Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00310
         (502 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    24   0.88 
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    23   1.2  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    23   1.2  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    23   1.2  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    23   1.2  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    23   2.0  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    23   2.0  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    22   2.7  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    22   2.7  

>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 23.8 bits (49), Expect = 0.88
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = +3

Query: 411 NKCIVTACKMFKIYRILLINYL 476
           +K  +TAC++FKI   L+++ L
Sbjct: 197 DKLEITACRLFKIDNSLILDLL 218


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 19/71 (26%), Positives = 28/71 (39%)
 Frame = -3

Query: 344 IPTCSAVPQEYNQQIC*CQT*YMDSSRSIGYLCQVFLE*LIMQLSVGIILVFPVMFFDET 165
           I TCS V  E  + +  C   Y D         +  L  L  Q++  I  +    FFD +
Sbjct: 275 IMTCSGVHSESQKLVGVCYE-YQDRFSDESKKRRELLR-LAQQVNANIAQITAANFFDIS 332

Query: 164 LEQFFGLIEVI 132
              F G++  I
Sbjct: 333 RSTFLGILATI 343


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +3

Query: 408 RNKCIVTACKMFKIYRILLIN 470
           +NK  +TAC++F I   LL +
Sbjct: 252 QNKLEITACRLFSIDNALLFS 272


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -3

Query: 263 SIGYLCQVFLE*LIMQLSVGIILVFPVMFF 174
           S GYL       + M LS+G  LV P + F
Sbjct: 542 SFGYLISCVSRSVSMALSIGPPLVIPFLLF 571


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -3

Query: 263 SIGYLCQVFLE*LIMQLSVGIILVFPVMFF 174
           S GYL       + M LS+G  LV P + F
Sbjct: 542 SFGYLISCVSRSVSMALSIGPPLVIPFLLF 571


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +2

Query: 266 EKNPYTTFGINKFADYTP 319
           ++NPY + G+   A Y+P
Sbjct: 18  DQNPYPSIGVESSAFYSP 35


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 411 NKCIVTACKMFKIYRILL 464
           NK  +TAC++F I   LL
Sbjct: 337 NKIEITACRLFNIDNALL 354


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 408 RNKCIVTACKMFKIYRILLIN 470
           +N+  +TACK F I   LL +
Sbjct: 349 QNELEITACKFFSIDNALLFS 369



 Score = 21.4 bits (43), Expect = 4.7
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 423 VTACKMFKIYRILLIN 470
           +TACK F I   LL++
Sbjct: 407 ITACKFFSIDNALLLS 422


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 9/18 (50%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
 Frame = -2

Query: 171 RNSRTILWLD*GHN-VSE 121
           RN++ + WLD  HN +SE
Sbjct: 293 RNTKKLQWLDTSHNRISE 310


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,046
Number of Sequences: 336
Number of extensions: 2005
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11839801
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)