Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00299
         (419 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    21   5.6  
DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated...    21   7.5  
AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    21   7.5  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          20   9.9  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          20   9.9  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          20   9.9  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          20   9.9  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          20   9.9  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          20   9.9  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    20   9.9  

>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.0 bits (42), Expect = 5.6
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = -1

Query: 332 SLLGGGLFINGVQLRFFKFQRWECCHSIPGPP 237
           SLL   L +  +  R  +    E    IPGPP
Sbjct: 17  SLLIPALILYFIYFRISRRHLLELAEKIPGPP 48


>DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 391

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = -3

Query: 306 QWGPA*VLQISEMGMLSFDSGTPSI 232
           +WG   V    E+ +L +D G P +
Sbjct: 147 RWGTGAVTVNPELKLLQYDIGKPVV 171


>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
           protein precursor protein.
          Length = 153

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = +3

Query: 159 WQSPRCQPCCRERAE 203
           WQ  R   CC+E  E
Sbjct: 69  WQMERSCMCCQESGE 83


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -1

Query: 305 NGVQLRFFKFQRWECCHS 252
           N ++ R   FQR   CHS
Sbjct: 215 NSLRSRSRSFQRTSSCHS 232


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -1

Query: 305 NGVQLRFFKFQRWECCHS 252
           N ++ R   FQR   CHS
Sbjct: 215 NSLRSRSRSFQRTSSCHS 232


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -1

Query: 305 NGVQLRFFKFQRWECCHS 252
           N ++ R   FQR   CHS
Sbjct: 215 NSLRSRSRSFQRTSSCHS 232


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -1

Query: 305 NGVQLRFFKFQRWECCHS 252
           N ++ R   FQR   CHS
Sbjct: 215 NSLRSRSRSFQRTSSCHS 232


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -1

Query: 305 NGVQLRFFKFQRWECCHS 252
           N ++ R   FQR   CHS
Sbjct: 215 NSLRSRSRSFQRTSSCHS 232


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -1

Query: 305 NGVQLRFFKFQRWECCHS 252
           N ++ R   FQR   CHS
Sbjct: 215 NSLRSRSRSFQRTSSCHS 232


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -1

Query: 305 NGVQLRFFKFQRWECCHS 252
           N ++ R   FQR   CHS
Sbjct: 215 NSLRSRSRSFQRTSSCHS 232


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,805
Number of Sequences: 438
Number of extensions: 2292
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10750329
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)