Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00299
         (419 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X99665-1|CAA67979.1|  106|Drosophila melanogaster mitochondrial ...    57   1e-08
BT001763-1|AAN71518.1|  106|Drosophila melanogaster RH08870p pro...    57   1e-08
AE014297-3317|AAF56127.1|  106|Drosophila melanogaster CG4412-PA...    57   1e-08
BT023609-1|AAY85009.1|  159|Drosophila melanogaster IP06415p pro...    50   2e-06
AE014296-920|AAF47954.1|  147|Drosophila melanogaster CG12027-PA...    50   2e-06
BT009937-1|AAQ22406.1| 1872|Drosophila melanogaster SD06328p pro...    27   7.7  
AE013599-3254|AAF46751.2| 1831|Drosophila melanogaster CG30263-P...    27   7.7  

>X99665-1|CAA67979.1|  106|Drosophila melanogaster mitochondrial
           ATPase couplingfactor 6 subunit protein.
          Length = 106

 Score = 56.8 bits (131), Expect = 1e-08
 Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
 Frame = +1

Query: 22  SKLVGLRAATTSMMVSRNLAAA--QKATDPIQQLFLDKIREYKXXSAGGKVPDASPAVXX 195
           S L G+R   T    +  + A    KA+DPIQQLFLDK+REYK  SAGGK+ D++P +  
Sbjct: 5   SLLSGMRVLRTEARRNFGIVAPALNKASDPIQQLFLDKVREYKQKSAGGKLVDSNPDIER 64

Query: 196 XXXXXXXXXXXQYG 237
                      Q+G
Sbjct: 65  ELKTELDRVAKQFG 78


>BT001763-1|AAN71518.1|  106|Drosophila melanogaster RH08870p
           protein.
          Length = 106

 Score = 56.8 bits (131), Expect = 1e-08
 Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
 Frame = +1

Query: 22  SKLVGLRAATTSMMVSRNLAAA--QKATDPIQQLFLDKIREYKXXSAGGKVPDASPAVXX 195
           S L G+R   T    +  + A    KA+DPIQQLFLDK+REYK  SAGGK+ D++P +  
Sbjct: 5   SLLSGMRVLRTEARRNFGIVAPALNKASDPIQQLFLDKVREYKQKSAGGKLVDSNPDIER 64

Query: 196 XXXXXXXXXXXQYG 237
                      Q+G
Sbjct: 65  ELKTELDRVAKQFG 78


>AE014297-3317|AAF56127.1|  106|Drosophila melanogaster CG4412-PA
           protein.
          Length = 106

 Score = 56.8 bits (131), Expect = 1e-08
 Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
 Frame = +1

Query: 22  SKLVGLRAATTSMMVSRNLAAA--QKATDPIQQLFLDKIREYKXXSAGGKVPDASPAVXX 195
           S L G+R   T    +  + A    KA+DPIQQLFLDK+REYK  SAGGK+ D++P +  
Sbjct: 5   SLLSGMRVLRTEARRNFGIVAPALNKASDPIQQLFLDKVREYKQKSAGGKLVDSNPDIER 64

Query: 196 XXXXXXXXXXXQYG 237
                      Q+G
Sbjct: 65  ELKTELDRVAKQFG 78


>BT023609-1|AAY85009.1|  159|Drosophila melanogaster IP06415p
           protein.
          Length = 159

 Score = 49.6 bits (113), Expect = 2e-06
 Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
 Frame = +1

Query: 55  SMMVSRNLA--AAQKATDPIQQLFLDKIREYKXXSAGGKVPDASPAVXXXXXXXXXXXXX 228
           S+++ R+++  A+ +  DPI Q+FLDK+REY+  S  GK  D  P               
Sbjct: 21  SLVLCRSVSNTASLRYKDPIYQIFLDKVREYRLKSPKGKPVDPGPEFEAELKEVTERLAL 80

Query: 229 QYGGGPGIE 255
           QYGGG G++
Sbjct: 81  QYGGGEGVD 89


>AE014296-920|AAF47954.1|  147|Drosophila melanogaster CG12027-PA
           protein.
          Length = 147

 Score = 49.6 bits (113), Expect = 2e-06
 Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
 Frame = +1

Query: 55  SMMVSRNLA--AAQKATDPIQQLFLDKIREYKXXSAGGKVPDASPAVXXXXXXXXXXXXX 228
           S+++ R+++  A+ +  DPI Q+FLDK+REY+  S  GK  D  P               
Sbjct: 9   SLVLCRSVSNTASLRYKDPIYQIFLDKVREYRLKSPKGKPVDPGPEFEAELKEVTERLAL 68

Query: 229 QYGGGPGIE 255
           QYGGG G++
Sbjct: 69  QYGGGEGVD 77


>BT009937-1|AAQ22406.1| 1872|Drosophila melanogaster SD06328p protein.
          Length = 1872

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 13/41 (31%), Positives = 18/41 (43%)
 Frame = +3

Query: 171  RCQPCCRERAEN*IRKA*EAVWRGSRNRMTAFPSLKFEEPK 293
            RC  CCR R  N   +    +W G+ +  TA      +E K
Sbjct: 1511 RCSRCCRRRERNESAEDQPVLWSGNSSATTATNVQVIDETK 1551


>AE013599-3254|AAF46751.2| 1831|Drosophila melanogaster CG30263-PA
            protein.
          Length = 1831

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 13/41 (31%), Positives = 18/41 (43%)
 Frame = +3

Query: 171  RCQPCCRERAEN*IRKA*EAVWRGSRNRMTAFPSLKFEEPK 293
            RC  CCR R  N   +    +W G+ +  TA      +E K
Sbjct: 1509 RCSRCCRRRERNESAEDQPVLWSGNSSATTATNVQVIDETK 1549


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,098,436
Number of Sequences: 53049
Number of extensions: 353796
Number of successful extensions: 530
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 510
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 530
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1271883306
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)