Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00293
         (748 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    24   1.5  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   3.4  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   3.4  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    22   6.0  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 11/41 (26%), Positives = 21/41 (51%)
 Frame = -2

Query: 618 VYYHVINDHIIRILHSFRGHKRLLIMLIVHNSNCRNTITQI 496
           VYYH I    + + +S  G++ LLI   + +    +T+  +
Sbjct: 354 VYYHRILGETVDLFNSLFGYQTLLITFHIGSQLVLHTVKTV 394


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 13/43 (30%), Positives = 17/43 (39%)
 Frame = +2

Query: 107 CYIREFDGVLPFDSVTYSKEAECTRYFCAHDAVIHQSCKDELG 235
           CY     G     S+  S++ +C RY  A D        D LG
Sbjct: 616 CYHAVAPGTDIRQSIALSRKKKCIRYMEAGDGNDGNQSDDNLG 658


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 13/43 (30%), Positives = 17/43 (39%)
 Frame = +2

Query: 107 CYIREFDGVLPFDSVTYSKEAECTRYFCAHDAVIHQSCKDELG 235
           CY     G     S+  S++ +C RY  A D        D LG
Sbjct: 508 CYHAVAPGTDIRQSIALSRKKKCIRYMEAGDGNDGNQSDDNLG 550


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +1

Query: 592 MIINNVIIYRKRSFNYIYDSQI 657
           +++N V ++RKR  NY  DS I
Sbjct: 88  IVVNIVHVFRKRRVNY-KDSNI 108


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,631
Number of Sequences: 336
Number of extensions: 3769
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)