Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00310
         (502 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL021497-4|CAA16407.1|  386|Caenorhabditis elegans Hypothetical ...    33   0.12 
Z70750-3|CAA94738.1|  374|Caenorhabditis elegans Hypothetical pr...    30   1.1  
Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p...    29   2.5  
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p...    29   2.5  
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p...    29   2.5  
Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr...    29   2.5  
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr...    29   2.5  
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr...    29   2.5  
X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein.     29   2.5  
Z81525-5|CAB54242.1|  168|Caenorhabditis elegans Hypothetical pr...    28   3.3  
Z81113-2|CAB03279.1|  510|Caenorhabditis elegans Hypothetical pr...    28   4.4  
U39651-8|AAA80399.1|  250|Caenorhabditis elegans Hypothetical pr...    28   4.4  
AL021497-1|CAA16404.1|  382|Caenorhabditis elegans Hypothetical ...    28   4.4  
U64859-10|AAC69091.2|  383|Caenorhabditis elegans Hypothetical p...    27   7.6  
U47144-5|AAB52621.2| 1410|Caenorhabditis elegans Hypothetical pr...    27   7.6  

>AL021497-4|CAA16407.1|  386|Caenorhabditis elegans Hypothetical
           protein Y51A2D.8 protein.
          Length = 386

 Score = 33.1 bits (72), Expect = 0.12
 Identities = 11/28 (39%), Positives = 21/28 (75%)
 Frame = +3

Query: 159 FESFVKEHNREYKDDADRELHYQSFKKN 242
           FE F K++NR+YKD+++ +  + +F K+
Sbjct: 43  FEDFKKKYNRKYKDESENQQRFNNFVKS 70



 Score = 28.7 bits (61), Expect = 2.5
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +2

Query: 281 TTFGINKFADYTPEEQQSRLGLRLPAKKT 367
           T FGINKF+D +  E   RL   +P+  T
Sbjct: 88  TQFGINKFSDLSTAEFHGRLSNVVPSNNT 116


>Z70750-3|CAA94738.1|  374|Caenorhabditis elegans Hypothetical
           protein C50F4.3 protein.
          Length = 374

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 9/25 (36%), Positives = 17/25 (68%)
 Frame = +3

Query: 159 FESFVKEHNREYKDDADRELHYQSF 233
           FE F+ ++ R YKD+ +++  +Q F
Sbjct: 47  FEDFIVKYKRNYKDEIEKKFRFQQF 71


>Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical
            protein ZK617.1c protein.
          Length = 6629

 Score = 28.7 bits (61), Expect = 2.5
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = -2

Query: 252  SLPSFS*MIDNAALCRHHPC-IPCYVL*RNSRTILWLD*GHNVSED 118
            S P F+  + N  + ++H C + C +    + TI W+  GH V ED
Sbjct: 6177 SAPFFTFHLRNRLIQKNHQCKLTCSLQGNPNPTIEWMKDGHPVDED 6222


>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
            protein ZK617.1b protein.
          Length = 7158

 Score = 28.7 bits (61), Expect = 2.5
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = -2

Query: 252  SLPSFS*MIDNAALCRHHPC-IPCYVL*RNSRTILWLD*GHNVSED 118
            S P F+  + N  + ++H C + C +    + TI W+  GH V ED
Sbjct: 6706 SAPFFTFHLRNRLIQKNHQCKLTCSLQGNPNPTIEWMKDGHPVDED 6751


>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
            protein ZK617.1a protein.
          Length = 6839

 Score = 28.7 bits (61), Expect = 2.5
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = -2

Query: 252  SLPSFS*MIDNAALCRHHPC-IPCYVL*RNSRTILWLD*GHNVSED 118
            S P F+  + N  + ++H C + C +    + TI W+  GH V ED
Sbjct: 6387 SAPFFTFHLRNRLIQKNHQCKLTCSLQGNPNPTIEWMKDGHPVDED 6432


>Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical protein
            ZK617.1c protein.
          Length = 6629

 Score = 28.7 bits (61), Expect = 2.5
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = -2

Query: 252  SLPSFS*MIDNAALCRHHPC-IPCYVL*RNSRTILWLD*GHNVSED 118
            S P F+  + N  + ++H C + C +    + TI W+  GH V ED
Sbjct: 6177 SAPFFTFHLRNRLIQKNHQCKLTCSLQGNPNPTIEWMKDGHPVDED 6222


>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical protein
            ZK617.1b protein.
          Length = 7158

 Score = 28.7 bits (61), Expect = 2.5
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = -2

Query: 252  SLPSFS*MIDNAALCRHHPC-IPCYVL*RNSRTILWLD*GHNVSED 118
            S P F+  + N  + ++H C + C +    + TI W+  GH V ED
Sbjct: 6706 SAPFFTFHLRNRLIQKNHQCKLTCSLQGNPNPTIEWMKDGHPVDED 6751


>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical protein
            ZK617.1a protein.
          Length = 6839

 Score = 28.7 bits (61), Expect = 2.5
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = -2

Query: 252  SLPSFS*MIDNAALCRHHPC-IPCYVL*RNSRTILWLD*GHNVSED 118
            S P F+  + N  + ++H C + C +    + TI W+  GH V ED
Sbjct: 6387 SAPFFTFHLRNRLIQKNHQCKLTCSLQGNPNPTIEWMKDGHPVDED 6432


>X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein.
          Length = 6048

 Score = 28.7 bits (61), Expect = 2.5
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = -2

Query: 252  SLPSFS*MIDNAALCRHHPC-IPCYVL*RNSRTILWLD*GHNVSED 118
            S P F+  + N  + ++H C + C +    + TI W+  GH V ED
Sbjct: 5596 SAPFFTFHLRNRLIQKNHQCKLTCSLQGNPNPTIEWMKDGHPVDED 5641


>Z81525-5|CAB54242.1|  168|Caenorhabditis elegans Hypothetical
           protein F33A8.7 protein.
          Length = 168

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 17/32 (53%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
 Frame = +3

Query: 57  NFVSVAL-LIATVVMASSA-DTDPPRHYDLNQ 146
           N+V V L L+ATVV+++ A DTD     DLNQ
Sbjct: 7   NYVLVLLVLLATVVLSNQAQDTDVQHRKDLNQ 38


>Z81113-2|CAB03279.1|  510|Caenorhabditis elegans Hypothetical
           protein T03F6.2 protein.
          Length = 510

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +3

Query: 129 HYDLNQAKELFES-FVKEHNREYKDDADRELHYQ 227
           HYD+ QA   FES  + + N++++D   +E + Q
Sbjct: 192 HYDITQASNRFESRQIDQENKKFRDVGKQERNEQ 225


>U39651-8|AAA80399.1|  250|Caenorhabditis elegans Hypothetical
           protein ZK470.6 protein.
          Length = 250

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -2

Query: 276 GFFSFNWLSLPSFS*MIDNAALCRHHPCIP 187
           G+F   W+ LPSF  ++ N  +C  +P  P
Sbjct: 163 GWFGCGWMFLPSFG-LLSNYDMCDDNPSCP 191


>AL021497-1|CAA16404.1|  382|Caenorhabditis elegans Hypothetical
           protein Y51A2D.1 protein.
          Length = 382

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +3

Query: 159 FESFVKEHNREYKDDADRELHYQSFKKN 242
           F  F K+ +R YK +A+ +L  Q+F K+
Sbjct: 44  FVEFKKKFSRTYKSEAENQLRLQNFVKS 71


>U64859-10|AAC69091.2|  383|Caenorhabditis elegans Hypothetical
           protein R09F10.1 protein.
          Length = 383

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 10/34 (29%), Positives = 20/34 (58%)
 Frame = +3

Query: 150 KELFESFVKEHNREYKDDADRELHYQSFKKNLAE 251
           +++F  F+ + +R+Y    + E  YQ F +N+ E
Sbjct: 79  EQMFNDFILKFDRKYTSVEEFEYRYQIFLRNVIE 112


>U47144-5|AAB52621.2| 1410|Caenorhabditis elegans Hypothetical
           protein ZC53.4 protein.
          Length = 1410

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 12/46 (26%), Positives = 26/46 (56%)
 Frame = +3

Query: 363 RHKFSDFSLSECYSKRNKCIVTACKMFKIYRILLINYLNH*KKKKK 500
           ++ F++F + +C S+    I+   K+    + LLI  L+H  +K++
Sbjct: 443 KYAFTEFLIKKCESECKSIIINVSKISNKKKQLLIEQLHHDFQKER 488


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,401,639
Number of Sequences: 27780
Number of extensions: 198160
Number of successful extensions: 534
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 509
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 534
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 956602620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)