Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00294
(751 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF303255-1|AAG50213.1| 573|Caenorhabditis elegans putative guan... 110 9e-25
AC024817-8|AAU05551.1| 535|Caenorhabditis elegans Hypothetical ... 110 9e-25
AC024817-7|AAK68527.1| 573|Caenorhabditis elegans Hypothetical ... 110 9e-25
Z95559-2|CAB09000.3| 520|Caenorhabditis elegans Hypothetical pr... 83 3e-16
AY305841-1|AAR11986.1| 147|Caenorhabditis elegans nuclear recep... 32 0.38
AF024495-1|AAB70338.3| 399|Caenorhabditis elegans Nuclear hormo... 32 0.38
U97005-13|AAB52290.1| 868|Caenorhabditis elegans Hypothetical p... 30 1.5
U97005-12|AAB52289.1| 1121|Caenorhabditis elegans Hypothetical p... 30 1.5
U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z81106-5|CAB03223.3| 432|Caenorhabditis elegans Hypothetical pr... 29 3.5
U20864-3|AAC46662.1| 574|Caenorhabditis elegans Hypothetical pr... 29 3.5
AL033536-12|CAD45609.2| 432|Caenorhabditis elegans Hypothetical... 29 3.5
U61946-10|AAC24388.1| 1827|Caenorhabditis elegans Hypothetical p... 28 8.1
U41542-6|AAK39152.1| 493|Caenorhabditis elegans Protein disulfi... 28 8.1
>AF303255-1|AAG50213.1| 573|Caenorhabditis elegans putative
guanylate-binding protein protein.
Length = 573
Score = 110 bits (265), Expect = 9e-25
Identities = 50/80 (62%), Positives = 68/80 (85%)
Frame = +1
Query: 268 DNAKPLGEDSEPLGGFTWRGGSERNTVGLLIWSEPIIKTLENGDKVAVLLMDTQGLFDSK 447
DN++ + +S PL GF+WRGGSER+T G+LIWSEP I +NG+++AVLLMDTQG FDS+
Sbjct: 107 DNSQWMSPNS-PLSGFSWRGGSERDTNGILIWSEPFIMKDKNGEEIAVLLMDTQGAFDSQ 165
Query: 448 TTMRDCSIIFALSTLLSSVQ 507
+T++DC+ IFALST++SSVQ
Sbjct: 166 STVKDCATIFALSTMISSVQ 185
Score = 71.7 bits (168), Expect = 5e-13
Identities = 32/69 (46%), Positives = 47/69 (68%)
Frame = +3
Query: 510 YNLKENLQENHLQFLQLFTQYAKAADNGEELKSFQNLLFLIRDWSYYDTHPYGSKGGDSL 689
YNL +N+QE+ LQ LQLFT+Y + A K FQ+LLFL+RDWS+ +G +GG +
Sbjct: 187 YNLSQNIQEDDLQHLQLFTEYGRLALEDSASKPFQSLLFLVRDWSFPYEAEFGFQGGQRV 246
Query: 690 VAKRFEVTK 716
+ +R EV++
Sbjct: 247 LDRRLEVSE 255
Score = 52.0 bits (119), Expect = 4e-07
Identities = 25/49 (51%), Positives = 32/49 (65%)
Frame = +2
Query: 92 DGSFDLDVVALQSVLNRDDVKDLPVVLFSVAGPFRTGKSFLLNYFLRYL 238
D SF+L+ L+ +L V D V + VAG +R GKSFLLN+FLRYL
Sbjct: 43 DHSFELNTELLEKILLDPKVADKKVAVIGVAGAYRKGKSFLLNFFLRYL 91
>AC024817-8|AAU05551.1| 535|Caenorhabditis elegans Hypothetical
protein Y54G2A.2b protein.
Length = 535
Score = 110 bits (265), Expect = 9e-25
Identities = 50/80 (62%), Positives = 68/80 (85%)
Frame = +1
Query: 268 DNAKPLGEDSEPLGGFTWRGGSERNTVGLLIWSEPIIKTLENGDKVAVLLMDTQGLFDSK 447
DN++ + +S PL GF+WRGGSER+T G+LIWSEP I +NG+++AVLLMDTQG FDS+
Sbjct: 107 DNSQWMSPNS-PLSGFSWRGGSERDTNGILIWSEPFIMKDKNGEEIAVLLMDTQGAFDSQ 165
Query: 448 TTMRDCSIIFALSTLLSSVQ 507
+T++DC+ IFALST++SSVQ
Sbjct: 166 STVKDCATIFALSTMISSVQ 185
Score = 71.7 bits (168), Expect = 5e-13
Identities = 32/69 (46%), Positives = 47/69 (68%)
Frame = +3
Query: 510 YNLKENLQENHLQFLQLFTQYAKAADNGEELKSFQNLLFLIRDWSYYDTHPYGSKGGDSL 689
YNL +N+QE+ LQ LQLFT+Y + A K FQ+LLFL+RDWS+ +G +GG +
Sbjct: 187 YNLSQNIQEDDLQHLQLFTEYGRLALEDSASKPFQSLLFLVRDWSFPYEAEFGFQGGQRV 246
Query: 690 VAKRFEVTK 716
+ +R EV++
Sbjct: 247 LDRRLEVSE 255
Score = 52.0 bits (119), Expect = 4e-07
Identities = 25/49 (51%), Positives = 32/49 (65%)
Frame = +2
Query: 92 DGSFDLDVVALQSVLNRDDVKDLPVVLFSVAGPFRTGKSFLLNYFLRYL 238
D SF+L+ L+ +L V D V + VAG +R GKSFLLN+FLRYL
Sbjct: 43 DHSFELNTELLEKILLDPKVADKKVAVIGVAGAYRKGKSFLLNFFLRYL 91
>AC024817-7|AAK68527.1| 573|Caenorhabditis elegans Hypothetical
protein Y54G2A.2a protein.
Length = 573
Score = 110 bits (265), Expect = 9e-25
Identities = 50/80 (62%), Positives = 68/80 (85%)
Frame = +1
Query: 268 DNAKPLGEDSEPLGGFTWRGGSERNTVGLLIWSEPIIKTLENGDKVAVLLMDTQGLFDSK 447
DN++ + +S PL GF+WRGGSER+T G+LIWSEP I +NG+++AVLLMDTQG FDS+
Sbjct: 107 DNSQWMSPNS-PLSGFSWRGGSERDTNGILIWSEPFIMKDKNGEEIAVLLMDTQGAFDSQ 165
Query: 448 TTMRDCSIIFALSTLLSSVQ 507
+T++DC+ IFALST++SSVQ
Sbjct: 166 STVKDCATIFALSTMISSVQ 185
Score = 71.7 bits (168), Expect = 5e-13
Identities = 32/69 (46%), Positives = 47/69 (68%)
Frame = +3
Query: 510 YNLKENLQENHLQFLQLFTQYAKAADNGEELKSFQNLLFLIRDWSYYDTHPYGSKGGDSL 689
YNL +N+QE+ LQ LQLFT+Y + A K FQ+LLFL+RDWS+ +G +GG +
Sbjct: 187 YNLSQNIQEDDLQHLQLFTEYGRLALEDSASKPFQSLLFLVRDWSFPYEAEFGFQGGQRV 246
Query: 690 VAKRFEVTK 716
+ +R EV++
Sbjct: 247 LDRRLEVSE 255
Score = 52.0 bits (119), Expect = 4e-07
Identities = 25/49 (51%), Positives = 32/49 (65%)
Frame = +2
Query: 92 DGSFDLDVVALQSVLNRDDVKDLPVVLFSVAGPFRTGKSFLLNYFLRYL 238
D SF+L+ L+ +L V D V + VAG +R GKSFLLN+FLRYL
Sbjct: 43 DHSFELNTELLEKILLDPKVADKKVAVIGVAGAYRKGKSFLLNFFLRYL 91
>Z95559-2|CAB09000.3| 520|Caenorhabditis elegans Hypothetical
protein Y41E3.3 protein.
Length = 520
Score = 82.6 bits (195), Expect = 3e-16
Identities = 38/83 (45%), Positives = 55/83 (66%)
Frame = +1
Query: 259 EKGDNAKPLGEDSEPLGGFTWRGGSERNTVGLLIWSEPIIKTLENGDKVAVLLMDTQGLF 438
++ D++ D L GF WR G +R+TVG+ +W EPI+ G+ AV+LMDTQG F
Sbjct: 95 QQSDSSLEWLTDDCQLHGFHWRAGVKRDTVGIWLWGEPIMIESVTGEMFAVVLMDTQGTF 154
Query: 439 DSKTTMRDCSIIFALSTLLSSVQ 507
D+ +T + C +FALST++SSVQ
Sbjct: 155 DNNSTYQQCMTVFALSTIVSSVQ 177
Score = 54.8 bits (126), Expect = 6e-08
Identities = 27/50 (54%), Positives = 33/50 (66%)
Frame = +2
Query: 95 GSFDLDVVALQSVLNRDDVKDLPVVLFSVAGPFRTGKSFLLNYFLRYLHS 244
G F L+ AL SVL + +V+ SVAG FR GKSFLLN+FL YL+S
Sbjct: 41 GKFRLNESALNSVLGHSACANKKIVIISVAGAFRKGKSFLLNFFLEYLYS 90
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Frame = +3
Query: 510 YNLKENLQENHLQFLQLFTQYAKAADNGEEL--KSFQNLLFLIRDWSYYDTHPYGSKGG 680
YN+ +N+QE+ LQ L LF +Y + A K FQ L+F +RD+ + + +G GG
Sbjct: 179 YNVVDNIQEDALQHLSLFVEYGRIAMEQPHNFGKPFQQLVFCVRDFKNQEEYEFGENGG 237
>AY305841-1|AAR11986.1| 147|Caenorhabditis elegans nuclear receptor
NHR-125 protein.
Length = 147
Score = 32.3 bits (70), Expect = 0.38
Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = +3
Query: 315 HVARWI*AQHCRSLDLVGTYHK-NP*E 392
HV R++ QHCR D++GT K NP E
Sbjct: 16 HVRRYLSVQHCREFDILGTLRKLNPSE 42
>AF024495-1|AAB70338.3| 399|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 125 protein.
Length = 399
Score = 32.3 bits (70), Expect = 0.38
Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = +3
Query: 315 HVARWI*AQHCRSLDLVGTYHK-NP*E 392
HV R++ QHCR D++GT K NP E
Sbjct: 268 HVRRYLSVQHCREFDILGTLRKLNPSE 294
>U97005-13|AAB52290.1| 868|Caenorhabditis elegans Hypothetical
protein F19F10.11b protein.
Length = 868
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/63 (30%), Positives = 32/63 (50%)
Frame = -3
Query: 452 VVLLSNKPCVSINSTATLSPFSRVFMIGSDQIKRPTVLRSDPPRHVKPPRGSESSPKGLA 273
++L+ + P + NSTA+ S FSR + G + R T+ ++D K S PK +
Sbjct: 43 MILVPDDPMLPGNSTASTSNFSREELPGPSDVVR-TISKNDLMMSRKTAAPSSCPPKEQS 101
Query: 272 LSP 264
+ P
Sbjct: 102 MKP 104
>U97005-12|AAB52289.1| 1121|Caenorhabditis elegans Hypothetical
protein F19F10.11a protein.
Length = 1121
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/63 (30%), Positives = 32/63 (50%)
Frame = -3
Query: 452 VVLLSNKPCVSINSTATLSPFSRVFMIGSDQIKRPTVLRSDPPRHVKPPRGSESSPKGLA 273
++L+ + P + NSTA+ S FSR + G + R T+ ++D K S PK +
Sbjct: 43 MILVPDDPMLPGNSTASTSNFSREELPGPSDVVR-TISKNDLMMSRKTAAPSSCPPKEQS 101
Query: 272 LSP 264
+ P
Sbjct: 102 MKP 104
>U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical
protein F59A6.3 protein.
Length = 786
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/60 (26%), Positives = 29/60 (48%)
Frame = -2
Query: 267 TLFSLKTGECRYLKK*FSRNDFPVRNGPATLNNTTGKSLTSSRFSTLCNATTSKSNEPSS 88
T +L +G + S +D P GP+T + +T + + S FST ++ S + S+
Sbjct: 338 TTSALTSGGTSTTSRASSASDDPTTTGPSTTSGSTASTTSGSLFSTSLGSSQSPGSSVST 397
>Z81106-5|CAB03223.3| 432|Caenorhabditis elegans Hypothetical
protein R06C1.6 protein.
Length = 432
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +3
Query: 438 RQQNHDERLLHHFRSVHAPVFSSGYNLKENLQENHLQFLQLFTQYAKAADN 590
+QQ E+ LHH H+ S + +EN +E H + LF + A N
Sbjct: 56 QQQQQHEQQLHHLPGYHSAGQSRVMSEEENEREKHAKISVLFEEIRIEAAN 106
>U20864-3|AAC46662.1| 574|Caenorhabditis elegans Hypothetical
protein F32A5.3 protein.
Length = 574
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/45 (33%), Positives = 17/45 (37%)
Frame = +1
Query: 331 SERNTVGLLIWSEPIIKTLENGDKVAVLLMDTQGLFDSKTTMRDC 465
S N G W+E + N D V L Q D K T DC
Sbjct: 357 SNDNQFGYFCWNEDAVSKYLNSDNVQNALNIPQAWKDQKNTWEDC 401
>AL033536-12|CAD45609.2| 432|Caenorhabditis elegans Hypothetical
protein R06C1.6 protein.
Length = 432
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +3
Query: 438 RQQNHDERLLHHFRSVHAPVFSSGYNLKENLQENHLQFLQLFTQYAKAADN 590
+QQ E+ LHH H+ S + +EN +E H + LF + A N
Sbjct: 56 QQQQQHEQQLHHLPGYHSAGQSRVMSEEENEREKHAKISVLFEEIRIEAAN 106
>U61946-10|AAC24388.1| 1827|Caenorhabditis elegans Hypothetical
protein F47C12.1 protein.
Length = 1827
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -2
Query: 180 TLNNTTGKSLTSSRFSTLCNATTSKSNEPSSLYL 79
T TTG+SL SS F C+A ++N S+++
Sbjct: 1655 TATQTTGESLESSCFPIDCSAKMCENNAECSVFM 1688
>U41542-6|AAK39152.1| 493|Caenorhabditis elegans Protein disulfide
isomerase protein2, isoform a protein.
Length = 493
Score = 27.9 bits (59), Expect = 8.1
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +3
Query: 516 LKENLQENHLQFLQLFTQYAKAADNGEELKSFQNLLFLIRDWSYY 650
LK +Q N L + FTQ + G E+KS NLLF+ ++ S +
Sbjct: 221 LKTWIQANRLALVSEFTQETASVIFGGEIKS-HNLLFVSKESSEF 264
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,044,314
Number of Sequences: 27780
Number of extensions: 364579
Number of successful extensions: 1099
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1033
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1098
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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