Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00314
(676 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39648-6|AAM15602.1| 557|Caenorhabditis elegans Abnormal dauer ... 31 0.75
U39648-5|AAK39293.1| 572|Caenorhabditis elegans Abnormal dauer ... 31 0.75
AF407572-1|AAL65132.1| 557|Caenorhabditis elegans DAF-9 isoform... 31 0.75
Z69885-4|CAA93757.1| 208|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z83120-6|CAB76722.1| 809|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical pr... 27 9.2
AY835433-1|AAX37360.1| 331|Caenorhabditis elegans bZIP transcri... 27 9.2
AY835432-1|AAX37359.1| 467|Caenorhabditis elegans bZIP transcri... 27 9.2
AF016440-2|AAB65905.2| 331|Caenorhabditis elegans Abnormal ever... 27 9.2
AF016440-1|ABA54419.1| 467|Caenorhabditis elegans Abnormal ever... 27 9.2
>U39648-6|AAM15602.1| 557|Caenorhabditis elegans Abnormal dauer
formation protein9, isoform b protein.
Length = 557
Score = 31.1 bits (67), Expect = 0.75
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 1 AVLASSPFVTSQPTEELLREFETVYGAVELTHLTPP 108
AV +SPFV E+ E+ +YG + HL+ P
Sbjct: 100 AVFGNSPFVNILTPEQTFLEYREIYGPIFTLHLSQP 135
>U39648-5|AAK39293.1| 572|Caenorhabditis elegans Abnormal dauer
formation protein9, isoform a protein.
Length = 572
Score = 31.1 bits (67), Expect = 0.75
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 1 AVLASSPFVTSQPTEELLREFETVYGAVELTHLTPP 108
AV +SPFV E+ E+ +YG + HL+ P
Sbjct: 115 AVFGNSPFVNILTPEQTFLEYREIYGPIFTLHLSQP 150
>AF407572-1|AAL65132.1| 557|Caenorhabditis elegans DAF-9 isoform A
protein.
Length = 557
Score = 31.1 bits (67), Expect = 0.75
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 1 AVLASSPFVTSQPTEELLREFETVYGAVELTHLTPP 108
AV +SPFV E+ E+ +YG + HL+ P
Sbjct: 100 AVFGNSPFVNILTPEQTFLEYREIYGPIFTLHLSQP 135
>Z69885-4|CAA93757.1| 208|Caenorhabditis elegans Hypothetical
protein T04C10.4 protein.
Length = 208
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = +3
Query: 444 DRRSRKKEQNKNAATRYRQ 500
+++ RKK QN+ AATRYR+
Sbjct: 139 EKKERKKAQNRLAATRYRE 157
>Z83120-6|CAB76722.1| 809|Caenorhabditis elegans Hypothetical
protein R06A4.9 protein.
Length = 809
Score = 28.3 bits (60), Expect = 5.3
Identities = 22/84 (26%), Positives = 34/84 (40%), Gaps = 5/84 (5%)
Frame = -2
Query: 456 VNDGHLQ-NASSNVTVRTSPRRSMRNAAMMVVKNVERH*HYYWNVAEMPVERLGDGPVPR 280
+N G ++ N NVT+ P S + + N H H + + + +GDGP R
Sbjct: 1 MNGGMMRGNQMPNVTLTIQPSTSSMQNSQPRIMNNHHHPHNRFQREHVMPDVMGDGPGRR 60
Query: 279 RRPSHTRNLRQLVY----RNRCHN 220
R + R + Y N C N
Sbjct: 61 LRKNVANVRRHVDYVSTVLNHCEN 84
>Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical
protein T14G8.3b protein.
Length = 905
Score = 27.5 bits (58), Expect = 9.2
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1
Query: 559 TELGEKCSDLQREIRYL 609
+E+ EK DL+RE+RYL
Sbjct: 808 SEIAEKARDLEREVRYL 824
>Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical
protein T14G8.3a protein.
Length = 921
Score = 27.5 bits (58), Expect = 9.2
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1
Query: 559 TELGEKCSDLQREIRYL 609
+E+ EK DL+RE+RYL
Sbjct: 824 SEIAEKARDLEREVRYL 840
>AY835433-1|AAX37360.1| 331|Caenorhabditis elegans bZIP
transcription factor FOS-1b protein.
Length = 331
Score = 27.5 bits (58), Expect = 9.2
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +3
Query: 441 DDRRSRKKEQNKNAATRYRQ 500
DD+R +++++NK AA R RQ
Sbjct: 27 DDKRLKRRQRNKEAAARCRQ 46
>AY835432-1|AAX37359.1| 467|Caenorhabditis elegans bZIP
transcription factor FOS-1a protein.
Length = 467
Score = 27.5 bits (58), Expect = 9.2
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +3
Query: 441 DDRRSRKKEQNKNAATRYRQ 500
DD+R +++++NK AA R RQ
Sbjct: 163 DDKRLKRRQRNKEAAARCRQ 182
>AF016440-2|AAB65905.2| 331|Caenorhabditis elegans Abnormal
eversion of vulva protein5, isoform a protein.
Length = 331
Score = 27.5 bits (58), Expect = 9.2
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +3
Query: 441 DDRRSRKKEQNKNAATRYRQ 500
DD+R +++++NK AA R RQ
Sbjct: 27 DDKRLKRRQRNKEAAARCRQ 46
>AF016440-1|ABA54419.1| 467|Caenorhabditis elegans Abnormal
eversion of vulva protein5, isoform b protein.
Length = 467
Score = 27.5 bits (58), Expect = 9.2
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +3
Query: 441 DDRRSRKKEQNKNAATRYRQ 500
DD+R +++++NK AA R RQ
Sbjct: 163 DDKRLKRRQRNKEAAARCRQ 182
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,510,530
Number of Sequences: 27780
Number of extensions: 184215
Number of successful extensions: 739
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 739
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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