Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00295
         (392 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   1.4  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       21   3.3  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    21   4.4  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    20   7.6  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 1.4
 Identities = 11/28 (39%), Positives = 12/28 (42%)
 Frame = -2

Query: 343  GQTPLLMSSIRSCGGLPSTVHPTDCAVP 260
            G  PLL S  R  G +P      DC  P
Sbjct: 979  GSFPLLRSLNRGLGLIPDNPSREDCTKP 1006



 Score = 21.0 bits (42), Expect = 4.4
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -2

Query: 343  GQTPLLMSSIRSCGGLPSTVHPTDC 269
            G+ PLL +      G PS +  T+C
Sbjct: 2675 GKHPLLKTLNNELRGTPSDISVTNC 2699


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.4 bits (43), Expect = 3.3
 Identities = 12/39 (30%), Positives = 16/39 (41%)
 Frame = -2

Query: 244 SQKGTGPLICFS*SSQFRLHPQGRCCRCV*YFSAFYDHE 128
           S + + P IC        L   G  C+C   F+  Y HE
Sbjct: 29  SGRNSAPSICGEHGHCVNLPGVGHRCQCQPGFTGKYCHE 67


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 85  EQQLSGLVCFELSAA 41
           E+ + GLVCF L A+
Sbjct: 400 EEVVLGLVCFRLKAS 414


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 20.2 bits (40), Expect = 7.6
 Identities = 6/24 (25%), Positives = 15/24 (62%)
 Frame = -1

Query: 197  IPITSSREMLPLCLIFFCFLRSRG 126
            +P+ ++  ++ + +I  C LR +G
Sbjct: 1612 VPVVAAVLVIIVAIIVICVLRGKG 1635


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,480
Number of Sequences: 336
Number of extensions: 1981
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8330471
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)