Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00296
         (775 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118323-1|AAM48352.1| 1843|Drosophila melanogaster LD10526p pro...    33   0.44 
AE014298-2899|AAF48990.3| 2006|Drosophila melanogaster CG12238-P...    33   0.44 
AE014134-1403|AAF52603.3| 1675|Drosophila melanogaster CG8683-PA...    32   1.0  
BT010042-1|AAQ22511.1| 2045|Drosophila melanogaster LD36052p pro...    29   9.4  
AF157066-1|AAD43129.1| 2262|Drosophila melanogaster klarsicht pr...    29   9.4  
AE014296-105|AAF47389.1| 2262|Drosophila melanogaster CG17046-PA...    29   9.4  
AE014296-104|ABI31227.1| 2045|Drosophila melanogaster CG17046-PB...    29   9.4  

>AY118323-1|AAM48352.1| 1843|Drosophila melanogaster LD10526p
           protein.
          Length = 1843

 Score = 33.1 bits (72), Expect = 0.44
 Identities = 13/42 (30%), Positives = 26/42 (61%)
 Frame = -2

Query: 690 PPRISRRLSTFSDSDIHPLPEIERRRSSRTAPVDLELQPPNV 565
           P R +RR +T +++++ P P+  R+R S+ +    +L PP +
Sbjct: 809 PLRATRRTTTSTNTNLQPTPKSTRKRQSKASVQQSQLPPPTM 850


>AE014298-2899|AAF48990.3| 2006|Drosophila melanogaster CG12238-PA
            protein.
          Length = 2006

 Score = 33.1 bits (72), Expect = 0.44
 Identities = 13/42 (30%), Positives = 26/42 (61%)
 Frame = -2

Query: 690  PPRISRRLSTFSDSDIHPLPEIERRRSSRTAPVDLELQPPNV 565
            P R +RR +T +++++ P P+  R+R S+ +    +L PP +
Sbjct: 972  PLRATRRTTTSTNTNLQPTPKSTRKRQSKASVQQSQLPPPTM 1013


>AE014134-1403|AAF52603.3| 1675|Drosophila melanogaster CG8683-PA
           protein.
          Length = 1675

 Score = 31.9 bits (69), Expect = 1.0
 Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 7/53 (13%)
 Frame = -1

Query: 232 GLVKLPSIKDYWR---NHKL-YGTRLH*KYREWNISTVPLILKS---F*LKTP 95
           GLV +P IK  WR   NH L      H + REW +  +  ++KS   F  KTP
Sbjct: 771 GLVNMPRIKVLWRPLTNHLLEVCQHRHIRMREWGVEAITYLVKSALQFKHKTP 823


>BT010042-1|AAQ22511.1| 2045|Drosophila melanogaster LD36052p protein.
          Length = 2045

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 16/35 (45%), Positives = 22/35 (62%)
 Frame = -2

Query: 624  ERRRSSRTAPVDLELQPPNVPSTSGNTDAQISEQE 520
            ERRRSSR     ++L P    S+SG +D++  EQE
Sbjct: 1411 ERRRSSRNLEKCIKLIPATTSSSSG-SDSEDGEQE 1444


>AF157066-1|AAD43129.1| 2262|Drosophila melanogaster klarsicht protein
            protein.
          Length = 2262

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 16/35 (45%), Positives = 22/35 (62%)
 Frame = -2

Query: 624  ERRRSSRTAPVDLELQPPNVPSTSGNTDAQISEQE 520
            ERRRSSR     ++L P    S+SG +D++  EQE
Sbjct: 1628 ERRRSSRNLEKCIKLIPATTSSSSG-SDSEDGEQE 1661


>AE014296-105|AAF47389.1| 2262|Drosophila melanogaster CG17046-PA,
            isoform A protein.
          Length = 2262

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 16/35 (45%), Positives = 22/35 (62%)
 Frame = -2

Query: 624  ERRRSSRTAPVDLELQPPNVPSTSGNTDAQISEQE 520
            ERRRSSR     ++L P    S+SG +D++  EQE
Sbjct: 1628 ERRRSSRNLEKCIKLIPATTSSSSG-SDSEDGEQE 1661


>AE014296-104|ABI31227.1| 2045|Drosophila melanogaster CG17046-PB,
            isoform B protein.
          Length = 2045

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 16/35 (45%), Positives = 22/35 (62%)
 Frame = -2

Query: 624  ERRRSSRTAPVDLELQPPNVPSTSGNTDAQISEQE 520
            ERRRSSR     ++L P    S+SG +D++  EQE
Sbjct: 1411 ERRRSSRNLEKCIKLIPATTSSSSG-SDSEDGEQE 1444


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,267,305
Number of Sequences: 53049
Number of extensions: 807931
Number of successful extensions: 2024
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1889
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2024
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3581842374
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)