Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00291
         (786 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    28   0.097
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    22   6.4  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   8.4  

>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 27.9 bits (59), Expect = 0.097
 Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
 Frame = +1

Query: 547 VLRRYIKEYVTCHTCRSPDTILQKDTRLFFLQ--CETCG 657
           +L  +I+++V C  C +P+T L   T+   +   C+ CG
Sbjct: 2   LLDGFIRKFVLCPECENPETELLVSTKRSTISQGCKACG 40


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
          vasopressin-like peptide protein.
          Length = 146

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 7  RRRRFSISEN*KMPCL 54
          +R +F+ISEN   PC+
Sbjct: 31 KRSKFAISENAVKPCV 46


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -2

Query: 287 LVLEVRHMSNHITSNPFTVLIFHIFLI 207
           LV + RH  N I  +    + F++FL+
Sbjct: 174 LVEKYRHQKNFINESNVETVKFNLFLL 200


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,067
Number of Sequences: 336
Number of extensions: 3898
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21272645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)