 99
>At1g02950.1 68414.m00262 glutathione S-transferase, putative
similar to glutathione-S-transferase GI:169887 from
[Silene vulgaris]
Length = 243
Score = 37.5 bits (83), Expect = 0.007
Identities = 20/38 (52%), Positives = 24/38 (63%)
Frame = +1
Query: 118 NKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVA 231
+K+E FL P G+VP FE DG V L ES AI Y+A
Sbjct: 62 HKTEPFLSLNPFGQVPVFE--DGSVKLYESRAITQYIA 97
>At2g02390.3 68415.m00179 glutathione S-transferase zeta 1 (GSTZ1)
(GST18) identical to SP|Q9ZVQ3|GTZ1_ARATH Glutathione
S-transferase zeta-class 1 (EC 2.5.1.18) (AtGSTZ1)
(Maleylacetone isomerase) (EC 5.2.1.-) (MAI)
{Arabidopsis thaliana}; contains Pfam profiles PF02798:
Glutathione S-transferase, N-terminal domain and
PF00043:Glutathione S-transferase, C-terminal domain
Length = 228
Score = 36.7 bits (81), Expect = 0.012
Identities = 39/140 (27%), Positives = 61/140 (43%), Gaps = 11/140 (7%)
Frame = +1
Query: 13 LYTYPENFRAYKALIAAQYSGTDVKVAP-NFVFGETNKS------EDFLKKFPAGKVPAF 171
LY+Y + A++ IA G D + P N + G+ S +DF K P G VPA
Sbjct: 11 LYSYWRSSCAHRVRIALALKGLDYEYIPVNLLKGDQFDSVYRFDLQDFKKINPMGTVPAL 70
Query: 172 ESADGKVLLTESNAIAYYVANESLRGGDWLPKPVSGSGHHGLTVNYCLLPVLGSSL---- 339
DG V++ +S AI Y+ +E LP+ + H VNY + ++ S +
Sbjct: 71 --VDGDVVINDSFAIIMYL-DEKYPEPPLLPRDL-----HKRAVNYQAMSIVLSGIQPHQ 122
Query: 340 TLVSCNSTNRMLNVQSLSYW 399
L +NV+ + W
Sbjct: 123 NLAVIRYIEEKINVEEKTAW 142
>At1g30230.1 68414.m03698 elongation factor 1-beta / EF-1-beta
identical to SP|P48006 Elongation factor 1-beta
(EF-1-beta) {Arabidopsis thaliana}
Length = 231
Score = 31.1 bits (67), Expect = 0.58
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +3
Query: 399 AALKVLDGHLLTRTFLVTERITLADVIVFSTL 494
A LK LD HLLTR+++ + + D+ VF+ L
Sbjct: 11 AGLKKLDEHLLTRSYITGYQASKDDITVFAAL 42
>At2g33000.1 68415.m04044 ubiquitin-associated (UBA)/TS-N
domain-containing protein-related contains weak hit to
Pfam F00627: UBA/TS-N domain; supported by tandem
duplication of ubiquitin-associated (UBA)/TS-N domain
protein (GI:2924790) (TIGR_Ath1:At2g33010) [Arabidopsis
thaliana]
Length = 508
Score = 30.7 bits (66), Expect = 0.77
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +1
Query: 343 LVSCNSTNRMLNVQSLSYWPP*KYWTDIFSHAPSLLPRES 462
L++ + N N +S S WPP K W D H + E+
Sbjct: 195 LMASSQVNTQENQESTSVWPPMKTWVDRICHETKVSREEA 234
>At2g18110.1 68415.m02105 elongation factor 1-beta, putative /
EF-1-beta, putative nearly identical to eEF-1beta
[Arabidopsis thaliana] GI:398606
Length = 231
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +3
Query: 399 AALKVLDGHLLTRTFLVTERITLADVIVFSTL 494
+ LK LD HLLTR+++ + + D+ VF+ L
Sbjct: 11 SGLKKLDEHLLTRSYITGYQASKDDITVFTAL 42
>At1g16840.2 68414.m02028 expressed protein
Length = 161
Score = 29.9 bits (64), Expect = 1.3
Identities = 19/55 (34%), Positives = 25/55 (45%)
Frame = +1
Query: 256 WLPKPVSGSGHHGLTVNYCLLPVLGSSLTLVSCNSTNRMLNVQSLSYWPP*KYWT 420
W+P P SGS HG+ L+ L + LT STN S Y+ YW+
Sbjct: 89 WVPPPGSGSQSHGIAQ---LVVKLANPLTHEESLSTNSSHGWPSSDYFLKGSYWS 140
>At5g46550.1 68418.m05731 DNA-binding bromodomain-containing protein
contains bromodomain, INTERPRO:IPR001487
Length = 494
Score = 29.5 bits (63), Expect = 1.8
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 49 ALIAAQYSGTDVKVAPNFVFGETNKSE 129
A++ AQY+GT +K V G+ NK++
Sbjct: 342 AILKAQYAGTIIKAKHRIVLGQNNKAD 368
>At5g07270.1 68418.m00829 ankyrin repeat family protein contains
ankyrin repeats, Pfam:PF00023
Length = 513
Score = 29.5 bits (63), Expect = 1.8
Identities = 15/28 (53%), Positives = 15/28 (53%)
Frame = +1
Query: 427 FSHAPSLLPRESHLPMSLSSVHCCMLST 510
F PS L RE LPMSL CML T
Sbjct: 368 FKRLPSSLTREMKLPMSLGFCAPCMLHT 395
>At3g06550.1 68416.m00761 O-acetyltransferase-related similar to
O-acetyltransferase (GI:17063556) [Cryptococcus
neoformans var. neoformans]; contains 7 transmembrane
domains
Length = 419
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 426 LLTRTFLVTERITLADVIVFSTLLHAFHTC 515
LL +FLV R+TL +I F+ L+ F+ C
Sbjct: 93 LLDESFLVENRLTLRAIIEFAVLMVYFYIC 122
>At4g22130.1 68417.m03199 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 338
Score = 28.7 bits (61), Expect = 3.1
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 6/74 (8%)
Frame = +1
Query: 37 RAYKALIAAQYSGTDVKVAPNF-----VFGETNKSEDFLKKFPAGKVPAFESADGKVL-L 198
R + A+QY+ + ++VA N + GE + + +FP GK+ A + D L L
Sbjct: 8 RIRSPITASQYTVSSLQVATNSFSQENIIGEGSLGRVYRAEFPNGKIMAIKKIDNAALSL 67
Query: 199 TESNAIAYYVANES 240
E + V+N S
Sbjct: 68 QEEDNFLEAVSNMS 81
>At4g35790.3 68417.m05086 phospholipase D delta / PLD delta
(PLDDELTA) identical to phospholipase D delta SP: Q9C5Y0
from [Arabidopsis thaliana]; supporting cDNA
gi|11761141|dbj|AB031047.1|
Length = 693
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = -2
Query: 292 HDAHCQTRAWVAS--LLRGDFHWQRSKRWHCFQLGALFHRHFRMQALFR 152
HD HC+ A L+ + W+++ RW F L H++ AL R
Sbjct: 429 HDLHCRIDGPAAYDVLINFEQRWRKATRWKEFSLRLKGKTHWQDDALIR 477
>At4g35790.2 68417.m05085 phospholipase D delta / PLD delta
(PLDDELTA) identical to phospholipase D delta SP: Q9C5Y0
from [Arabidopsis thaliana]; supporting cDNA
gi|11761141|dbj|AB031047.1|
Length = 857
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = -2
Query: 292 HDAHCQTRAWVAS--LLRGDFHWQRSKRWHCFQLGALFHRHFRMQALFR 152
HD HC+ A L+ + W+++ RW F L H++ AL R
Sbjct: 429 HDLHCRIDGPAAYDVLINFEQRWRKATRWKEFSLRLKGKTHWQDDALIR 477
>At4g35790.1 68417.m05084 phospholipase D delta / PLD delta
(PLDDELTA) identical to phospholipase D delta SP: Q9C5Y0
from [Arabidopsis thaliana]; supporting cDNA
gi|11761141|dbj|AB031047.1|
Length = 868
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = -2
Query: 292 HDAHCQTRAWVAS--LLRGDFHWQRSKRWHCFQLGALFHRHFRMQALFR 152
HD HC+ A L+ + W+++ RW F L H++ AL R
Sbjct: 440 HDLHCRIDGPAAYDVLINFEQRWRKATRWKEFSLRLKGKTHWQDDALIR 488
>At3g60970.1 68416.m06823 ABC transporter family protein ABC
transporter-like proteins
Length = 1037
Score = 27.5 bits (58), Expect = 7.2
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = +1
Query: 208 NAIAYYVANESLRGGDWLPKPVSGSGHHGLTVNYCL-LPVLGSSLTLVSCNSTNRMLNVQ 384
N ++++V SL LP+ V GL V Y L L VL +++ CN+ N+M++V+
Sbjct: 696 NLLSHFVFAFSLVLLVTLPEGVINPSIAGLGVTYGLSLNVLQATVIWNICNAENKMISVE 755
Query: 385 SL 390
+
Sbjct: 756 RI 757
>At3g60160.1 68416.m06717 ABC transporter family protein similar to
ATP-binding cassette transporter MRP8 GI:18031899 from
[Arabidopsis thaliana]
Length = 1490
Score = 27.5 bits (58), Expect = 7.2
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = +1
Query: 208 NAIAYYVANESLRGGDWLPKPVSGSGHHGLTVNYCL-LPVLGSSLTLVSCNSTNRMLNVQ 384
N ++++V SL LP+ V GL V Y L L VL +++ CN+ N+M++V+
Sbjct: 1149 NLLSHFVFAFSLVLLVTLPEGVINPSIAGLGVTYGLSLNVLQATVIWNICNAENKMISVE 1208
Query: 385 SL 390
+
Sbjct: 1209 RI 1210
>At5g38700.1 68418.m04679 expressed protein
Length = 161
Score = 27.1 bits (57), Expect = 9.5
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -2
Query: 220 KRWHCFQLGALFHRHFR 170
KRWH F+L LF +H +
Sbjct: 13 KRWHMFELRNLFSKHLK 29
>At3g49210.1 68416.m05378 expressed protein
Length = 518
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +3
Query: 279 QWASWSDSELLPASCAWVFPYLGIMQFNKQNVERAKSELLAALKVLDGHLLTRTF 443
+W +W + P S L ++ K+ ++R K+ L AAL + G + +TF
Sbjct: 361 RWGNWIGYIVFPFSIGLRDDPLQHLRRAKRIIDRKKNSLEAALTFVAGKFILKTF 415
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,397,422
Number of Sequences: 28952
Number of extensions: 318309
Number of successful extensions: 895
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 871
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 895
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1190791976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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