Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00315
(678 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 126 2e-29
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 126 2e-29
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 125 2e-29
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 125 2e-29
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 125 3e-29
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 125 3e-29
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 125 3e-29
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 125 3e-29
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 125 3e-29
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 118 3e-27
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 113 1e-25
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 112 2e-25
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 79 3e-15
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 66 2e-11
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 58 4e-09
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 57 1e-08
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 45 4e-05
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 44 7e-05
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 44 9e-05
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.099
At2g18520.1 68415.m02158 pentatricopeptide (PPR) repeat-containi... 31 0.93
At3g07870.1 68416.m00962 F-box family protein contains F-box dom... 26 2.0
At3g12650.1 68416.m01575 expressed protein 29 2.8
At3g19430.1 68416.m02464 late embryogenesis abundant protein-rel... 28 4.9
At4g30070.1 68417.m04277 plant defensin-fusion protein, putative... 28 6.5
At2g21330.1 68415.m02538 fructose-bisphosphate aldolase, putativ... 28 6.5
At1g16690.2 68414.m01999 transcription factor-related similar to... 28 6.5
At1g16690.1 68414.m01998 transcription factor-related similar to... 28 6.5
At5g40760.1 68418.m04946 glucose-6-phosphate 1-dehydrogenase / G... 27 8.6
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 8.6
At4g01535.1 68417.m00199 hypothetical protein 27 8.6
At2g35640.1 68415.m04371 hydroxyproline-rich glycoprotein family... 27 8.6
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 126 bits (303), Expect = 2e-29
Identities = 54/56 (96%), Positives = 56/56 (100%)
Frame = +3
Query: 252 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 419
+RGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR
Sbjct: 63 KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 118
Score = 110 bits (265), Expect = 7e-25
Identities = 50/59 (84%), Positives = 54/59 (91%)
Frame = +1
Query: 79 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 255
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSK
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 67.7 bits (158), Expect = 7e-12
Identities = 32/33 (96%), Positives = 32/33 (96%)
Frame = +1
Query: 508 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRT 606
REKMTQIMFETFN PAMYVAIQAVLSLYASGRT
Sbjct: 118 REKMTQIMFETFNVPAMYVAIQAVLSLYASGRT 150
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 126 bits (303), Expect = 2e-29
Identities = 54/56 (96%), Positives = 56/56 (100%)
Frame = +3
Query: 252 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 419
+RGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR
Sbjct: 63 KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 118
Score = 110 bits (265), Expect = 7e-25
Identities = 50/59 (84%), Positives = 54/59 (91%)
Frame = +1
Query: 79 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 255
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSK
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 69.7 bits (163), Expect = 2e-12
Identities = 33/33 (100%), Positives = 33/33 (100%)
Frame = +1
Query: 508 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRT 606
REKMTQIMFETFNTPAMYVAIQAVLSLYASGRT
Sbjct: 118 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRT 150
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 125 bits (302), Expect = 2e-29
Identities = 54/56 (96%), Positives = 55/56 (98%)
Frame = +3
Query: 252 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 419
+RGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR
Sbjct: 63 KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 118
Score = 110 bits (265), Expect = 7e-25
Identities = 50/59 (84%), Positives = 54/59 (91%)
Frame = +1
Query: 79 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 255
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSK
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 69.7 bits (163), Expect = 2e-12
Identities = 33/33 (100%), Positives = 33/33 (100%)
Frame = +1
Query: 508 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRT 606
REKMTQIMFETFNTPAMYVAIQAVLSLYASGRT
Sbjct: 118 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRT 150
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 125 bits (302), Expect = 2e-29
Identities = 54/56 (96%), Positives = 55/56 (98%)
Frame = +3
Query: 252 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 419
+RGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR
Sbjct: 63 KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 118
Score = 110 bits (265), Expect = 7e-25
Identities = 50/59 (84%), Positives = 54/59 (91%)
Frame = +1
Query: 79 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 255
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSK
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 69.7 bits (163), Expect = 2e-12
Identities = 33/33 (100%), Positives = 33/33 (100%)
Frame = +1
Query: 508 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRT 606
REKMTQIMFETFNTPAMYVAIQAVLSLYASGRT
Sbjct: 118 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRT 150
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 125 bits (301), Expect = 3e-29
Identities = 53/56 (94%), Positives = 55/56 (98%)
Frame = +3
Query: 252 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 419
+RGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANR
Sbjct: 63 KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANR 118
Score = 110 bits (265), Expect = 7e-25
Identities = 50/59 (84%), Positives = 54/59 (91%)
Frame = +1
Query: 79 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 255
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSK
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 67.7 bits (158), Expect = 7e-12
Identities = 32/33 (96%), Positives = 32/33 (96%)
Frame = +1
Query: 508 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRT 606
REKMTQIMFETFN PAMYVAIQAVLSLYASGRT
Sbjct: 118 REKMTQIMFETFNAPAMYVAIQAVLSLYASGRT 150
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 125 bits (301), Expect = 3e-29
Identities = 52/56 (92%), Positives = 56/56 (100%)
Frame = +3
Query: 252 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 419
+RGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANR
Sbjct: 63 KRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANR 118
Score = 106 bits (254), Expect = 2e-23
Identities = 46/59 (77%), Positives = 53/59 (89%)
Frame = +1
Query: 79 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 255
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSK
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
Score = 68.1 bits (159), Expect = 5e-12
Identities = 32/33 (96%), Positives = 33/33 (100%)
Frame = +1
Query: 508 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRT 606
REKMTQIMFETFN+PAMYVAIQAVLSLYASGRT
Sbjct: 118 REKMTQIMFETFNSPAMYVAIQAVLSLYASGRT 150
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 125 bits (301), Expect = 3e-29
Identities = 52/56 (92%), Positives = 56/56 (100%)
Frame = +3
Query: 252 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 419
+RGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANR
Sbjct: 63 KRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANR 118
Score = 106 bits (254), Expect = 2e-23
Identities = 46/59 (77%), Positives = 53/59 (89%)
Frame = +1
Query: 79 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 255
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSK
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
Score = 68.1 bits (159), Expect = 5e-12
Identities = 32/33 (96%), Positives = 33/33 (100%)
Frame = +1
Query: 508 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRT 606
REKMTQIMFETFN+PAMYVAIQAVLSLYASGRT
Sbjct: 118 REKMTQIMFETFNSPAMYVAIQAVLSLYASGRT 150
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 125 bits (301), Expect = 3e-29
Identities = 53/56 (94%), Positives = 55/56 (98%)
Frame = +3
Query: 252 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 419
+RGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANR
Sbjct: 63 KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANR 118
Score = 110 bits (265), Expect = 7e-25
Identities = 50/59 (84%), Positives = 54/59 (91%)
Frame = +1
Query: 79 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 255
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSK
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 67.7 bits (158), Expect = 7e-12
Identities = 32/33 (96%), Positives = 32/33 (96%)
Frame = +1
Query: 508 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRT 606
REKMTQIMFETFN PAMYVAIQAVLSLYASGRT
Sbjct: 118 REKMTQIMFETFNAPAMYVAIQAVLSLYASGRT 150
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 125 bits (301), Expect = 3e-29
Identities = 52/56 (92%), Positives = 56/56 (100%)
Frame = +3
Query: 252 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 419
+RGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANR
Sbjct: 63 KRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANR 118
Score = 106 bits (254), Expect = 2e-23
Identities = 46/59 (77%), Positives = 53/59 (89%)
Frame = +1
Query: 79 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 255
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSK
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
Score = 68.1 bits (159), Expect = 5e-12
Identities = 32/33 (96%), Positives = 33/33 (100%)
Frame = +1
Query: 508 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRT 606
REKMTQIMFETFN+PAMYVAIQAVLSLYASGRT
Sbjct: 118 REKMTQIMFETFNSPAMYVAIQAVLSLYASGRT 150
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 118 bits (285), Expect = 3e-27
Identities = 48/56 (85%), Positives = 54/56 (96%)
Frame = +3
Query: 252 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 419
+RGIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNPK NR
Sbjct: 64 RRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNR 119
Score = 102 bits (245), Expect = 2e-22
Identities = 44/59 (74%), Positives = 54/59 (91%)
Frame = +1
Query: 79 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 255
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VGDEAQ++
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQAR 64
Score = 57.6 bits (133), Expect = 7e-09
Identities = 26/33 (78%), Positives = 30/33 (90%)
Frame = +1
Query: 508 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRT 606
REKMTQIMFE+F P+MY+ IQAVLSLY+SGRT
Sbjct: 119 REKMTQIMFESFAFPSMYIGIQAVLSLYSSGRT 151
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 113 bits (271), Expect = 1e-25
Identities = 47/54 (87%), Positives = 53/54 (98%)
Frame = +3
Query: 258 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 419
GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPVLLTEAPLNPKA+R
Sbjct: 20 GILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLNPKADR 73
Score = 56.4 bits (130), Expect = 2e-08
Identities = 25/33 (75%), Positives = 29/33 (87%)
Frame = +1
Query: 508 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRT 606
REKMTQIMFETF P+MY+ +QA LSL+ASGRT
Sbjct: 73 REKMTQIMFETFAVPSMYIGMQAALSLHASGRT 105
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 112 bits (270), Expect = 2e-25
Identities = 53/74 (71%), Positives = 56/74 (75%)
Frame = +3
Query: 198 RDGRHGTEGLVRRRRSTEQRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 377
RDG + E V R ILTLK P+EHGIV NWDDMEKIWH+TFYNELRV PEEHP
Sbjct: 35 RDGLNPNESYVGEEGHAN-RDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93
Query: 378 VLLTEAPLNPKANR 419
VLLTEAP NPKANR
Sbjct: 94 VLLTEAPYNPKANR 107
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/53 (50%), Positives = 36/53 (67%)
Frame = +1
Query: 94 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 252
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVG+E +
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHA 51
Score = 56.8 bits (131), Expect = 1e-08
Identities = 25/33 (75%), Positives = 31/33 (93%)
Frame = +1
Query: 508 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRT 606
REKMTQIMFE+F+ PAMYV++Q+VL LY+SGRT
Sbjct: 107 REKMTQIMFESFDVPAMYVSMQSVLYLYSSGRT 139
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 79.0 bits (186), Expect = 3e-15
Identities = 31/58 (53%), Positives = 41/58 (70%)
Frame = +3
Query: 246 TEQRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 419
+E R L + YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ PLNP NR
Sbjct: 60 SELRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNR 117
Score = 49.2 bits (112), Expect = 2e-06
Identities = 23/51 (45%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Frame = +1
Query: 94 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGD 240
+V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG+
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGE 57
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/31 (54%), Positives = 23/31 (74%)
Frame = +1
Query: 508 REKMTQIMFETFNTPAMYVAIQAVLSLYASG 600
REKM + MFE +N +++ IQAVL+LYA G
Sbjct: 117 REKMIETMFEKYNFAGVFIQIQAVLTLYAQG 147
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 66.5 bits (155), Expect = 2e-11
Identities = 32/69 (46%), Positives = 40/69 (57%)
Frame = +3
Query: 213 GTEGLVRRRRSTEQRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 392
G E L + R S+ L YPIEHG V +WD ME+ W +N LR PE+H LLTE
Sbjct: 71 GDEALAKSRSSSTHN----LHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTE 126
Query: 393 APLNPKANR 419
+PL P +R
Sbjct: 127 SPLTPPESR 135
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/37 (48%), Positives = 26/37 (70%)
Frame = +1
Query: 508 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTPVSC 618
RE +I+FETFN P +Y+A+ +VL+L A+G T C
Sbjct: 135 REYTGEILFETFNVPGLYIAVNSVLAL-AAGYTTSKC 170
Score = 35.9 bits (79), Expect = 0.025
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +1
Query: 91 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 177
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 58.4 bits (135), Expect = 4e-09
Identities = 24/56 (42%), Positives = 35/56 (62%)
Frame = +3
Query: 252 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 419
+R + + P + GIVT+WD ++ +W H F N L + P EHP+LL E PLN + R
Sbjct: 79 RRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLAEPPLNSQQQR 134
Score = 57.2 bits (132), Expect = 9e-09
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = +1
Query: 79 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 180
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 56.8 bits (131), Expect = 1e-08
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +1
Query: 79 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 180
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
Score = 56.8 bits (131), Expect = 1e-08
Identities = 23/47 (48%), Positives = 32/47 (68%)
Frame = +3
Query: 279 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 419
PI+ GIV++WD ++ IW H F + L + P EHP+LL E PLN + R
Sbjct: 94 PIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLNTQQQR 140
Score = 37.1 bits (82), Expect = 0.011
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Frame = +1
Query: 508 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTP---VSCWTPATCLHTCH 651
REK ++MFE + PA+++A VL+ +A+GR V C +T + H
Sbjct: 140 REKAAELMFEKYKVPALFMAKNPVLTSFATGRATSLVVDCGGGSTTISPVH 190
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 45.2 bits (102), Expect = 4e-05
Identities = 20/32 (62%), Positives = 24/32 (75%)
Frame = +1
Query: 508 REKMTQIMFETFNTPAMYVAIQAVLSLYASGR 603
RE++ Q+MFETFN Y + QAVLSLYA GR
Sbjct: 104 REQLVQLMFETFNVSGFYASEQAVLSLYAVGR 135
Score = 32.7 bits (71), Expect = 0.23
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +3
Query: 279 PIEHGIVTNWDDMEKIWHHTFYNELR-VAPEEHPVLLTEAPLNPKANR 419
PIE G++ +WD ME + + Y L E +L T+ PKA R
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIR 104
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 91 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGR 183
ALVVD GS KAG A D +P + PS + R
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR 34
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 44.4 bits (100), Expect = 7e-05
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +3
Query: 270 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN-PKANR 419
++ PI+ G + N D +IW H F + L +AP +LLTEAPL+ P R
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQR 111
Score = 32.7 bits (71), Expect = 0.23
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1
Query: 94 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 186
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 44.0 bits (99), Expect = 9e-05
Identities = 21/49 (42%), Positives = 31/49 (63%)
Frame = +1
Query: 94 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD 240
+V+DNG+ + G+AG+ PR VF +IV RPRH+ G+ + VGD
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGD 66
Score = 28.3 bits (60), Expect = 4.9
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +1
Query: 508 REKMTQIMFETFNTPAMYVAIQAVLS 585
R KM +++FET+ PA+ + A S
Sbjct: 132 RSKMAELLFETYGVPAVAFGVDAAFS 157
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.9 bits (74), Expect = 0.099
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -2
Query: 215 PMPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 78
P P I P RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At2g18520.1 68415.m02158 pentatricopeptide (PPR) repeat-containing
protein low similarity to fertility restorer [Petunia x
hybrida] GI:22128587; contains Pfam profile PF01535: PPR
repeat
Length = 418
Score = 30.7 bits (66), Expect = 0.93
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +3
Query: 189 PSGRDGRHGTEGLVRRRRSTEQRGILTL-KYPIEHGIVTNWDDMEK 323
P + +H TEGLV+ R + RG+ + K +VT W +E+
Sbjct: 342 PDFKTCKHLTEGLVKNNRMEDARGVARIVKKKFPPRLVTEWKKLEE 387
>At3g07870.1 68416.m00962 F-box family protein contains F-box domain
Pfam:PF00646
Length = 417
Score = 26.2 bits (55), Expect(2) = 2.0
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = -2
Query: 191 WRGLPTIEGNTARGASSPAKPA--LHIPEPL 105
WR + T G + +SSP KP LH P+
Sbjct: 55 WRSVLTQHGRLSSSSSSPTKPCLLLHCDSPI 85
Score = 21.8 bits (44), Expect(2) = 2.0
Identities = 8/27 (29%), Positives = 17/27 (62%)
Frame = -2
Query: 380 DGVFLGGDTQLIVEGMMPNLLHVIPVS 300
DGV +GG + + E ++ ++ +P+S
Sbjct: 17 DGVGVGGGLESLPEDIIADIFSRLPIS 43
>At3g12650.1 68416.m01575 expressed protein
Length = 238
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = -2
Query: 404 VEGSLSEQDGVFLGGDTQLIVEGMMPNL 321
+EG E+D LG +T+ ++EGMM N+
Sbjct: 99 IEGPTVERDLSALGNETRQVLEGMMKNM 126
>At3g19430.1 68416.m02464 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein [Picea glauca] GI:1350543
Length = 559
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +1
Query: 334 IPSTMSCVSPPRNTPSCSLRLPSTPRPT 417
+PS VSPP TP+ S+ P+ P PT
Sbjct: 144 VPSPTPPVSPPPPTPTPSVPSPTPPVPT 171
>At4g30070.1 68417.m04277 plant defensin-fusion protein, putative
contains a C-terminal plant defensin domain, personal
communication, Bart Thomma
(Bart.Thomma@agr.kuleuven.ac.be)
Length = 129
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -3
Query: 268 VRIPLCSVLRLLRTSPSVPCRPSRPDGGA 182
V +PLC + PS P P + DGGA
Sbjct: 59 VGVPLCKCYYECESPPSPPAPPKKCDGGA 87
>At2g21330.1 68415.m02538 fructose-bisphosphate aldolase, putative
strong similarity to plastidic fructose-bisphosphate
aldolase (EC 4.1.2.13) from Nicotiana paniculata
(NPALDP1) [GI:4827251], Oryza sativa, PIR2:T02057
[SP|Q40677]
Length = 399
Score = 27.9 bits (59), Expect = 6.5
Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 5/57 (8%)
Frame = +3
Query: 189 PSGRDGRHGTEGLVRRRRSTEQRGILTLKYPI-----EHGIVTNWDDMEKIWHHTFY 344
PS + GL R ++ G++ + P EHGI +D EK+W F+
Sbjct: 197 PSALAVKEAAWGLARYAAISQDSGLVPIVEPEIMLDGEHGIDRTYDVAEKVWAEVFF 253
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 27.9 bits (59), Expect = 6.5
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = +3
Query: 264 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 365
L++KY + H I + W + +IW L+ P
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP 211
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 27.9 bits (59), Expect = 6.5
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = +3
Query: 264 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 365
L++KY + H I + W + +IW L+ P
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP 211
>At5g40760.1 68418.m04946 glucose-6-phosphate 1-dehydrogenase / G6PD
(ACG12) idential to glucose-6-phosphate 1-dehydrogenase
(acg12) [Arabidopsis thaliana] GI:5732197
Length = 515
Score = 27.5 bits (58), Expect = 8.6
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = -2
Query: 323 LLHVIPVSDDSVFDGVFEG---QDTSLLCASSPTYESFCPMPTITP*WRGLPTI 171
L V+P+SDD V G +EG DT +++PT+ + + W G+P I
Sbjct: 303 LQSVVPISDDEVVLGQYEGYRDDDTVPNDSNTPTFATTI-LRIHNERWEGVPFI 355
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -2
Query: 191 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 69
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At4g01535.1 68417.m00199 hypothetical protein
Length = 137
Score = 27.5 bits (58), Expect = 8.6
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +3
Query: 27 VPTCHLFNNTILIQDVRRGSCRVGSRQWL 113
+ + +L NT +++D + +C GS+ WL
Sbjct: 13 IESLNLLKNTTVLEDQGKWNCEFGSKLWL 41
>At2g35640.1 68415.m04371 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 340
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 334 IPSTMSCVSPPRNTPSCSLRLPSTPRP 414
IP+T+ PP S SL LPS P+P
Sbjct: 187 IPTTIVLSLPPPPPQSLSLSLPSPPQP 213
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,977,555
Number of Sequences: 28952
Number of extensions: 411964
Number of successful extensions: 1312
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1310
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1428369392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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