Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00299
         (419 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    24   0.52 
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    24   0.52 
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      21   6.4  

>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 24.2 bits (50), Expect = 0.52
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -1

Query: 269 WECCHSIPGPPPY 231
           WEC   IP PP Y
Sbjct: 27  WECLAPIPQPPAY 39


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 24.2 bits (50), Expect = 0.52
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -1

Query: 269 WECCHSIPGPPPY 231
           WEC   IP PP Y
Sbjct: 27  WECLAPIPQPPAY 39


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = +3

Query: 159 WQSPRCQPCCRERAE 203
           WQ  R   CC+E  E
Sbjct: 81  WQMERSCMCCQESGE 95


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,838
Number of Sequences: 336
Number of extensions: 1662
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9279512
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)