Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00315
         (678 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    27   0.19 
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    26   0.25 
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    24   1.3  
DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    23   2.3  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    23   2.3  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    22   4.0  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    22   4.0  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    22   4.0  
AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450 ...    22   4.0  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          22   5.3  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   7.0  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   7.0  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   7.0  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   7.0  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   7.0  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     21   7.0  

>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 26.6 bits (56), Expect = 0.19
 Identities = 15/49 (30%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
 Frame = -1

Query: 243 FVSYVRVLLSHADHHAL-MAGPSDDRGEHGARSIISCETGLAHTGAIVY 100
           + +Y      H DH  +    P+DDRG   A + +  ET   H  A  Y
Sbjct: 150 YSAYSSASRHHVDHQPVPYLTPADDRGRVAAAAAMVAETASFHHDAAGY 198


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 26.2 bits (55), Expect = 0.25
 Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
 Frame = +3

Query: 294 IVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA-PLNPKANR*VHRCRTMHFASRPVGP 470
           +VT+W + E+I++     +L V     PV+LT   PL       V      HF    V P
Sbjct: 158 VVTDWVNFERIYYKLTKKKLSVFFGNKPVILTVVLPLLACGVMVVTHITMAHFKIIQVVP 217

Query: 471 Y 473
           Y
Sbjct: 218 Y 218


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -3

Query: 178 RRSRGTRREEHHLLRNRP 125
           +   G R+  HHL++N+P
Sbjct: 78  KHKEGVRKVLHHLIKNKP 95


>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
           protein 16 protein.
          Length = 126

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -3

Query: 178 RRSRGTRREEHHLLRNRP 125
           +   G R+  HHL+ N+P
Sbjct: 78  KHKEGVRKVIHHLIENKP 95


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
           protein 9 protein.
          Length = 126

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -3

Query: 178 RRSRGTRREEHHLLRNRP 125
           +   G R+  HHL+ N+P
Sbjct: 78  KHKEGVRKVIHHLIENKP 95


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 9/24 (37%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = -3

Query: 139 LRNRP-CTYRSHCLLPTRQLPRRT 71
           ++ +P C+  + C L TR+LP  T
Sbjct: 477 IKGQPYCSLPNSCALTTRELPGET 500


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 9/24 (37%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = -3

Query: 139 LRNRP-CTYRSHCLLPTRQLPRRT 71
           ++ +P C+  + C L TR+LP  T
Sbjct: 484 IKGQPYCSLPNSCALTTRELPGET 507


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -2

Query: 113 EPLSTTNAATSSSHILN*YSIIK*VTSRYVD 21
           E  +T + A +SS I N YS+I      +VD
Sbjct: 86  EMRATLSPAFTSSKIKNMYSLISECAENFVD 116


>AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 127

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 263 PDPQIPHRTRNRH 301
           PD  +P RT NRH
Sbjct: 110 PDNFLPERTANRH 122


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -2

Query: 404 VEGSLSEQDGVFLGGDTQLIVEGMMPNL 321
           V G + E  GV+ G + Q++     PNL
Sbjct: 262 VGGKVDETAGVYSGWEGQVLENMPQPNL 289


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = -1

Query: 378 RGVPRGRHAAHCRRYDAKSSP 316
           RG P    AA C +   KS P
Sbjct: 33  RGTPLAMLAAQCNKLSNKSPP 53


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -2

Query: 332 MPNLLHVIPVSDDSVFD 282
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -2

Query: 332 MPNLLHVIPVSDDSVFD 282
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -2

Query: 332 MPNLLHVIPVSDDSVFD 282
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -2

Query: 332 MPNLLHVIPVSDDSVFD 282
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -2

Query: 443 HSPASMNSPVGLGVEGSLSEQDGV 372
           HSP    S  G G  GSL + D +
Sbjct: 210 HSPVLNLSKSGGGSAGSLEDDDNI 233


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,931
Number of Sequences: 336
Number of extensions: 4149
Number of successful extensions: 21
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)