Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00294
(751 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK026946-1|BAB15598.1| 579|Homo sapiens protein ( Homo sapiens ... 104 3e-22
AF449187-2|AAM97341.1| 579|Homo sapiens ARL6IP2 protein. 104 3e-22
AF449187-1|AAM97342.1| 583|Homo sapiens ARL6IP2 protein. 104 3e-22
AC016995-1|AAX88950.1| 579|Homo sapiens unknown protein. 104 3e-22
CR457153-1|CAG33434.1| 475|Homo sapiens SPG3A protein. 101 3e-21
BC010708-1|AAH10708.2| 558|Homo sapiens spastic paraplegia 3A (... 101 3e-21
AY032844-1|AAK51160.1| 475|Homo sapiens GTPase protein. 101 3e-21
AF444143-1|AAL37898.1| 558|Homo sapiens brain-specific GTP-bind... 101 3e-21
AF131801-1|AAD20047.1| 475|Homo sapiens Unknown protein. 101 3e-21
AK223436-1|BAD97156.1| 558|Homo sapiens atlastin variant protein. 100 1e-20
BC077727-1|AAH77727.1| 541|Homo sapiens DKFZP564J0863 protein p... 99 2e-20
AK097588-1|BAC05111.1| 567|Homo sapiens protein ( Homo sapiens ... 99 2e-20
AK023383-1|BAB14552.1| 541|Homo sapiens protein ( Homo sapiens ... 99 2e-20
BC053508-1|AAH53508.1| 412|Homo sapiens ARL6IP2 protein protein. 76 1e-13
BC053989-1|AAH53989.1| 631|Homo sapiens zinc finger protein 179... 42 0.003
AB026054-1|BAA84698.1| 632|Homo sapiens brain finger protein pr... 42 0.003
BX537949-1|CAD97917.1| 633|Homo sapiens hypothetical protein pr... 31 3.3
BC131713-1|AAI31714.1| 633|Homo sapiens guanylate binding prote... 31 3.3
AL691464-1|CAI22141.1| 633|Homo sapiens guanylate binding prote... 31 3.3
AK131356-1|BAD18509.1| 633|Homo sapiens protein ( Homo sapiens ... 31 3.3
M55543-1|AAA67323.1| 591|Homo sapiens guanylate binding protein... 30 7.7
CR457062-1|CAG33343.1| 591|Homo sapiens GBP2 protein. 30 7.7
BC073163-1|AAH73163.1| 591|Homo sapiens guanylate binding prote... 30 7.7
BC070055-1|AAH70055.1| 640|Homo sapiens guanylate binding prote... 30 7.7
BC063819-1|AAH63819.1| 290|Homo sapiens GBP3 protein protein. 30 7.7
BC031639-1|AAH31639.1| 586|Homo sapiens guanylate binding prote... 30 7.7
BC022272-1|AAH22272.1| 481|Homo sapiens GBP2 protein protein. 30 7.7
BC017992-1|AAH17992.1| 449|Homo sapiens Unknown (protein for IM... 30 7.7
BC017889-1|AAH17889.1| 410|Homo sapiens Unknown (protein for IM... 30 7.7
AY358953-1|AAQ89312.1| 586|Homo sapiens ALEI2427 protein. 30 7.7
AL832576-1|CAD89936.1| 640|Homo sapiens hypothetical protein pr... 30 7.7
AL832451-1|CAD89925.1| 591|Homo sapiens hypothetical protein pr... 30 7.7
AL160008-4|CAI22971.1| 440|Homo sapiens guanylate binding prote... 30 7.7
AL160008-3|CAI22970.1| 563|Homo sapiens guanylate binding prote... 30 7.7
AL160008-2|CAM28327.1| 595|Homo sapiens guanylate binding prote... 30 7.7
AL139416-8|CAI21698.1| 440|Homo sapiens guanylate binding prote... 30 7.7
AL139416-7|CAI21697.1| 563|Homo sapiens guanylate binding prote... 30 7.7
AL139416-6|CAM28262.1| 595|Homo sapiens guanylate binding prote... 30 7.7
AK131094-1|BAC85144.1| 649|Homo sapiens FLJ00316 protein protein. 30 7.7
AK096141-1|BAC04709.1| 638|Homo sapiens protein ( Homo sapiens ... 30 7.7
AK090479-1|BAC03460.1| 504|Homo sapiens FLJ00401 protein protein. 30 7.7
AF430643-1|AAN39036.1| 586|Homo sapiens GBP-5a protein. 30 7.7
AF430642-1|AAN39035.1| 586|Homo sapiens GBP-5b protein. 30 7.7
AF328727-1|AAO40731.1| 489|Homo sapiens CTCL tumor antigen GBP-... 30 7.7
AF288815-1|AAL02055.1| 586|Homo sapiens guanylate binding prote... 30 7.7
AF288814-1|AAL02054.1| 640|Homo sapiens guanylate binding prote... 30 7.7
>AK026946-1|BAB15598.1| 579|Homo sapiens protein ( Homo sapiens
cDNA: FLJ23293 fis, clone HEP10514. ).
Length = 579
Score = 104 bits (250), Expect = 3e-22
Identities = 46/80 (57%), Positives = 61/80 (76%)
Frame = +1
Query: 268 DNAKPLGEDSEPLGGFTWRGGSERNTVGLLIWSEPIIKTLENGDKVAVLLMDTQGLFDSK 447
D+ +G ++EPL GFTWRGG ER T G+ +W+E + NG KVAVLLMDTQG FDS+
Sbjct: 122 DSQSWIGGNNEPLTGFTWRGGCERETTGIQVWNEVFVIDRPNGTKVAVLLMDTQGAFDSQ 181
Query: 448 TTMRDCSIIFALSTLLSSVQ 507
+T++DC+ +FALST+ SSVQ
Sbjct: 182 STIKDCATVFALSTMTSSVQ 201
Score = 76.2 bits (179), Expect = 1e-13
Identities = 35/70 (50%), Positives = 46/70 (65%)
Frame = +3
Query: 510 YNLKENLQENHLQFLQLFTQYAKAADNGEELKSFQNLLFLIRDWSYYDTHPYGSKGGDSL 689
YNL +N+QE+ LQ LQLFT+Y + A K FQ L+FLIRDWSY H YG +GG
Sbjct: 203 YNLSQNIQEDDLQHLQLFTEYGRLAMEEIYQKPFQTLMFLIRDWSYPYEHSYGLEGGKQF 262
Query: 690 VAKRFEVTKD 719
+ KR +V ++
Sbjct: 263 LEKRLQVKQN 272
Score = 64.5 bits (150), Expect = 4e-10
Identities = 29/63 (46%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Frame = +2
Query: 59 PREIQL-LKYKDDGSFDLDVVALQSVLNRDDVKDLPVVLFSVAGPFRTGKSFLLNYFLRY 235
P +Q+ L ++DD +F+LD AL+ +L ++ ++DL +V+ SVAG FR GKSFLL++ LRY
Sbjct: 58 PCPVQIVLAHEDDHNFELDEEALEQILLQEHIRDLNIVVVSVAGAFRKGKSFLLDFMLRY 117
Query: 236 LHS 244
+++
Sbjct: 118 MYN 120
>AF449187-2|AAM97341.1| 579|Homo sapiens ARL6IP2 protein.
Length = 579
Score = 104 bits (250), Expect = 3e-22
Identities = 46/80 (57%), Positives = 61/80 (76%)
Frame = +1
Query: 268 DNAKPLGEDSEPLGGFTWRGGSERNTVGLLIWSEPIIKTLENGDKVAVLLMDTQGLFDSK 447
D+ +G ++EPL GFTWRGG ER T G+ +W+E + NG KVAVLLMDTQG FDS+
Sbjct: 122 DSQSWIGGNNEPLTGFTWRGGCERETTGIQVWNEVFVIDRPNGTKVAVLLMDTQGAFDSQ 181
Query: 448 TTMRDCSIIFALSTLLSSVQ 507
+T++DC+ +FALST+ SSVQ
Sbjct: 182 STIKDCATVFALSTMTSSVQ 201
Score = 76.2 bits (179), Expect = 1e-13
Identities = 35/70 (50%), Positives = 46/70 (65%)
Frame = +3
Query: 510 YNLKENLQENHLQFLQLFTQYAKAADNGEELKSFQNLLFLIRDWSYYDTHPYGSKGGDSL 689
YNL +N+QE+ LQ LQLFT+Y + A K FQ L+FLIRDWSY H YG +GG
Sbjct: 203 YNLSQNIQEDDLQHLQLFTEYGRLAMEEIYQKPFQTLMFLIRDWSYPYEHSYGLEGGKQF 262
Query: 690 VAKRFEVTKD 719
+ KR +V ++
Sbjct: 263 LEKRLQVKQN 272
Score = 64.5 bits (150), Expect = 4e-10
Identities = 29/63 (46%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Frame = +2
Query: 59 PREIQL-LKYKDDGSFDLDVVALQSVLNRDDVKDLPVVLFSVAGPFRTGKSFLLNYFLRY 235
P +Q+ L ++DD +F+LD AL+ +L ++ ++DL +V+ SVAG FR GKSFLL++ LRY
Sbjct: 58 PCPVQIVLAHEDDHNFELDEEALEQILLQEHIRDLNIVVVSVAGAFRKGKSFLLDFMLRY 117
Query: 236 LHS 244
+++
Sbjct: 118 MYN 120
>AF449187-1|AAM97342.1| 583|Homo sapiens ARL6IP2 protein.
Length = 583
Score = 104 bits (250), Expect = 3e-22
Identities = 46/80 (57%), Positives = 61/80 (76%)
Frame = +1
Query: 268 DNAKPLGEDSEPLGGFTWRGGSERNTVGLLIWSEPIIKTLENGDKVAVLLMDTQGLFDSK 447
D+ +G ++EPL GFTWRGG ER T G+ +W+E + NG KVAVLLMDTQG FDS+
Sbjct: 122 DSQSWIGGNNEPLTGFTWRGGCERETTGIQVWNEVFVIDRPNGTKVAVLLMDTQGAFDSQ 181
Query: 448 TTMRDCSIIFALSTLLSSVQ 507
+T++DC+ +FALST+ SSVQ
Sbjct: 182 STIKDCATVFALSTMTSSVQ 201
Score = 76.2 bits (179), Expect = 1e-13
Identities = 35/70 (50%), Positives = 46/70 (65%)
Frame = +3
Query: 510 YNLKENLQENHLQFLQLFTQYAKAADNGEELKSFQNLLFLIRDWSYYDTHPYGSKGGDSL 689
YNL +N+QE+ LQ LQLFT+Y + A K FQ L+FLIRDWSY H YG +GG
Sbjct: 203 YNLSQNIQEDDLQHLQLFTEYGRLAMEEIYQKPFQTLMFLIRDWSYPYEHSYGLEGGKQF 262
Query: 690 VAKRFEVTKD 719
+ KR +V ++
Sbjct: 263 LEKRLQVKQN 272
Score = 64.5 bits (150), Expect = 4e-10
Identities = 29/63 (46%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Frame = +2
Query: 59 PREIQL-LKYKDDGSFDLDVVALQSVLNRDDVKDLPVVLFSVAGPFRTGKSFLLNYFLRY 235
P +Q+ L ++DD +F+LD AL+ +L ++ ++DL +V+ SVAG FR GKSFLL++ LRY
Sbjct: 58 PCPVQIVLAHEDDHNFELDEEALEQILLQEHIRDLNIVVVSVAGAFRKGKSFLLDFMLRY 117
Query: 236 LHS 244
+++
Sbjct: 118 MYN 120
>AC016995-1|AAX88950.1| 579|Homo sapiens unknown protein.
Length = 579
Score = 104 bits (250), Expect = 3e-22
Identities = 46/80 (57%), Positives = 61/80 (76%)
Frame = +1
Query: 268 DNAKPLGEDSEPLGGFTWRGGSERNTVGLLIWSEPIIKTLENGDKVAVLLMDTQGLFDSK 447
D+ +G ++EPL GFTWRGG ER T G+ +W+E + NG KVAVLLMDTQG FDS+
Sbjct: 122 DSQSWIGGNNEPLTGFTWRGGCERETTGIQVWNEVFVIDRPNGTKVAVLLMDTQGAFDSQ 181
Query: 448 TTMRDCSIIFALSTLLSSVQ 507
+T++DC+ +FALST+ SSVQ
Sbjct: 182 STIKDCATVFALSTMTSSVQ 201
Score = 76.2 bits (179), Expect = 1e-13
Identities = 35/70 (50%), Positives = 46/70 (65%)
Frame = +3
Query: 510 YNLKENLQENHLQFLQLFTQYAKAADNGEELKSFQNLLFLIRDWSYYDTHPYGSKGGDSL 689
YNL +N+QE+ LQ LQLFT+Y + A K FQ L+FLIRDWSY H YG +GG
Sbjct: 203 YNLSQNIQEDDLQHLQLFTEYGRLAMEEIYQKPFQTLMFLIRDWSYPYEHSYGLEGGKQF 262
Query: 690 VAKRFEVTKD 719
+ KR +V ++
Sbjct: 263 LEKRLQVKQN 272
Score = 64.5 bits (150), Expect = 4e-10
Identities = 29/63 (46%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Frame = +2
Query: 59 PREIQL-LKYKDDGSFDLDVVALQSVLNRDDVKDLPVVLFSVAGPFRTGKSFLLNYFLRY 235
P +Q+ L ++DD +F+LD AL+ +L ++ ++DL +V+ SVAG FR GKSFLL++ LRY
Sbjct: 58 PCPVQIVLAHEDDHNFELDEEALEQILLQEHIRDLNIVVVSVAGAFRKGKSFLLDFMLRY 117
Query: 236 LHS 244
+++
Sbjct: 118 MYN 120
>CR457153-1|CAG33434.1| 475|Homo sapiens SPG3A protein.
Length = 475
Score = 101 bits (242), Expect = 3e-21
Identities = 45/75 (60%), Positives = 60/75 (80%)
Frame = +1
Query: 283 LGEDSEPLGGFTWRGGSERNTVGLLIWSEPIIKTLENGDKVAVLLMDTQGLFDSKTTMRD 462
+G+ +EPL GF+WRGGSER T G+ IWSE + +G KVAVLLMDTQG FDS++T+RD
Sbjct: 17 VGDYNEPLTGFSWRGGSERETTGIQIWSEIFLINKPDGKKVAVLLMDTQGTFDSQSTLRD 76
Query: 463 CSIIFALSTLLSSVQ 507
+ +FALST++SS+Q
Sbjct: 77 SATVFALSTMISSIQ 91
Score = 72.9 bits (171), Expect = 1e-12
Identities = 33/68 (48%), Positives = 46/68 (67%)
Frame = +3
Query: 510 YNLKENLQENHLQFLQLFTQYAKAADNGEELKSFQNLLFLIRDWSYYDTHPYGSKGGDSL 689
YNL +N+QE+ LQ LQLFT+Y + A LK FQ+L+FL+RDWS+ YG+ GG
Sbjct: 93 YNLSQNVQEDDLQHLQLFTEYGRLAMEETFLKPFQSLIFLVRDWSFPYEFSYGADGGAKF 152
Query: 690 VAKRFEVT 713
+ KR +V+
Sbjct: 153 LEKRLKVS 160
>BC010708-1|AAH10708.2| 558|Homo sapiens spastic paraplegia 3A
(autosomal dominant) protein.
Length = 558
Score = 101 bits (242), Expect = 3e-21
Identities = 45/75 (60%), Positives = 60/75 (80%)
Frame = +1
Query: 283 LGEDSEPLGGFTWRGGSERNTVGLLIWSEPIIKTLENGDKVAVLLMDTQGLFDSKTTMRD 462
+G+ +EPL GF+WRGGSER T G+ IWSE + +G KVAVLLMDTQG FDS++T+RD
Sbjct: 100 VGDYNEPLTGFSWRGGSERETTGIQIWSEIFLINKPDGKKVAVLLMDTQGTFDSQSTLRD 159
Query: 463 CSIIFALSTLLSSVQ 507
+ +FALST++SS+Q
Sbjct: 160 SATVFALSTMISSIQ 174
Score = 69.7 bits (163), Expect = 1e-11
Identities = 32/68 (47%), Positives = 45/68 (66%)
Frame = +3
Query: 510 YNLKENLQENHLQFLQLFTQYAKAADNGEELKSFQNLLFLIRDWSYYDTHPYGSKGGDSL 689
YNL +N+QE+ LQ LQL T+Y + A LK FQ+L+FL+RDWS+ YG+ GG
Sbjct: 176 YNLSQNVQEDDLQHLQLCTEYGRLAMEETFLKPFQSLIFLVRDWSFPYEFSYGADGGAKF 235
Query: 690 VAKRFEVT 713
+ KR +V+
Sbjct: 236 LEKRLKVS 243
Score = 62.1 bits (144), Expect = 2e-09
Identities = 29/59 (49%), Positives = 42/59 (71%)
Frame = +2
Query: 68 IQLLKYKDDGSFDLDVVALQSVLNRDDVKDLPVVLFSVAGPFRTGKSFLLNYFLRYLHS 244
+Q+L KD+ SF+LD AL +L + V+D VV SVAG FR GKSFL+++ LRY+++
Sbjct: 35 VQVLIVKDEHSFELDETALNRILLSEAVRDKEVVAVSVAGAFRKGKSFLMDFMLRYMYN 93
>AY032844-1|AAK51160.1| 475|Homo sapiens GTPase protein.
Length = 475
Score = 101 bits (242), Expect = 3e-21
Identities = 45/75 (60%), Positives = 60/75 (80%)
Frame = +1
Query: 283 LGEDSEPLGGFTWRGGSERNTVGLLIWSEPIIKTLENGDKVAVLLMDTQGLFDSKTTMRD 462
+G+ +EPL GF+WRGGSER T G+ IWSE + +G KVAVLLMDTQG FDS++T+RD
Sbjct: 17 VGDYNEPLTGFSWRGGSERETTGIQIWSEIFLINKPDGKKVAVLLMDTQGTFDSQSTLRD 76
Query: 463 CSIIFALSTLLSSVQ 507
+ +FALST++SS+Q
Sbjct: 77 SATVFALSTMISSIQ 91
Score = 72.9 bits (171), Expect = 1e-12
Identities = 33/68 (48%), Positives = 46/68 (67%)
Frame = +3
Query: 510 YNLKENLQENHLQFLQLFTQYAKAADNGEELKSFQNLLFLIRDWSYYDTHPYGSKGGDSL 689
YNL +N+QE+ LQ LQLFT+Y + A LK FQ+L+FL+RDWS+ YG+ GG
Sbjct: 93 YNLSQNVQEDDLQHLQLFTEYGRLAMEETFLKPFQSLIFLVRDWSFPYEFSYGADGGAKF 152
Query: 690 VAKRFEVT 713
+ KR +V+
Sbjct: 153 LEKRLKVS 160
>AF444143-1|AAL37898.1| 558|Homo sapiens brain-specific GTP-binding
protein protein.
Length = 558
Score = 101 bits (242), Expect = 3e-21
Identities = 45/75 (60%), Positives = 60/75 (80%)
Frame = +1
Query: 283 LGEDSEPLGGFTWRGGSERNTVGLLIWSEPIIKTLENGDKVAVLLMDTQGLFDSKTTMRD 462
+G+ +EPL GF+WRGGSER T G+ IWSE + +G KVAVLLMDTQG FDS++T+RD
Sbjct: 100 VGDYNEPLTGFSWRGGSERETTGIQIWSEIFLINKPDGKKVAVLLMDTQGTFDSQSTLRD 159
Query: 463 CSIIFALSTLLSSVQ 507
+ +FALST++SS+Q
Sbjct: 160 SATVFALSTMISSIQ 174
Score = 72.9 bits (171), Expect = 1e-12
Identities = 33/68 (48%), Positives = 46/68 (67%)
Frame = +3
Query: 510 YNLKENLQENHLQFLQLFTQYAKAADNGEELKSFQNLLFLIRDWSYYDTHPYGSKGGDSL 689
YNL +N+QE+ LQ LQLFT+Y + A LK FQ+L+FL+RDWS+ YG+ GG
Sbjct: 176 YNLSQNVQEDDLQHLQLFTEYGRLAMEETFLKPFQSLIFLVRDWSFPYEFSYGADGGAKF 235
Query: 690 VAKRFEVT 713
+ KR +V+
Sbjct: 236 LEKRLKVS 243
Score = 63.7 bits (148), Expect = 7e-10
Identities = 30/59 (50%), Positives = 42/59 (71%)
Frame = +2
Query: 68 IQLLKYKDDGSFDLDVVALQSVLNRDDVKDLPVVLFSVAGPFRTGKSFLLNYFLRYLHS 244
+Q+L KDD SF+LD AL +L + V+D VV SVAG FR GKSFL+++ LRY+++
Sbjct: 35 VQVLIVKDDHSFELDETALNRILLSEAVRDKEVVAVSVAGAFRKGKSFLMDFMLRYMYN 93
>AF131801-1|AAD20047.1| 475|Homo sapiens Unknown protein.
Length = 475
Score = 101 bits (242), Expect = 3e-21
Identities = 45/75 (60%), Positives = 60/75 (80%)
Frame = +1
Query: 283 LGEDSEPLGGFTWRGGSERNTVGLLIWSEPIIKTLENGDKVAVLLMDTQGLFDSKTTMRD 462
+G+ +EPL GF+WRGGSER T G+ IWSE + +G KVAVLLMDTQG FDS++T+RD
Sbjct: 17 VGDYNEPLTGFSWRGGSERETTGIQIWSEIFLINKPDGKKVAVLLMDTQGTFDSQSTLRD 76
Query: 463 CSIIFALSTLLSSVQ 507
+ +FALST++SS+Q
Sbjct: 77 SATVFALSTMISSIQ 91
Score = 72.9 bits (171), Expect = 1e-12
Identities = 33/68 (48%), Positives = 46/68 (67%)
Frame = +3
Query: 510 YNLKENLQENHLQFLQLFTQYAKAADNGEELKSFQNLLFLIRDWSYYDTHPYGSKGGDSL 689
YNL +N+QE+ LQ LQLFT+Y + A LK FQ+L+FL+RDWS+ YG+ GG
Sbjct: 93 YNLSQNVQEDDLQHLQLFTEYGRLAMEETFLKPFQSLIFLVRDWSFPYEFSYGADGGAKF 152
Query: 690 VAKRFEVT 713
+ KR +V+
Sbjct: 153 LEKRLKVS 160
>AK223436-1|BAD97156.1| 558|Homo sapiens atlastin variant protein.
Length = 558
Score = 99.5 bits (237), Expect = 1e-20
Identities = 44/75 (58%), Positives = 59/75 (78%)
Frame = +1
Query: 283 LGEDSEPLGGFTWRGGSERNTVGLLIWSEPIIKTLENGDKVAVLLMDTQGLFDSKTTMRD 462
+G+ +EPL GF+WRGGSER G+ IWSE + +G KVAVLLMDTQG FDS++T+RD
Sbjct: 100 VGDYNEPLTGFSWRGGSEREATGIQIWSEIFLINKPDGKKVAVLLMDTQGTFDSQSTLRD 159
Query: 463 CSIIFALSTLLSSVQ 507
+ +FALST++SS+Q
Sbjct: 160 SATVFALSTMISSIQ 174
Score = 72.9 bits (171), Expect = 1e-12
Identities = 33/68 (48%), Positives = 46/68 (67%)
Frame = +3
Query: 510 YNLKENLQENHLQFLQLFTQYAKAADNGEELKSFQNLLFLIRDWSYYDTHPYGSKGGDSL 689
YNL +N+QE+ LQ LQLFT+Y + A LK FQ+L+FL+RDWS+ YG+ GG
Sbjct: 176 YNLSQNVQEDDLQHLQLFTEYGRLAMEETFLKPFQSLIFLVRDWSFPYEFSYGADGGAKF 235
Query: 690 VAKRFEVT 713
+ KR +V+
Sbjct: 236 LEKRLKVS 243
Score = 63.7 bits (148), Expect = 7e-10
Identities = 30/59 (50%), Positives = 42/59 (71%)
Frame = +2
Query: 68 IQLLKYKDDGSFDLDVVALQSVLNRDDVKDLPVVLFSVAGPFRTGKSFLLNYFLRYLHS 244
+Q+L KDD SF+LD AL +L + V+D VV SVAG FR GKSFL+++ LRY+++
Sbjct: 35 VQVLIVKDDHSFELDETALNRILLSEAVRDKEVVAVSVAGAFRKGKSFLMDFMLRYMYN 93
>BC077727-1|AAH77727.1| 541|Homo sapiens DKFZP564J0863 protein
protein.
Length = 541
Score = 98.7 bits (235), Expect = 2e-20
Identities = 45/75 (60%), Positives = 56/75 (74%)
Frame = +1
Query: 283 LGEDSEPLGGFTWRGGSERNTVGLLIWSEPIIKTLENGDKVAVLLMDTQGLFDSKTTMRD 462
LG+ EPL GF+WRGGS+ T G+ IWSE G KVAV+LMDTQG FDS++T++D
Sbjct: 96 LGDPEEPLTGFSWRGGSDPETTGIQIWSEVFTVEKPGGKKVAVVLMDTQGAFDSQSTVKD 155
Query: 463 CSIIFALSTLLSSVQ 507
C+ IFALST+ SSVQ
Sbjct: 156 CATIFALSTMTSSVQ 170
Score = 69.7 bits (163), Expect = 1e-11
Identities = 32/67 (47%), Positives = 46/67 (68%)
Frame = +3
Query: 510 YNLKENLQENHLQFLQLFTQYAKAADNGEELKSFQNLLFLIRDWSYYDTHPYGSKGGDSL 689
YNL +N+QE+ LQ LQLFT+Y + A + K FQ L+FL+RDWS+ + YG +GG +
Sbjct: 172 YNLSQNIQEDDLQQLQLFTEYGRLAMDEIFQKPFQTLMFLVRDWSFPYEYSYGLQGGMAF 231
Query: 690 VAKRFEV 710
+ KR +V
Sbjct: 232 LDKRLQV 238
Score = 68.9 bits (161), Expect = 2e-11
Identities = 36/69 (52%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Frame = +2
Query: 41 ASMSGTPREIQL-LKYKDDGSFDLDVVALQSVLNRDDVKDLPVVLFSVAGPFRTGKSFLL 217
A S P +Q+ L KD SF+LD AL S+L +D ++DL VV+ SVAG FR GKSF+L
Sbjct: 18 AMESSKPGPVQVVLVQKDQHSFELDEKALASILLQDHIRDLDVVVVSVAGAFRKGKSFIL 77
Query: 218 NYFLRYLHS 244
++ LRYL+S
Sbjct: 78 DFMLRYLYS 86
>AK097588-1|BAC05111.1| 567|Homo sapiens protein ( Homo sapiens
cDNA FLJ40269 fis, clone TESTI2026597. ).
Length = 567
Score = 98.7 bits (235), Expect = 2e-20
Identities = 45/75 (60%), Positives = 56/75 (74%)
Frame = +1
Query: 283 LGEDSEPLGGFTWRGGSERNTVGLLIWSEPIIKTLENGDKVAVLLMDTQGLFDSKTTMRD 462
LG+ EPL GF+WRGGS+ T G+ IWSE G KVAV+LMDTQG FDS++T++D
Sbjct: 122 LGDPEEPLTGFSWRGGSDPETTGIQIWSEVFTVEKPGGKKVAVVLMDTQGAFDSQSTVKD 181
Query: 463 CSIIFALSTLLSSVQ 507
C+ IFALST+ SSVQ
Sbjct: 182 CATIFALSTMTSSVQ 196
Score = 67.7 bits (158), Expect = 4e-11
Identities = 31/67 (46%), Positives = 46/67 (68%)
Frame = +3
Query: 510 YNLKENLQENHLQFLQLFTQYAKAADNGEELKSFQNLLFLIRDWSYYDTHPYGSKGGDSL 689
Y+L +N+QE+ LQ LQLFT+Y + A + K FQ L+FL+RDWS+ + YG +GG +
Sbjct: 198 YSLSQNIQEDDLQQLQLFTEYGRLAMDEIFQKPFQTLMFLVRDWSFPYEYSYGLQGGMAF 257
Query: 690 VAKRFEV 710
+ KR +V
Sbjct: 258 LDKRLQV 264
Score = 52.4 bits (120), Expect = 2e-06
Identities = 23/39 (58%), Positives = 32/39 (82%)
Frame = +2
Query: 128 SVLNRDDVKDLPVVLFSVAGPFRTGKSFLLNYFLRYLHS 244
S+L +D ++DL VV+ SVAG FR GKSF+L++ LRYL+S
Sbjct: 74 SILLQDHIRDLDVVVVSVAGAFRKGKSFILDFMLRYLYS 112
>AK023383-1|BAB14552.1| 541|Homo sapiens protein ( Homo sapiens
cDNA FLJ13321 fis, clone OVARC1001703, weakly similar to
Mus musculus ARL-6 interacting protein-2 (Aip-2) mRNA.
).
Length = 541
Score = 98.7 bits (235), Expect = 2e-20
Identities = 45/75 (60%), Positives = 56/75 (74%)
Frame = +1
Query: 283 LGEDSEPLGGFTWRGGSERNTVGLLIWSEPIIKTLENGDKVAVLLMDTQGLFDSKTTMRD 462
LG+ EPL GF+WRGGS+ T G+ IWSE G KVAV+LMDTQG FDS++T++D
Sbjct: 96 LGDPEEPLTGFSWRGGSDPETTGIQIWSEVFTVEKPGGKKVAVVLMDTQGAFDSQSTVKD 155
Query: 463 CSIIFALSTLLSSVQ 507
C+ IFALST+ SSVQ
Sbjct: 156 CATIFALSTMTSSVQ 170
Score = 69.7 bits (163), Expect = 1e-11
Identities = 32/67 (47%), Positives = 46/67 (68%)
Frame = +3
Query: 510 YNLKENLQENHLQFLQLFTQYAKAADNGEELKSFQNLLFLIRDWSYYDTHPYGSKGGDSL 689
YNL +N+QE+ LQ LQLFT+Y + A + K FQ L+FL+RDWS+ + YG +GG +
Sbjct: 172 YNLSQNIQEDDLQQLQLFTEYGRLAMDEIFQKPFQTLMFLVRDWSFPYEYSYGLQGGMAF 231
Query: 690 VAKRFEV 710
+ KR +V
Sbjct: 232 LDKRLQV 238
Score = 67.7 bits (158), Expect = 4e-11
Identities = 36/69 (52%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Frame = +2
Query: 41 ASMSGTPREIQL-LKYKDDGSFDLDVVALQSVLNRDDVKDLPVVLFSVAGPFRTGKSFLL 217
A S P +Q+ L KD SF+LD AL S L +D ++DL VV+ SVAG FR GKSF+L
Sbjct: 18 AMESSKPGPVQVVLVQKDQHSFELDEKALASTLLQDHIRDLDVVVVSVAGAFRKGKSFIL 77
Query: 218 NYFLRYLHS 244
++ LRYL+S
Sbjct: 78 DFMLRYLYS 86
>BC053508-1|AAH53508.1| 412|Homo sapiens ARL6IP2 protein protein.
Length = 412
Score = 76.2 bits (179), Expect = 1e-13
Identities = 35/70 (50%), Positives = 46/70 (65%)
Frame = +3
Query: 510 YNLKENLQENHLQFLQLFTQYAKAADNGEELKSFQNLLFLIRDWSYYDTHPYGSKGGDSL 689
YNL +N+QE+ LQ LQLFT+Y + A K FQ L+FLIRDWSY H YG +GG
Sbjct: 32 YNLSQNIQEDDLQHLQLFTEYGRLAMEEIYQKPFQTLMFLIRDWSYPYEHSYGLEGGKQF 91
Query: 690 VAKRFEVTKD 719
+ KR +V ++
Sbjct: 92 LEKRLQVKQN 101
Score = 48.8 bits (111), Expect = 2e-05
Identities = 20/30 (66%), Positives = 27/30 (90%)
Frame = +1
Query: 418 MDTQGLFDSKTTMRDCSIIFALSTLLSSVQ 507
MDTQG FDS++T++DC+ +FALST+ SSVQ
Sbjct: 1 MDTQGAFDSQSTIKDCATVFALSTMTSSVQ 30
>BC053989-1|AAH53989.1| 631|Homo sapiens zinc finger protein 179
protein.
Length = 631
Score = 41.5 bits (93), Expect = 0.003
Identities = 28/83 (33%), Positives = 42/83 (50%)
Frame = +1
Query: 259 EKGDNAKPLGEDSEPLGGFTWRGGSERNTVGLLIWSEPIIKTLENGDKVAVLLMDTQGLF 438
E G+ +P G ++ L G W G+ G+ +WS P + E G KVAV L+DT
Sbjct: 197 ESGEGGRPRGGEAS-LQGCRW--GANGLARGIWMWSHPFLLGKE-GKKVAVFLVDTGDAM 252
Query: 439 DSKTTMRDCSIIFALSTLLSSVQ 507
+ + + AL+T+LSS Q
Sbjct: 253 SPELSRETRIKLCALTTMLSSYQ 275
Score = 36.7 bits (81), Expect = 0.089
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = +2
Query: 74 LLKYKDDGSFDLDVVALQSVLNRDDVKDLPVVLFSVAGPFRTGKSFLLNYFLRYL 238
L++ G L + A+ L +D PV L +V G +GKSFLLN+ L+ L
Sbjct: 139 LVRINASGGLILRMGAINRCLKHPLARDTPVCLLAVLGEQHSGKSFLLNHLLQGL 193
>AB026054-1|BAA84698.1| 632|Homo sapiens brain finger protein
protein.
Length = 632
Score = 41.5 bits (93), Expect = 0.003
Identities = 28/83 (33%), Positives = 42/83 (50%)
Frame = +1
Query: 259 EKGDNAKPLGEDSEPLGGFTWRGGSERNTVGLLIWSEPIIKTLENGDKVAVLLMDTQGLF 438
E G+ +P G ++ L G W G+ G+ +WS P + E G KVAV L+DT
Sbjct: 197 ESGEGGRPRGGEAS-LQGCRW--GANGLARGIWMWSHPFLLGKE-GKKVAVFLVDTGDAM 252
Query: 439 DSKTTMRDCSIIFALSTLLSSVQ 507
+ + + AL+T+LSS Q
Sbjct: 253 SPELSRETRIKLCALTTMLSSYQ 275
Score = 36.7 bits (81), Expect = 0.089
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = +2
Query: 74 LLKYKDDGSFDLDVVALQSVLNRDDVKDLPVVLFSVAGPFRTGKSFLLNYFLRYL 238
L++ G L + A+ L +D PV L +V G +GKSFLLN+ L+ L
Sbjct: 139 LVRINASGGLILRMGAINRCLKHPLARDTPVCLLAVLGEQHSGKSFLLNHLLQGL 193
>BX537949-1|CAD97917.1| 633|Homo sapiens hypothetical protein
protein.
Length = 633
Score = 31.5 bits (68), Expect = 3.3
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +2
Query: 161 PVVLFSVAGPFRTGKSFLLNYFLRYLH 241
PVV+ ++ G +RTGKS+L+N+ H
Sbjct: 37 PVVVVAIVGLYRTGKSYLMNHLAGQNH 63
>BC131713-1|AAI31714.1| 633|Homo sapiens guanylate binding protein
family, member 6 protein.
Length = 633
Score = 31.5 bits (68), Expect = 3.3
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +2
Query: 161 PVVLFSVAGPFRTGKSFLLNYFLRYLH 241
PVV+ ++ G +RTGKS+L+N+ H
Sbjct: 37 PVVVVAIVGLYRTGKSYLMNHLAGQNH 63
>AL691464-1|CAI22141.1| 633|Homo sapiens guanylate binding protein
family, member 6 protein.
Length = 633
Score = 31.5 bits (68), Expect = 3.3
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +2
Query: 161 PVVLFSVAGPFRTGKSFLLNYFLRYLH 241
PVV+ ++ G +RTGKS+L+N+ H
Sbjct: 37 PVVVVAIVGLYRTGKSYLMNHLAGQNH 63
>AK131356-1|BAD18509.1| 633|Homo sapiens protein ( Homo sapiens
cDNA FLJ16386 fis, clone TRACH2000862, moderately
similar to Mus musculus putative purine nucleotide
binding protein ).
Length = 633
Score = 31.5 bits (68), Expect = 3.3
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +2
Query: 161 PVVLFSVAGPFRTGKSFLLNYFLRYLH 241
PVV+ ++ G +RTGKS+L+N+ H
Sbjct: 37 PVVVVAIVGLYRTGKSYLMNHLAGQNH 63
>M55543-1|AAA67323.1| 591|Homo sapiens guanylate binding protein
isoform II protein.
Length = 591
Score = 30.3 bits (65), Expect = 7.7
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +2
Query: 161 PVVLFSVAGPFRTGKSFLLN 220
PVV+ ++ G +RTGKS+L+N
Sbjct: 37 PVVVVAIVGLYRTGKSYLMN 56
>CR457062-1|CAG33343.1| 591|Homo sapiens GBP2 protein.
Length = 591
Score = 30.3 bits (65), Expect = 7.7
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +2
Query: 161 PVVLFSVAGPFRTGKSFLLN 220
PVV+ ++ G +RTGKS+L+N
Sbjct: 37 PVVVVAIVGLYRTGKSYLMN 56
>BC073163-1|AAH73163.1| 591|Homo sapiens guanylate binding protein
2, interferon-inducible protein.
Length = 591
Score = 30.3 bits (65), Expect = 7.7
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +2
Query: 161 PVVLFSVAGPFRTGKSFLLN 220
PVV+ ++ G +RTGKS+L+N
Sbjct: 37 PVVVVAIVGLYRTGKSYLMN 56
>BC070055-1|AAH70055.1| 640|Homo sapiens guanylate binding protein
4 protein.
Length = 640
Score = 30.3 bits (65), Expect = 7.7
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +2
Query: 161 PVVLFSVAGPFRTGKSFLLN 220
PVV+ ++ G +RTGKS+L+N
Sbjct: 52 PVVVVAIVGLYRTGKSYLMN 71
>BC063819-1|AAH63819.1| 290|Homo sapiens GBP3 protein protein.
Length = 290
Score = 30.3 bits (65), Expect = 7.7
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +2
Query: 161 PVVLFSVAGPFRTGKSFLLN 220
PVV+ ++ G +RTGKS+L+N
Sbjct: 37 PVVVVAIVGLYRTGKSYLMN 56
>BC031639-1|AAH31639.1| 586|Homo sapiens guanylate binding protein
5 protein.
Length = 586
Score = 30.3 bits (65), Expect = 7.7
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +2
Query: 161 PVVLFSVAGPFRTGKSFLLN 220
PVV+ ++ G +RTGKS+L+N
Sbjct: 37 PVVVVAIVGLYRTGKSYLMN 56
>BC022272-1|AAH22272.1| 481|Homo sapiens GBP2 protein protein.
Length = 481
Score = 30.3 bits (65), Expect = 7.7
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +2
Query: 161 PVVLFSVAGPFRTGKSFLLN 220
PVV+ ++ G +RTGKS+L+N
Sbjct: 37 PVVVVAIVGLYRTGKSYLMN 56
>BC017992-1|AAH17992.1| 449|Homo sapiens Unknown (protein for
IMAGE:4249097) protein.
Length = 449
Score = 30.3 bits (65), Expect = 7.7
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +2
Query: 161 PVVLFSVAGPFRTGKSFLLN 220
PVV+ ++ G +RTGKS+L+N
Sbjct: 37 PVVVVAIVGLYRTGKSYLMN 56
>BC017889-1|AAH17889.1| 410|Homo sapiens Unknown (protein for
IMAGE:4698724) protein.
Length = 410
Score = 30.3 bits (65), Expect = 7.7
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +2
Query: 161 PVVLFSVAGPFRTGKSFLLN 220
PVV+ ++ G +RTGKS+L+N
Sbjct: 52 PVVVVAIVGLYRTGKSYLMN 71
>AY358953-1|AAQ89312.1| 586|Homo sapiens ALEI2427 protein.
Length = 586
Score = 30.3 bits (65), Expect = 7.7
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +2
Query: 161 PVVLFSVAGPFRTGKSFLLN 220
PVV+ ++ G +RTGKS+L+N
Sbjct: 37 PVVVVAIVGLYRTGKSYLMN 56
>AL832576-1|CAD89936.1| 640|Homo sapiens hypothetical protein
protein.
Length = 640
Score = 30.3 bits (65), Expect = 7.7
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +2
Query: 161 PVVLFSVAGPFRTGKSFLLN 220
PVV+ ++ G +RTGKS+L+N
Sbjct: 52 PVVVVAIVGLYRTGKSYLMN 71
>AL832451-1|CAD89925.1| 591|Homo sapiens hypothetical protein
protein.
Length = 591
Score = 30.3 bits (65), Expect = 7.7
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +2
Query: 161 PVVLFSVAGPFRTGKSFLLN 220
PVV+ ++ G +RTGKS+L+N
Sbjct: 37 PVVVVAIVGLYRTGKSYLMN 56
>AL160008-4|CAI22971.1| 440|Homo sapiens guanylate binding protein
3 protein.
Length = 440
Score = 30.3 bits (65), Expect = 7.7
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +2
Query: 161 PVVLFSVAGPFRTGKSFLLN 220
PVV+ ++ G +RTGKS+L+N
Sbjct: 37 PVVVVAIVGLYRTGKSYLMN 56
>AL160008-3|CAI22970.1| 563|Homo sapiens guanylate binding protein
3 protein.
Length = 563
Score = 30.3 bits (65), Expect = 7.7
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +2
Query: 161 PVVLFSVAGPFRTGKSFLLN 220
PVV+ ++ G +RTGKS+L+N
Sbjct: 37 PVVVVAIVGLYRTGKSYLMN 56
>AL160008-2|CAM28327.1| 595|Homo sapiens guanylate binding protein
3 protein.
Length = 595
Score = 30.3 bits (65), Expect = 7.7
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +2
Query: 161 PVVLFSVAGPFRTGKSFLLN 220
PVV+ ++ G +RTGKS+L+N
Sbjct: 37 PVVVVAIVGLYRTGKSYLMN 56
>AL139416-8|CAI21698.1| 440|Homo sapiens guanylate binding protein
3 protein.
Length = 440
Score = 30.3 bits (65), Expect = 7.7
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +2
Query: 161 PVVLFSVAGPFRTGKSFLLN 220
PVV+ ++ G +RTGKS+L+N
Sbjct: 37 PVVVVAIVGLYRTGKSYLMN 56
>AL139416-7|CAI21697.1| 563|Homo sapiens guanylate binding protein
3 protein.
Length = 563
Score = 30.3 bits (65), Expect = 7.7
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +2
Query: 161 PVVLFSVAGPFRTGKSFLLN 220
PVV+ ++ G +RTGKS+L+N
Sbjct: 37 PVVVVAIVGLYRTGKSYLMN 56
>AL139416-6|CAM28262.1| 595|Homo sapiens guanylate binding protein
3 protein.
Length = 595
Score = 30.3 bits (65), Expect = 7.7
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +2
Query: 161 PVVLFSVAGPFRTGKSFLLN 220
PVV+ ++ G +RTGKS+L+N
Sbjct: 37 PVVVVAIVGLYRTGKSYLMN 56
>AK131094-1|BAC85144.1| 649|Homo sapiens FLJ00316 protein protein.
Length = 649
Score = 30.3 bits (65), Expect = 7.7
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +2
Query: 161 PVVLFSVAGPFRTGKSFLLN 220
PVV+ ++ G +RTGKS+L+N
Sbjct: 61 PVVVVAIVGLYRTGKSYLMN 80
>AK096141-1|BAC04709.1| 638|Homo sapiens protein ( Homo sapiens
cDNA FLJ38822 fis, clone LIVER2008706, moderately
similar to Mus musculus purine nucleotide binding
protein mRNA. ).
Length = 638
Score = 30.3 bits (65), Expect = 7.7
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +2
Query: 161 PVVLFSVAGPFRTGKSFLLN 220
PVV+ ++ G +RTGKS+L+N
Sbjct: 37 PVVVVAIVGLYRTGKSYLMN 56
>AK090479-1|BAC03460.1| 504|Homo sapiens FLJ00401 protein protein.
Length = 504
Score = 30.3 bits (65), Expect = 7.7
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +2
Query: 161 PVVLFSVAGPFRTGKSFLLN 220
PVV+ ++ G +RTGKS+L+N
Sbjct: 58 PVVVVAIVGLYRTGKSYLMN 77
>AF430643-1|AAN39036.1| 586|Homo sapiens GBP-5a protein.
Length = 586
Score = 30.3 bits (65), Expect = 7.7
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +2
Query: 161 PVVLFSVAGPFRTGKSFLLN 220
PVV+ ++ G +RTGKS+L+N
Sbjct: 37 PVVVVAIVGLYRTGKSYLMN 56
>AF430642-1|AAN39035.1| 586|Homo sapiens GBP-5b protein.
Length = 586
Score = 30.3 bits (65), Expect = 7.7
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +2
Query: 161 PVVLFSVAGPFRTGKSFLLN 220
PVV+ ++ G +RTGKS+L+N
Sbjct: 37 PVVVVAIVGLYRTGKSYLMN 56
>AF328727-1|AAO40731.1| 489|Homo sapiens CTCL tumor antigen GBP-5ta
protein.
Length = 489
Score = 30.3 bits (65), Expect = 7.7
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +2
Query: 161 PVVLFSVAGPFRTGKSFLLN 220
PVV+ ++ G +RTGKS+L+N
Sbjct: 37 PVVVVAIVGLYRTGKSYLMN 56
>AF288815-1|AAL02055.1| 586|Homo sapiens guanylate binding protein
5 protein.
Length = 586
Score = 30.3 bits (65), Expect = 7.7
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +2
Query: 161 PVVLFSVAGPFRTGKSFLLN 220
PVV+ ++ G +RTGKS+L+N
Sbjct: 37 PVVVVAIVGLYRTGKSYLMN 56
>AF288814-1|AAL02054.1| 640|Homo sapiens guanylate binding protein
4 protein.
Length = 640
Score = 30.3 bits (65), Expect = 7.7
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +2
Query: 161 PVVLFSVAGPFRTGKSFLLN 220
PVV+ ++ G +RTGKS+L+N
Sbjct: 52 PVVVVAIVGLYRTGKSYLMN 71
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,210,717
Number of Sequences: 237096
Number of extensions: 2320859
Number of successful extensions: 5692
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 5421
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5688
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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