Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00296
         (775 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    27   0.22 
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    27   0.22 
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    27   0.22 
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    27   0.22 
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    27   0.22 
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    27   0.22 
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           27   0.22 
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    27   0.22 
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    24   1.2  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    24   1.2  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    24   1.2  
AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.            24   1.6  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    23   2.7  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    23   2.7  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    22   6.3  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    21   8.3  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    21   8.3  

>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 26.6 bits (56), Expect = 0.22
 Identities = 20/60 (33%), Positives = 29/60 (48%)
 Frame = -2

Query: 732 TQVPSDDNDSQIWNPPRISRRLSTFSDSDIHPLPEIERRRSSRTAPVDLELQPPNVPSTS 553
           T V S  + S    PPR +  LST S+S+         + S  T+P+ +   PP  P+TS
Sbjct: 108 TGVASPQDLSTNGAPPRSTPPLSTPSNSNA-------TKSSGLTSPLSVSTSPPGKPATS 160


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 26.6 bits (56), Expect = 0.22
 Identities = 20/60 (33%), Positives = 29/60 (48%)
 Frame = -2

Query: 732 TQVPSDDNDSQIWNPPRISRRLSTFSDSDIHPLPEIERRRSSRTAPVDLELQPPNVPSTS 553
           T V S  + S    PPR +  LST S+S+         + S  T+P+ +   PP  P+TS
Sbjct: 108 TGVASPQDLSTNGAPPRSTPPLSTPSNSNA-------TKSSGLTSPLSVSTSPPGKPATS 160


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 26.6 bits (56), Expect = 0.22
 Identities = 20/60 (33%), Positives = 29/60 (48%)
 Frame = -2

Query: 732 TQVPSDDNDSQIWNPPRISRRLSTFSDSDIHPLPEIERRRSSRTAPVDLELQPPNVPSTS 553
           T V S  + S    PPR +  LST S+S+         + S  T+P+ +   PP  P+TS
Sbjct: 108 TGVASPQDLSTNGAPPRSTPPLSTPSNSNA-------TKSSGLTSPLSVSTSPPGKPATS 160


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 26.6 bits (56), Expect = 0.22
 Identities = 20/60 (33%), Positives = 29/60 (48%)
 Frame = -2

Query: 732 TQVPSDDNDSQIWNPPRISRRLSTFSDSDIHPLPEIERRRSSRTAPVDLELQPPNVPSTS 553
           T V S  + S    PPR +  LST S+S+         + S  T+P+ +   PP  P+TS
Sbjct: 108 TGVASPQDLSTNGAPPRSTPPLSTPSNSNA-------TKSSGLTSPLSVSTSPPGKPATS 160


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 26.6 bits (56), Expect = 0.22
 Identities = 20/60 (33%), Positives = 29/60 (48%)
 Frame = -2

Query: 732 TQVPSDDNDSQIWNPPRISRRLSTFSDSDIHPLPEIERRRSSRTAPVDLELQPPNVPSTS 553
           T V S  + S    PPR +  LST S+S+         + S  T+P+ +   PP  P+TS
Sbjct: 108 TGVASPQDLSTNGAPPRSTPPLSTPSNSNA-------TKSSGLTSPLSVSTSPPGKPATS 160


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 26.6 bits (56), Expect = 0.22
 Identities = 20/60 (33%), Positives = 29/60 (48%)
 Frame = -2

Query: 732 TQVPSDDNDSQIWNPPRISRRLSTFSDSDIHPLPEIERRRSSRTAPVDLELQPPNVPSTS 553
           T V S  + S    PPR +  LST S+S+         + S  T+P+ +   PP  P+TS
Sbjct: 64  TGVASPQDLSTNGAPPRSTPPLSTPSNSNA-------TKSSGLTSPLSVSTSPPGKPATS 116


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 26.6 bits (56), Expect = 0.22
 Identities = 20/60 (33%), Positives = 29/60 (48%)
 Frame = -2

Query: 732 TQVPSDDNDSQIWNPPRISRRLSTFSDSDIHPLPEIERRRSSRTAPVDLELQPPNVPSTS 553
           T V S  + S    PPR +  LST S+S+         + S  T+P+ +   PP  P+TS
Sbjct: 108 TGVASPQDLSTNGAPPRSTPPLSTPSNSNA-------TKSSGLTSPLSVSTSPPGKPATS 160


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 26.6 bits (56), Expect = 0.22
 Identities = 20/60 (33%), Positives = 29/60 (48%)
 Frame = -2

Query: 732 TQVPSDDNDSQIWNPPRISRRLSTFSDSDIHPLPEIERRRSSRTAPVDLELQPPNVPSTS 553
           T V S  + S    PPR +  LST S+S+         + S  T+P+ +   PP  P+TS
Sbjct: 108 TGVASPQDLSTNGAPPRSTPPLSTPSNSNA-------TKSSGLTSPLSVSTSPPGKPATS 160


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -2

Query: 654 DSDIHPLPEIERRRSSRTAPVDLELQPPN 568
           D+ +HP P I ++ +S +  V+     PN
Sbjct: 170 DTSLHPSPRITKKANSVSVKVENRRNSPN 198


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -2

Query: 654 DSDIHPLPEIERRRSSRTAPVDLELQPPN 568
           D+ +HP P I ++ +S +  V+     PN
Sbjct: 118 DTSLHPSPRITKKANSVSVKVENRRNSPN 146


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -2

Query: 654 DSDIHPLPEIERRRSSRTAPVDLELQPPN 568
           D+ +HP P I ++ +S +  V+     PN
Sbjct: 301 DTSLHPSPRITKKANSVSVKVENRRNSPN 329



 Score = 23.8 bits (49), Expect = 1.6
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -2

Query: 576 PPNVPSTSGNTDAQISEQEWMEENSPT 496
           P +VP   G+    + E  WM+E   T
Sbjct: 98  PMDVPHGMGSPGVNVPEYPWMKEKKTT 124


>AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.
          Length = 150

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -2

Query: 576 PPNVPSTSGNTDAQISEQEWMEENSPT 496
           P +VP   G+    + E  WM+E   T
Sbjct: 98  PMDVPHGMGSPGVNVPEYPWMKEKKTT 124


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 10/35 (28%), Positives = 19/35 (54%)
 Frame = +1

Query: 223 SPNPSIQLEPKLLESIGGFLIQQKNLKVRYTVLRI 327
           S NP  + +P+LL+    F    K+L V + ++ +
Sbjct: 31  SANPDEEPDPELLDRYDNFYQTTKSLLVLFQIMGV 65


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 10/35 (28%), Positives = 19/35 (54%)
 Frame = +1

Query: 223 SPNPSIQLEPKLLESIGGFLIQQKNLKVRYTVLRI 327
           S NP  + +P+LL+    F    K+L V + ++ +
Sbjct: 31  SANPDEEPDPELLDRYDNFYQTTKSLLVLFQIMGV 65


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 5/13 (38%), Positives = 10/13 (76%)
 Frame = -3

Query: 527 NKSGWKKTVQHKM 489
           NK GW+ +++H +
Sbjct: 123 NKQGWQNSIRHNL 135


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +2

Query: 479 WHFPFYVGLFSSIHSCSEI 535
           W F  +VG+ S+I  C  I
Sbjct: 157 WLFILWVGILSTIFLCDTI 175


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -2

Query: 669 LSTFSDSDIHPLPEIERRRSSRTAPVDLELQPPNVPS 559
           L++FSDS I  + EIE  +  + A  +L       PS
Sbjct: 476 LTSFSDSSIPKVKEIEWPQVPKNATDNLTYLRIGAPS 512


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,862
Number of Sequences: 336
Number of extensions: 4784
Number of successful extensions: 22
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20857569
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)